RNA–Protein interactions for RNA: ENSMUST00000032842.12

Ccdc90b-201, Transcript of Coiled-coil domain-containing protein 90B, mitochondrial, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc90b, Length 1,596 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc90b-201ENSMUST00000032842 Myt1lP97500 1187 aa23.52■■□□□ 1.36
Ccdc90b-201ENSMUST00000032842 Cc2d2bA0A286YDU8 1405 aa23.5■■□□□ 1.35
Ccdc90b-201ENSMUST00000032842 Carmil1Q6EDY6 1374 aa23.47■■□□□ 1.35
Ccdc90b-201ENSMUST00000032842 Clip1Q922J3 1391 aa23.43■■□□□ 1.34
Ccdc90b-201ENSMUST00000032842 EprsQ8CGC7 1512 aaKnown RBP23.39■■□□□ 1.34
Ccdc90b-201ENSMUST00000032842 WizO88286 1684 aaKnown RBP23.37■■□□□ 1.33
Ccdc90b-201ENSMUST00000032842 Adamts12Q811B3 1600 aa23.34■■□□□ 1.33
Ccdc90b-201ENSMUST00000032842 Abca16E9PWJ7 1678 aa23.34■■□□□ 1.33
Ccdc90b-201ENSMUST00000032842 Cux1P53564 1515 aa23.34■■□□□ 1.33
Ccdc90b-201ENSMUST00000032842 TchhA0A0B4J1F9 1599 aa23.31■■□□□ 1.32
Ccdc90b-201ENSMUST00000032842 Polr1aO35134 1717 aaKnown RBP23.31■■□□□ 1.32
Ccdc90b-201ENSMUST00000032842 PxdnQ3UQ28 1475 aa23.29■■□□□ 1.32
Ccdc90b-201ENSMUST00000032842 Ankrd26Q811D2 1581 aa23.28■■□□□ 1.32
Ccdc90b-201ENSMUST00000032842 Plppr3Q7TPB0 716 aa23.28■■□□□ 1.32
Ccdc90b-201ENSMUST00000032842 Abcc2Q8VI47 1543 aa23.24■■□□□ 1.31
Ccdc90b-201ENSMUST00000032842 CadpsQ80TJ1 1355 aa23.23■■□□□ 1.31
Ccdc90b-201ENSMUST00000032842 Gm7298A0A0N4SVU1 1476 aa23.21■■□□□ 1.31
Ccdc90b-201ENSMUST00000032842 Abca5Q8K448 1642 aa23.2■■□□□ 1.3
Ccdc90b-201ENSMUST00000032842 Erich3F6QRE9 1637 aa23.19■■□□□ 1.3
Ccdc90b-201ENSMUST00000032842 Rpap1Q80TE0 1409 aa23.19■■□□□ 1.3
Ccdc90b-201ENSMUST00000032842 Fyco1Q8VDC1 1437 aa23.19■■□□□ 1.3
Ccdc90b-201ENSMUST00000032842 Fgd6Q69ZL1 1399 aa23.16■■□□□ 1.3
Ccdc90b-201ENSMUST00000032842 Setd5Q5XJV7 1441 aa23.14■■□□□ 1.3
Ccdc90b-201ENSMUST00000032842 Dnmt1P13864 1620 aaKnown RBP23.14■■□□□ 1.29
Ccdc90b-201ENSMUST00000032842 Soga1E1U8D0 1418 aa23.13■■□□□ 1.29
Ccdc90b-201ENSMUST00000032842 Arhgap27A2AB59 869 aa23.13■■□□□ 1.29
Ccdc90b-201ENSMUST00000032842 Eea1Q8BL66 1411 aa23.13■■□□□ 1.29
Ccdc90b-201ENSMUST00000032842 Map3k4O08648 1597 aa23.13■■□□□ 1.29
Ccdc90b-201ENSMUST00000032842 Shroom2A2ALU4 1481 aa23.12■■□□□ 1.29
Ccdc90b-201ENSMUST00000032842 BC005561E9Q5E2 1589 aa23.1■■□□□ 1.29
Ccdc90b-201ENSMUST00000032842 Lmo7E9PYF4 1699 aaKnown RBP23.09■■□□□ 1.29
Ccdc90b-201ENSMUST00000032842 Arap1Q4LDD4 1452 aa23.09■■□□□ 1.29
Ccdc90b-201ENSMUST00000032842 Pcf11G3X9Z4 1553 aa23.06■■□□□ 1.28
Ccdc90b-201ENSMUST00000032842 AknaQ80VW7 1404 aa23.05■■□□□ 1.28
Ccdc90b-201ENSMUST00000032842 Slx4Q6P1D7 1565 aa23.03■■□□□ 1.28
Ccdc90b-201ENSMUST00000032842 Ap3b1Q9Z1T1 1105 aa23.02■■□□□ 1.28
Ccdc90b-201ENSMUST00000032842 Neo1P97798 1493 aa23.02■■□□□ 1.27
Ccdc90b-201ENSMUST00000032842 Arhgef5E9Q7D5 1581 aa22.98■■□□□ 1.27
Ccdc90b-201ENSMUST00000032842 WrnO09053 1401 aa22.98■■□□□ 1.27
Ccdc90b-201ENSMUST00000032842 Pabpn1Q8CCS6 302 aaKnown RBP22.97■■□□□ 1.27
Ccdc90b-201ENSMUST00000032842 Abcc1O35379 1528 aa22.97■■□□□ 1.27
Ccdc90b-201ENSMUST00000032842 Pelp1Q9DBD5 1123 aaKnown RBP22.97■■□□□ 1.27
Ccdc90b-201ENSMUST00000032842 Zcchc11B2RX14 1644 aaKnown RBP22.95■■□□□ 1.27
Ccdc90b-201ENSMUST00000032842 Chd1P40201 1711 aa22.95■■□□□ 1.26
Ccdc90b-201ENSMUST00000032842 BlmO88700 1416 aa22.95■■□□□ 1.26
Ccdc90b-201ENSMUST00000032842 Aebp1Q640N1 1128 aa22.94■■□□□ 1.26
Ccdc90b-201ENSMUST00000032842 Arhgef12Q8R4H2 1543 aaKnown RBP22.87■■□□□ 1.25
Ccdc90b-201ENSMUST00000032842 Tiam1Q60610 1591 aa22.85■■□□□ 1.25
Ccdc90b-201ENSMUST00000032842 Gm14025A2AP89 1413 aa22.84■■□□□ 1.25
Ccdc90b-201ENSMUST00000032842 Ehmt2Q9Z148 1263 aaKnown RBP22.84■■□□□ 1.25
Ccdc90b-201ENSMUST00000032842 Jph4Q80WT0 628 aa22.83■■□□□ 1.25
Ccdc90b-201ENSMUST00000032842 CntlnA2AM05 1397 aa22.83■■□□□ 1.24
Ccdc90b-201ENSMUST00000032842 Naip1Q9QWK5 1403 aa22.82■■□□□ 1.24
Ccdc90b-201ENSMUST00000032842 Peg3Q3URU2 1571 aa22.81■■□□□ 1.24
Ccdc90b-201ENSMUST00000032842 Kif27Q7M6Z4 1394 aa22.8■■□□□ 1.24
Ccdc90b-201ENSMUST00000032842 Plekhg3Q4VAC9 1341 aa22.79■■□□□ 1.24
Ccdc90b-201ENSMUST00000032842 Gapvd1Q6PAR5 1458 aa22.79■■□□□ 1.24
Ccdc90b-201ENSMUST00000032842 Rapgef6Q5NCJ1 1609 aa22.79■■□□□ 1.24
Ccdc90b-201ENSMUST00000032842 Rrbp1Q99PL5 1605 aaKnown RBP22.79■■□□□ 1.24
Ccdc90b-201ENSMUST00000032842 Cep170Q6A065 1588 aa22.75■■□□□ 1.23
Ccdc90b-201ENSMUST00000032842 Arhgap31A6X8Z5 1425 aa22.75■■□□□ 1.23
Ccdc90b-201ENSMUST00000032842 Ythdc2B2RR83 1445 aaKnown RBP22.75■■□□□ 1.23
Ccdc90b-201ENSMUST00000032842 Gm1043A0A140LJC2 1431 aa22.74■■□□□ 1.23
Ccdc90b-201ENSMUST00000032842 Ccdc141E9Q8Q6 1531 aa22.73■■□□□ 1.23
Ccdc90b-201ENSMUST00000032842 PtprtQ99M80 1454 aa22.72■■□□□ 1.23
Ccdc90b-201ENSMUST00000032842 Mroh2aD3Z750 1679 aa22.7■■□□□ 1.22
Ccdc90b-201ENSMUST00000032842 Col17a1Q07563 1470 aa22.7■■□□□ 1.22
Ccdc90b-201ENSMUST00000032842 Lmod2Q3UHZ5 550 aa22.7■■□□□ 1.22
Ccdc90b-201ENSMUST00000032842 Fkbp15Q6P9Q6 1216 aaKnown RBP22.69■■□□□ 1.22
Ccdc90b-201ENSMUST00000032842 Arhgef11Q68FM7 1552 aa22.67■■□□□ 1.22
Ccdc90b-201ENSMUST00000032842 Ncoa2Q61026 1462 aa22.64■■□□□ 1.21
Ccdc90b-201ENSMUST00000032842 Kdm5bQ80Y84 1544 aa22.63■■□□□ 1.21
Ccdc90b-201ENSMUST00000032842 Cul7Q8VE73 1689 aa22.62■■□□□ 1.21
Ccdc90b-201ENSMUST00000032842 Ncoa3O09000 1398 aa22.61■■□□□ 1.21
Ccdc90b-201ENSMUST00000032842 Mug1P28665 1476 aa22.6■■□□□ 1.21
Ccdc90b-201ENSMUST00000032842 Gcc2Q8CHG3 1679 aa22.59■■□□□ 1.21
Ccdc90b-201ENSMUST00000032842 Adgrl3Q80TS3 1537 aa22.58■■□□□ 1.2
Ccdc90b-201ENSMUST00000032842 Magi1Q6RHR9 1471 aa22.57■■□□□ 1.2
Ccdc90b-201ENSMUST00000032842 NhsB1AV60 1647 aa22.56■■□□□ 1.2
Ccdc90b-201ENSMUST00000032842 NexmifQ5DTT1 1515 aa22.56■■□□□ 1.2
Ccdc90b-201ENSMUST00000032842 Cdc42bpaQ3UU96 1719 aa22.56■■□□□ 1.2
Ccdc90b-201ENSMUST00000032842 Gm156Q58A37 223 aa22.55■■□□□ 1.2
Ccdc90b-201ENSMUST00000032842 AI481877A2ALV5 1481 aa22.54■■□□□ 1.2
Ccdc90b-201ENSMUST00000032842 Prex2Q3LAC4 1598 aa22.54■■□□□ 1.2
Ccdc90b-201ENSMUST00000032842 Fancd2Q80V62 1450 aa22.52■■□□□ 1.2
Ccdc90b-201ENSMUST00000032842 Kiaa1551Q5DTW7 1521 aa22.52■■□□□ 1.2
Ccdc90b-201ENSMUST00000032842 Lmtk2Q3TYD6 1471 aa22.49■■□□□ 1.19
Ccdc90b-201ENSMUST00000032842 UbtfP25976 765 aaKnown RBP22.48■■□□□ 1.19
Ccdc90b-201ENSMUST00000032842 Ifnlr1Q8CGK5 535 aa22.46■■□□□ 1.19
Ccdc90b-201ENSMUST00000032842 Znf608Q56A10 1511 aa22.46■■□□□ 1.19
Ccdc90b-201ENSMUST00000032842 Kiaa1210E9Q0C6 1637 aa22.46■■□□□ 1.19
Ccdc90b-201ENSMUST00000032842 Dhx57Q6P5D3 1388 aaKnown RBP22.45■■□□□ 1.18
Ccdc90b-201ENSMUST00000032842 Mapkbp1Q6NS57 1503 aa22.45■■□□□ 1.18
Ccdc90b-201ENSMUST00000032842 Fam163aQ8CAA5 168 aa22.45■■□□□ 1.18
Ccdc90b-201ENSMUST00000032842 Lrrc9Q8CDN9 1456 aa22.44■■□□□ 1.18
Ccdc90b-201ENSMUST00000032842 Igf1rQ60751 1373 aa22.44■■□□□ 1.18
Ccdc90b-201ENSMUST00000032842 Ccnb3Q810T2 1396 aa22.43■■□□□ 1.18
Ccdc90b-201ENSMUST00000032842 Setbp1Q9Z180 1582 aa22.42■■□□□ 1.18
Ccdc90b-201ENSMUST00000032842 Atp10dQ8K2X1 1416 aa22.4■■□□□ 1.18
Ccdc90b-201ENSMUST00000032842 Wdr7Q920I9 1489 aa22.4■■□□□ 1.18
Retrieved 100 of 22,080 RNA–protein pairs in 29.5 ms