RNA–Protein interactions for RNA: ENSMUST00000028003.8

Lmx1a-201, Transcript of LIM homeobox transcription factor 1-alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lmx1a, Length 3,347 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lmx1a-201ENSMUST00000028003 Disp1Q3TDN0 1521 aa12.85□□□□□ -0.35
Lmx1a-201ENSMUST00000028003 Pabpn1Q8CCS6 302 aaKnown RBP12.85□□□□□ -0.35
Lmx1a-201ENSMUST00000028003 Cdk11bP24788 784 aaKnown RBP12.84□□□□□ -0.35
Lmx1a-201ENSMUST00000028003 NrkQ9R0G8 1455 aa12.83□□□□□ -0.35
Lmx1a-201ENSMUST00000028003 Il27Q8K3I6 234 aa12.83□□□□□ -0.36
Lmx1a-201ENSMUST00000028003 NefmP08553 848 aa12.79□□□□□ -0.36
Lmx1a-201ENSMUST00000028003 Top2aQ01320 1528 aaKnown RBP12.79□□□□□ -0.36
Lmx1a-201ENSMUST00000028003 Samd9lQ69Z37 1561 aa12.78□□□□□ -0.36
Lmx1a-201ENSMUST00000028003 Nop58Q6DFW4 536 aaKnown RBP12.75□□□□□ -0.37
Lmx1a-201ENSMUST00000028003 AqrQ8CFQ3 1481 aaKnown RBP12.75□□□□□ -0.37
Lmx1a-201ENSMUST00000028003 Wdr66E9Q743 1299 aa12.74□□□□□ -0.37
Lmx1a-201ENSMUST00000028003 Setd1bQ8CFT2 1985 aa12.72□□□□□ -0.37
Lmx1a-201ENSMUST00000028003 Fam71e1A1L3C1 212 aa12.71□□□□□ -0.37
Lmx1a-201ENSMUST00000028003 Grin2aP35436 1464 aa12.71□□□□□ -0.38
Lmx1a-201ENSMUST00000028003 Shroom4Q1W617 1475 aa12.71□□□□□ -0.38
Lmx1a-201ENSMUST00000028003 Magi3Q9EQJ9 1476 aa12.71□□□□□ -0.38
Lmx1a-201ENSMUST00000028003 Fgd6Q69ZL1 1399 aa12.69□□□□□ -0.38
Lmx1a-201ENSMUST00000028003 SynmQ70IV5 1561 aa12.66□□□□□ -0.38
Lmx1a-201ENSMUST00000028003 Ifnlr1Q8CGK5 535 aa12.66□□□□□ -0.38
Lmx1a-201ENSMUST00000028003 Ccdc88bQ4QRL3 1481 aa12.66□□□□□ -0.38
Lmx1a-201ENSMUST00000028003 Rad54l2Q99NG0 1466 aa12.62□□□□□ -0.39
Lmx1a-201ENSMUST00000028003 Pla2r1Q62028 1487 aa12.61□□□□□ -0.39
Lmx1a-201ENSMUST00000028003 CadpsQ80TJ1 1355 aa12.59□□□□□ -0.39
Lmx1a-201ENSMUST00000028003 Adgrl3Q80TS3 1537 aa12.58□□□□□ -0.4
Lmx1a-201ENSMUST00000028003 PtprkP35822 1457 aa12.58□□□□□ -0.4
Lmx1a-201ENSMUST00000028003 Pelp1Q9DBD5 1123 aaKnown RBP12.58□□□□□ -0.4
Lmx1a-201ENSMUST00000028003 Cep170Q6A065 1588 aa12.57□□□□□ -0.4
Lmx1a-201ENSMUST00000028003 Gapvd1Q6PAR5 1458 aa12.56□□□□□ -0.4
Lmx1a-201ENSMUST00000028003 Abcc1O35379 1528 aa12.54□□□□□ -0.4
Lmx1a-201ENSMUST00000028003 Arhgef5E9Q7D5 1581 aa12.54□□□□□ -0.4
Lmx1a-201ENSMUST00000028003 EprsQ8CGC7 1512 aaKnown RBP12.54□□□□□ -0.4
Lmx1a-201ENSMUST00000028003 Mapk8ip2Q9ERE9 830 aa12.54□□□□□ -0.4
Lmx1a-201ENSMUST00000028003 Map3k4O08648 1597 aa12.53□□□□□ -0.4
Lmx1a-201ENSMUST00000028003 Dnmt1P13864 1620 aaKnown RBP12.53□□□□□ -0.4
Lmx1a-201ENSMUST00000028003 Mroh2bQ7M6Y6 1581 aa12.53□□□□□ -0.4
Lmx1a-201ENSMUST00000028003 TchhA0A0B4J1F9 1599 aa12.53□□□□□ -0.4
Lmx1a-201ENSMUST00000028003 Adamts12Q811B3 1600 aa12.53□□□□□ -0.4
Lmx1a-201ENSMUST00000028003 Mier1Q5UAK0 511 aa12.51□□□□□ -0.41
Lmx1a-201ENSMUST00000028003 Ppargc1bQ8VHJ7 1014 aa12.5□□□□□ -0.41
Lmx1a-201ENSMUST00000028003 Map3k1P53349 1493 aa12.5□□□□□ -0.41
Lmx1a-201ENSMUST00000028003 Neo1P97798 1493 aa12.5□□□□□ -0.41
Lmx1a-201ENSMUST00000028003 Ttbk1Q6PCN3 1308 aa12.48□□□□□ -0.41
Lmx1a-201ENSMUST00000028003 Abca16E9PWJ7 1678 aa12.48□□□□□ -0.41
Lmx1a-201ENSMUST00000028003 Chd1P40201 1711 aa12.47□□□□□ -0.41
Lmx1a-201ENSMUST00000028003 PtprtQ99M80 1454 aa12.47□□□□□ -0.41
Lmx1a-201ENSMUST00000028003 Abcc2Q8VI47 1543 aa12.47□□□□□ -0.41
Lmx1a-201ENSMUST00000028003 Chic1Q8CBW7 227 aa12.47□□□□□ -0.41
Lmx1a-201ENSMUST00000028003 Gm156Q58A37 223 aa12.46□□□□□ -0.41
Lmx1a-201ENSMUST00000028003 Polr1aO35134 1717 aaKnown RBP12.46□□□□□ -0.41
Lmx1a-201ENSMUST00000028003 Carmil1Q6EDY6 1374 aa12.46□□□□□ -0.42
Lmx1a-201ENSMUST00000028003 Rpap1Q80TE0 1409 aa12.45□□□□□ -0.42
Lmx1a-201ENSMUST00000028003 ClspnQ80YR7 1315 aa12.45□□□□□ -0.42
Lmx1a-201ENSMUST00000028003 Arhgef12Q8R4H2 1543 aaKnown RBP12.45□□□□□ -0.42
Lmx1a-201ENSMUST00000028003 Ythdc2B2RR83 1445 aaKnown RBP12.44□□□□□ -0.42
Lmx1a-201ENSMUST00000028003 AknaQ80VW7 1404 aa12.44□□□□□ -0.42
Lmx1a-201ENSMUST00000028003 Aebp2Q9Z248 504 aaKnown RBP12.44□□□□□ -0.42
Lmx1a-201ENSMUST00000028003 Rtl5Q5DTT4 599 aa12.43□□□□□ -0.42
Lmx1a-201ENSMUST00000028003 Gm14025A2AP89 1413 aa12.43□□□□□ -0.42
Lmx1a-201ENSMUST00000028003 SafbD3YXK2 937 aaKnown RBP12.42□□□□□ -0.42
Lmx1a-201ENSMUST00000028003 Soga1E1U8D0 1418 aa12.42□□□□□ -0.42
Lmx1a-201ENSMUST00000028003 Rapgef2Q8CHG7 1496 aa12.42□□□□□ -0.42
Lmx1a-201ENSMUST00000028003 WizO88286 1684 aaKnown RBP12.42□□□□□ -0.42
Lmx1a-201ENSMUST00000028003 Setbp1Q9Z180 1582 aa12.42□□□□□ -0.42
Lmx1a-201ENSMUST00000028003 Slx4Q6P1D7 1565 aa12.41□□□□□ -0.42
Lmx1a-201ENSMUST00000028003 Tnnt3Q9QZ47 272 aa12.4□□□□□ -0.42
Lmx1a-201ENSMUST00000028003 AI481877A2ALV5 1481 aa12.4□□□□□ -0.42
Lmx1a-201ENSMUST00000028003 BC005561E9Q5E2 1589 aa12.39□□□□□ -0.43
Lmx1a-201ENSMUST00000028003 PxdnQ3UQ28 1475 aa12.39□□□□□ -0.43
Lmx1a-201ENSMUST00000028003 Pprc1Q6NZN1 1644 aa12.39□□□□□ -0.43
Lmx1a-201ENSMUST00000028003 Abca5Q8K448 1642 aa12.38□□□□□ -0.43
Lmx1a-201ENSMUST00000028003 Eif4g1Q6NZJ6 1600 aaKnown RBP12.37□□□□□ -0.43
Lmx1a-201ENSMUST00000028003 Anp32aO35381 247 aa12.36□□□□□ -0.43
Lmx1a-201ENSMUST00000028003 Rrbp1Q99PL5 1605 aaKnown RBP12.35□□□□□ -0.43
Lmx1a-201ENSMUST00000028003 Gm7298A0A0N4SVU1 1476 aa12.35□□□□□ -0.43
Lmx1a-201ENSMUST00000028003 Arhgap35Q91YM2 1499 aa12.35□□□□□ -0.43
Lmx1a-201ENSMUST00000028003 Hdac5Q9Z2V6 1113 aa12.34□□□□□ -0.43
Lmx1a-201ENSMUST00000028003 Arhgap27A2AB59 869 aa12.34□□□□□ -0.43
Lmx1a-201ENSMUST00000028003 Hnrnpul2Q00PI9 745 aaKnown RBP12.33□□□□□ -0.44
Lmx1a-201ENSMUST00000028003 Igf1rQ60751 1373 aa12.32□□□□□ -0.44
Lmx1a-201ENSMUST00000028003 Npm2Q80W85 207 aa12.32□□□□□ -0.44
Lmx1a-201ENSMUST00000028003 Jph4Q80WT0 628 aa12.3□□□□□ -0.44
Lmx1a-201ENSMUST00000028003 Clasp1Q80TV8 1535 aaKnown RBP12.3□□□□□ -0.44
Lmx1a-201ENSMUST00000028003 Kdm5bQ80Y84 1544 aa12.29□□□□□ -0.44
Lmx1a-201ENSMUST00000028003 Fyco1Q8VDC1 1437 aa12.28□□□□□ -0.44
Lmx1a-201ENSMUST00000028003 Clip1Q922J3 1391 aa12.27□□□□□ -0.44
Lmx1a-201ENSMUST00000028003 Plppr3Q7TPB0 716 aa12.27□□□□□ -0.45
Lmx1a-201ENSMUST00000028003 ArxO35085 564 aa12.26□□□□□ -0.45
Lmx1a-201ENSMUST00000028003 Ak9G3UYQ4 1894 aa12.26□□□□□ -0.45
Lmx1a-201ENSMUST00000028003 Pknox2Q8BG99 474 aa12.26□□□□□ -0.45
Lmx1a-201ENSMUST00000028003 Cep162Q6ZQ06 1403 aa12.24□□□□□ -0.45
Lmx1a-201ENSMUST00000028003 Kiaa1210E9Q0C6 1637 aa12.23□□□□□ -0.45
Lmx1a-201ENSMUST00000028003 AdgbG3UZ78 1657 aa12.22□□□□□ -0.45
Lmx1a-201ENSMUST00000028003 Ttc37F8VPK0 1563 aa12.22□□□□□ -0.45
Lmx1a-201ENSMUST00000028003 Pcdh10E9PXQ7 1057 aa12.21□□□□□ -0.45
Lmx1a-201ENSMUST00000028003 Wdr7Q920I9 1489 aa12.2□□□□□ -0.46
Lmx1a-201ENSMUST00000028003 WrnO09053 1401 aa12.2□□□□□ -0.46
Lmx1a-201ENSMUST00000028003 Cux1P53564 1515 aa12.2□□□□□ -0.46
Lmx1a-201ENSMUST00000028003 Arhgef11Q68FM7 1552 aa12.19□□□□□ -0.46
Lmx1a-201ENSMUST00000028003 Fgd1P52734 960 aa12.19□□□□□ -0.46
Lmx1a-201ENSMUST00000028003 NhsB1AV60 1647 aa12.19□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 17.6 ms