RNA–Protein interactions for RNA: ENSMUST00000031971.12

Ssbp1-201, Transcript of Single-stranded DNA-binding protein, mitochondrial, mousemouse

TSL 1 (best) BASIC

Gene Ssbp1, Length 1,063 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp1-201ENSMUST00000031971 Rb1cc1Q9ESK9 1588 aa14.9□□□□□ -0.02
Ssbp1-201ENSMUST00000031971 BicraF8VPZ9 1578 aa14.86□□□□□ -0.03
Ssbp1-201ENSMUST00000031971 Rhox8Q6VSS7 320 aa14.86□□□□□ -0.03
Ssbp1-201ENSMUST00000031971 CrebzfQ91ZR3 358 aa14.8□□□□□ -0.04
Ssbp1-201ENSMUST00000031971 TMEM121BQ99MX7 572 aa14.75□□□□□ -0.05
Ssbp1-201ENSMUST00000031971 Rnf225Q9D7D1 332 aa14.73□□□□□ -0.05
Ssbp1-201ENSMUST00000031971 Krtap4-1Q3UUY3 169 aa14.7□□□□□ -0.06
Ssbp1-201ENSMUST00000031971 Baz1aO88379 1555 aa14.69□□□□□ -0.06
Ssbp1-201ENSMUST00000031971 PygbQ8CI94 843 aaKnown RBP14.69□□□□□ -0.06
Ssbp1-201ENSMUST00000031971 OsbpQ3B7Z2 805 aa14.62□□□□□ -0.07
Ssbp1-201ENSMUST00000031971 Dcbld2Q91ZV3 769 aa14.62□□□□□ -0.07
Ssbp1-201ENSMUST00000031971 Ccdc180J3QNE4 1664 aa14.61□□□□□ -0.07
Ssbp1-201ENSMUST00000031971 Dmrta2A2A9A2 531 aa14.56□□□□□ -0.08
Ssbp1-201ENSMUST00000031971 Pde4dQ01063 747 aa14.55□□□□□ -0.08
Ssbp1-201ENSMUST00000031971 Zbtb7bQ64321 544 aa14.55□□□□□ -0.08
Ssbp1-201ENSMUST00000031971 Crybg2B7ZCC2 1516 aa14.55□□□□□ -0.08
Ssbp1-201ENSMUST00000031971 Repin1Q5U4E2 545 aa14.48□□□□□ -0.09
Ssbp1-201ENSMUST00000031971 Atad2Q8CDM1 1040 aa14.48□□□□□ -0.09
Ssbp1-201ENSMUST00000031971 Hdac5Q9Z2V6 1113 aa14.48□□□□□ -0.09
Ssbp1-201ENSMUST00000031971 Zcchc6Q5BLK4 1491 aaKnown RBP14.46□□□□□ -0.09
Ssbp1-201ENSMUST00000031971 Gm45233A0A0N4SVE0 221 aa14.46□□□□□ -0.09
Ssbp1-201ENSMUST00000031971 MycnP03966 462 aaKnown RBP14.46□□□□□ -0.09
Ssbp1-201ENSMUST00000031971 Znf516Q7TSH3 1157 aa14.44□□□□□ -0.1
Ssbp1-201ENSMUST00000031971 Fam117bQ3U3E2 584 aa14.38□□□□□ -0.11
Ssbp1-201ENSMUST00000031971 Pdap1Q3UHX2 181 aaKnown RBP14.38□□□□□ -0.11
Ssbp1-201ENSMUST00000031971 Gm13697A2AK42 830 aa14.35□□□□□ -0.11
Ssbp1-201ENSMUST00000031971 Ndufv2Q9D6J6 248 aa14.32□□□□□ -0.12
Ssbp1-201ENSMUST00000031971 Smarca2Q6DIC0 1577 aa14.31□□□□□ -0.12
Ssbp1-201ENSMUST00000031971 ZxdbA2CE44 873 aa14.29□□□□□ -0.12
Ssbp1-201ENSMUST00000031971 Cecr2E9Q2Z1 1453 aa14.29□□□□□ -0.12
Ssbp1-201ENSMUST00000031971 Pds5bQ4VA53 1446 aaKnown RBP14.26□□□□□ -0.13
Ssbp1-201ENSMUST00000031971 St18Q80TY4 1045 aa14.22□□□□□ -0.13
Ssbp1-201ENSMUST00000031971 Atad2bE9Q166 1460 aaKnown RBP14.21□□□□□ -0.13
Ssbp1-201ENSMUST00000031971 Ube2uB1AUC4 352 aa14.21□□□□□ -0.13
Ssbp1-201ENSMUST00000031971 Kank4Q6P9J5 1016 aa14.21□□□□□ -0.13
Ssbp1-201ENSMUST00000031971 Tulp1Q9Z273 543 aa14.2□□□□□ -0.14
Ssbp1-201ENSMUST00000031971 Thoc2B1AZI6 1594 aaKnown RBP14.17□□□□□ -0.14
Ssbp1-201ENSMUST00000031971 Prim1P20664 417 aa14.17□□□□□ -0.14
Ssbp1-201ENSMUST00000031971 Znf579Q80VM4 562 aa14.17□□□□□ -0.14
Ssbp1-201ENSMUST00000031971 Smarca4Q3TKT4 1613 aaKnown RBP14.15□□□□□ -0.14
Ssbp1-201ENSMUST00000031971 Arhgef1Q61210 920 aaKnown RBP14.15□□□□□ -0.14
Ssbp1-201ENSMUST00000031971 Bclaf1Q8K019 919 aaKnown RBP14.15□□□□□ -0.14
Ssbp1-201ENSMUST00000031971 Pelp1Q9DBD5 1123 aaKnown RBP14.15□□□□□ -0.14
Ssbp1-201ENSMUST00000031971 Fam181bQ80VF6 417 aa14.12□□□□□ -0.15
Ssbp1-201ENSMUST00000031971 Pak3Q61036 559 aa14.08□□□□□ -0.16
Ssbp1-201ENSMUST00000031971 Iqgap2Q3UQ44 1575 aa14.07□□□□□ -0.16
Ssbp1-201ENSMUST00000031971 Rtl1Q7M732 1744 aa14.07□□□□□ -0.16
Ssbp1-201ENSMUST00000031971 Hmx1O70218 332 aa14.02□□□□□ -0.17
Ssbp1-201ENSMUST00000031971 Jph4Q80WT0 628 aa14□□□□□ -0.17
Ssbp1-201ENSMUST00000031971 C1qbpO35658 278 aa13.99□□□□□ -0.17
Ssbp1-201ENSMUST00000031971 Chrm1P12657 460 aa13.99□□□□□ -0.17
Ssbp1-201ENSMUST00000031971 Ercc6F8VPZ5 1481 aa13.95□□□□□ -0.18
Ssbp1-201ENSMUST00000031971 Pcdhb17Q91VD8 799 aa13.95□□□□□ -0.18
Ssbp1-201ENSMUST00000031971 Frmpd1A2AKB4 1549 aa13.95□□□□□ -0.18
Ssbp1-201ENSMUST00000031971 Cc2d2aQ8CFW7 1633 aa13.94□□□□□ -0.18
Ssbp1-201ENSMUST00000031971 Ccdc136Q3TVA9 1136 aa13.94□□□□□ -0.18
Ssbp1-201ENSMUST00000031971 Spock2Q9ER58 423 aa13.94□□□□□ -0.18
Ssbp1-201ENSMUST00000031971 Wdr62Q3U3T8 1523 aa13.94□□□□□ -0.18
Ssbp1-201ENSMUST00000031971 Synj1Q8CHC4 1574 aa13.93□□□□□ -0.18
Ssbp1-201ENSMUST00000031971 Pcdh10E9PXQ7 1057 aa13.93□□□□□ -0.18
Ssbp1-201ENSMUST00000031971 Scarf1Q5ND28 820 aa13.93□□□□□ -0.18
Ssbp1-201ENSMUST00000031971 Axin1O35625 863 aa13.92□□□□□ -0.18
Ssbp1-201ENSMUST00000031971 EdaraddQ8VHX2 208 aa13.92□□□□□ -0.18
Ssbp1-201ENSMUST00000031971 CftrP26361 1476 aa13.92□□□□□ -0.18
Ssbp1-201ENSMUST00000031971 Lce6aD3YV94 81 aa13.88□□□□□ -0.19
Ssbp1-201ENSMUST00000031971 Fam135aQ6NS59 1506 aa13.87□□□□□ -0.19
Ssbp1-201ENSMUST00000031971 Cttnbp2B9EJA2 1648 aa13.83□□□□□ -0.2
Ssbp1-201ENSMUST00000031971 Brd4Q9ESU6 1400 aaKnown RBP13.82□□□□□ -0.2
Ssbp1-201ENSMUST00000031971 Ppp6r1Q7TSI3 856 aa13.8□□□□□ -0.2
Ssbp1-201ENSMUST00000031971 Ferd3lQ923Z4 168 aa13.8□□□□□ -0.2
Ssbp1-201ENSMUST00000031971 Ecm2Q5FW85 670 aa13.78□□□□□ -0.2
Ssbp1-201ENSMUST00000031971 Evi5P97366 809 aa13.77□□□□□ -0.21
Ssbp1-201ENSMUST00000031971 Unc13aQ4KUS2 1712 aa13.77□□□□□ -0.21
Ssbp1-201ENSMUST00000031971 Fndc3aQ8BX90 1198 aa13.76□□□□□ -0.21
Ssbp1-201ENSMUST00000031971 Phldb1Q6PDH0 1371 aaKnown RBP13.75□□□□□ -0.21
Ssbp1-201ENSMUST00000031971 Dkk1O54908 272 aa13.75□□□□□ -0.21
Ssbp1-201ENSMUST00000031971 Msh5Q9QUM7 833 aa13.72□□□□□ -0.21
Ssbp1-201ENSMUST00000031971 E9Q0B3 247 aa13.71□□□□□ -0.21
Ssbp1-201ENSMUST00000031971 Irx5Q9JKQ4 484 aa13.68□□□□□ -0.22
Ssbp1-201ENSMUST00000031971 Scnn1bQ9WU38 638 aa13.68□□□□□ -0.22
Ssbp1-201ENSMUST00000031971 Gm11563B1AQ90 168 aa13.67□□□□□ -0.22
Ssbp1-201ENSMUST00000031971 Krtap4-7Q9D732 168 aa13.67□□□□□ -0.22
Ssbp1-201ENSMUST00000031971 TimelessQ9R1X4 1197 aa13.67□□□□□ -0.22
Ssbp1-201ENSMUST00000031971 Actn4P57780 912 aaKnown RBP13.65□□□□□ -0.22
Ssbp1-201ENSMUST00000031971 Ier5lQ99J55 406 aa13.64□□□□□ -0.23
Ssbp1-201ENSMUST00000031971 Gm11555B1AQ89 175 aa13.63□□□□□ -0.23
Ssbp1-201ENSMUST00000031971 PsdQ5DTT2 1024 aa13.63□□□□□ -0.23
Ssbp1-201ENSMUST00000031971 ElnP54320 860 aa13.62□□□□□ -0.23
Ssbp1-201ENSMUST00000031971 Adnp2Q8CHC8 1165 aaKnown RBP13.62□□□□□ -0.23
Ssbp1-201ENSMUST00000031971 Thap8E9Q695 213 aa13.61□□□□□ -0.23
Ssbp1-201ENSMUST00000031971 Ubl4bQ9CQ84 188 aa13.6□□□□□ -0.23
Ssbp1-201ENSMUST00000031971 Fkbp4P30416 458 aa13.58□□□□□ -0.24
Ssbp1-201ENSMUST00000031971 Sall2Q9QX96 1004 aa13.56□□□□□ -0.24
Ssbp1-201ENSMUST00000031971 Esf1Q3V1V3 845 aaKnown RBP13.54□□□□□ -0.24
Ssbp1-201ENSMUST00000031971 Baz1bQ9Z277 1479 aa13.54□□□□□ -0.24
Ssbp1-201ENSMUST00000031971 Mrc2Q64449 1479 aa13.51□□□□□ -0.25
Ssbp1-201ENSMUST00000031971 Stk3Q9JI10 497 aa13.51□□□□□ -0.25
Ssbp1-201ENSMUST00000031971 Zbtb22Q9Z0G7 638 aa13.51□□□□□ -0.25
Ssbp1-201ENSMUST00000031971 RragcQ99K70 398 aa13.5□□□□□ -0.25
Ssbp1-201ENSMUST00000031971 Pdzrn4E9PUZ9 1014 aa13.47□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 13.5 ms