RNA–Protein interactions for RNA: ENSMUST00000003645.8

Ercc1-201, Transcript of DNA excision repair protein ERCC-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-201ENSMUST00000003645 Clip1Q922J3 1391 aa23.6■■□□□ 1.37
Ercc1-201ENSMUST00000003645 Myt1lP97500 1187 aa23.57■■□□□ 1.36
Ercc1-201ENSMUST00000003645 EprsQ8CGC7 1512 aaKnown RBP23.54■■□□□ 1.36
Ercc1-201ENSMUST00000003645 Adamts12Q811B3 1600 aa23.46■■□□□ 1.35
Ercc1-201ENSMUST00000003645 Rpap1Q80TE0 1409 aa23.46■■□□□ 1.35
Ercc1-201ENSMUST00000003645 Polr1aO35134 1717 aaKnown RBP23.45■■□□□ 1.34
Ercc1-201ENSMUST00000003645 CadpsQ80TJ1 1355 aa23.41■■□□□ 1.34
Ercc1-201ENSMUST00000003645 Cux1P53564 1515 aa23.41■■□□□ 1.34
Ercc1-201ENSMUST00000003645 WizO88286 1684 aaKnown RBP23.41■■□□□ 1.34
Ercc1-201ENSMUST00000003645 TchhA0A0B4J1F9 1599 aa23.4■■□□□ 1.34
Ercc1-201ENSMUST00000003645 PxdnQ3UQ28 1475 aa23.39■■□□□ 1.33
Ercc1-201ENSMUST00000003645 Fgd6Q69ZL1 1399 aa23.38■■□□□ 1.33
Ercc1-201ENSMUST00000003645 Abca16E9PWJ7 1678 aa23.37■■□□□ 1.33
Ercc1-201ENSMUST00000003645 Gm7298A0A0N4SVU1 1476 aa23.36■■□□□ 1.33
Ercc1-201ENSMUST00000003645 Fyco1Q8VDC1 1437 aa23.36■■□□□ 1.33
Ercc1-201ENSMUST00000003645 Abcc2Q8VI47 1543 aa23.35■■□□□ 1.33
Ercc1-201ENSMUST00000003645 Shroom2A2ALU4 1481 aa23.35■■□□□ 1.33
Ercc1-201ENSMUST00000003645 Ankrd26Q811D2 1581 aa23.34■■□□□ 1.33
Ercc1-201ENSMUST00000003645 Soga1E1U8D0 1418 aa23.32■■□□□ 1.32
Ercc1-201ENSMUST00000003645 Eea1Q8BL66 1411 aa23.3■■□□□ 1.32
Ercc1-201ENSMUST00000003645 Arhgap27A2AB59 869 aa23.29■■□□□ 1.32
Ercc1-201ENSMUST00000003645 Setd5Q5XJV7 1441 aa23.28■■□□□ 1.32
Ercc1-201ENSMUST00000003645 Abca5Q8K448 1642 aa23.27■■□□□ 1.32
Ercc1-201ENSMUST00000003645 Map3k4O08648 1597 aa23.26■■□□□ 1.31
Ercc1-201ENSMUST00000003645 Dnmt1P13864 1620 aaKnown RBP23.24■■□□□ 1.31
Ercc1-201ENSMUST00000003645 Erich3F6QRE9 1637 aa23.23■■□□□ 1.31
Ercc1-201ENSMUST00000003645 Pabpn1Q8CCS6 302 aaKnown RBP23.22■■□□□ 1.31
Ercc1-201ENSMUST00000003645 Slx4Q6P1D7 1565 aa23.17■■□□□ 1.3
Ercc1-201ENSMUST00000003645 Arap1Q4LDD4 1452 aa23.16■■□□□ 1.3
Ercc1-201ENSMUST00000003645 AknaQ80VW7 1404 aa23.16■■□□□ 1.3
Ercc1-201ENSMUST00000003645 Aebp1Q640N1 1128 aa23.14■■□□□ 1.3
Ercc1-201ENSMUST00000003645 Lmo7E9PYF4 1699 aaKnown RBP23.14■■□□□ 1.29
Ercc1-201ENSMUST00000003645 BC005561E9Q5E2 1589 aa23.13■■□□□ 1.29
Ercc1-201ENSMUST00000003645 Neo1P97798 1493 aa23.12■■□□□ 1.29
Ercc1-201ENSMUST00000003645 WrnO09053 1401 aa23.12■■□□□ 1.29
Ercc1-201ENSMUST00000003645 Abcc1O35379 1528 aa23.1■■□□□ 1.29
Ercc1-201ENSMUST00000003645 BlmO88700 1416 aa23.1■■□□□ 1.29
Ercc1-201ENSMUST00000003645 Pelp1Q9DBD5 1123 aaKnown RBP23.09■■□□□ 1.29
Ercc1-201ENSMUST00000003645 Arhgef5E9Q7D5 1581 aa23.08■■□□□ 1.29
Ercc1-201ENSMUST00000003645 Pcf11G3X9Z4 1553 aa23.08■■□□□ 1.29
Ercc1-201ENSMUST00000003645 Ap3b1Q9Z1T1 1105 aa23.05■■□□□ 1.28
Ercc1-201ENSMUST00000003645 Jph4Q80WT0 628 aa23.04■■□□□ 1.28
Ercc1-201ENSMUST00000003645 CntlnA2AM05 1397 aa23.04■■□□□ 1.28
Ercc1-201ENSMUST00000003645 Gm14025A2AP89 1413 aa23.03■■□□□ 1.28
Ercc1-201ENSMUST00000003645 Arhgef12Q8R4H2 1543 aaKnown RBP23■■□□□ 1.27
Ercc1-201ENSMUST00000003645 Chd1P40201 1711 aa22.97■■□□□ 1.27
Ercc1-201ENSMUST00000003645 Kif27Q7M6Z4 1394 aa22.96■■□□□ 1.27
Ercc1-201ENSMUST00000003645 Zcchc11B2RX14 1644 aaKnown RBP22.95■■□□□ 1.27
Ercc1-201ENSMUST00000003645 Naip1Q9QWK5 1403 aa22.95■■□□□ 1.26
Ercc1-201ENSMUST00000003645 Gapvd1Q6PAR5 1458 aa22.95■■□□□ 1.26
Ercc1-201ENSMUST00000003645 Ythdc2B2RR83 1445 aaKnown RBP22.94■■□□□ 1.26
Ercc1-201ENSMUST00000003645 Tiam1Q60610 1591 aa22.92■■□□□ 1.26
Ercc1-201ENSMUST00000003645 Col17a1Q07563 1470 aa22.91■■□□□ 1.26
Ercc1-201ENSMUST00000003645 Arhgap31A6X8Z5 1425 aa22.91■■□□□ 1.26
Ercc1-201ENSMUST00000003645 Rrbp1Q99PL5 1605 aaKnown RBP22.9■■□□□ 1.26
Ercc1-201ENSMUST00000003645 Peg3Q3URU2 1571 aa22.89■■□□□ 1.26
Ercc1-201ENSMUST00000003645 Rapgef6Q5NCJ1 1609 aa22.87■■□□□ 1.25
Ercc1-201ENSMUST00000003645 Gm1043A0A140LJC2 1431 aa22.87■■□□□ 1.25
Ercc1-201ENSMUST00000003645 Cep170Q6A065 1588 aa22.86■■□□□ 1.25
Ercc1-201ENSMUST00000003645 PtprtQ99M80 1454 aa22.85■■□□□ 1.25
Ercc1-201ENSMUST00000003645 Plekhg3Q4VAC9 1341 aa22.84■■□□□ 1.25
Ercc1-201ENSMUST00000003645 Ccdc141E9Q8Q6 1531 aa22.82■■□□□ 1.24
Ercc1-201ENSMUST00000003645 Ncoa2Q61026 1462 aa22.81■■□□□ 1.24
Ercc1-201ENSMUST00000003645 Kdm5bQ80Y84 1544 aa22.81■■□□□ 1.24
Ercc1-201ENSMUST00000003645 Gm156Q58A37 223 aa22.78■■□□□ 1.24
Ercc1-201ENSMUST00000003645 Fkbp15Q6P9Q6 1216 aaKnown RBP22.77■■□□□ 1.24
Ercc1-201ENSMUST00000003645 Ncoa3O09000 1398 aa22.77■■□□□ 1.24
Ercc1-201ENSMUST00000003645 Arhgef11Q68FM7 1552 aa22.76■■□□□ 1.23
Ercc1-201ENSMUST00000003645 Lmod2Q3UHZ5 550 aa22.76■■□□□ 1.23
Ercc1-201ENSMUST00000003645 Adgrl3Q80TS3 1537 aa22.75■■□□□ 1.23
Ercc1-201ENSMUST00000003645 Mroh2aD3Z750 1679 aa22.74■■□□□ 1.23
Ercc1-201ENSMUST00000003645 Igf1rQ60751 1373 aa22.73■■□□□ 1.23
Ercc1-201ENSMUST00000003645 Mug1P28665 1476 aa22.73■■□□□ 1.23
Ercc1-201ENSMUST00000003645 Ehmt2Q9Z148 1263 aaKnown RBP22.73■■□□□ 1.23
Ercc1-201ENSMUST00000003645 AI481877A2ALV5 1481 aa22.72■■□□□ 1.23
Ercc1-201ENSMUST00000003645 Magi1Q6RHR9 1471 aa22.72■■□□□ 1.23
Ercc1-201ENSMUST00000003645 Fam163aQ8CAA5 168 aa22.72■■□□□ 1.23
Ercc1-201ENSMUST00000003645 Dnajc5P60904 198 aa22.68■■□□□ 1.22
Ercc1-201ENSMUST00000003645 Fancd2Q80V62 1450 aa22.68■■□□□ 1.22
Ercc1-201ENSMUST00000003645 Dhx57Q6P5D3 1388 aaKnown RBP22.67■■□□□ 1.22
Ercc1-201ENSMUST00000003645 Kiaa1551Q5DTW7 1521 aa22.67■■□□□ 1.22
Ercc1-201ENSMUST00000003645 NhsB1AV60 1647 aa22.66■■□□□ 1.22
Ercc1-201ENSMUST00000003645 Lmtk2Q3TYD6 1471 aa22.64■■□□□ 1.22
Ercc1-201ENSMUST00000003645 Gcc2Q8CHG3 1679 aa22.63■■□□□ 1.21
Ercc1-201ENSMUST00000003645 Mapkbp1Q6NS57 1503 aa22.62■■□□□ 1.21
Ercc1-201ENSMUST00000003645 Cul7Q8VE73 1689 aa22.62■■□□□ 1.21
Ercc1-201ENSMUST00000003645 Kiaa1210E9Q0C6 1637 aa22.62■■□□□ 1.21
Ercc1-201ENSMUST00000003645 NexmifQ5DTT1 1515 aa22.61■■□□□ 1.21
Ercc1-201ENSMUST00000003645 Wdr7Q920I9 1489 aa22.59■■□□□ 1.21
Ercc1-201ENSMUST00000003645 Setbp1Q9Z180 1582 aa22.59■■□□□ 1.21
Ercc1-201ENSMUST00000003645 Cdc42bpaQ3UU96 1719 aa22.58■■□□□ 1.21
Ercc1-201ENSMUST00000003645 Prex2Q3LAC4 1598 aa22.58■■□□□ 1.21
Ercc1-201ENSMUST00000003645 Lrrc9Q8CDN9 1456 aa22.57■■□□□ 1.2
Ercc1-201ENSMUST00000003645 Ccnb3Q810T2 1396 aa22.55■■□□□ 1.2
Ercc1-201ENSMUST00000003645 Atp10dQ8K2X1 1416 aa22.55■■□□□ 1.2
Ercc1-201ENSMUST00000003645 UbtfP25976 765 aaKnown RBP22.53■■□□□ 1.2
Ercc1-201ENSMUST00000003645 Znf608Q56A10 1511 aa22.53■■□□□ 1.2
Ercc1-201ENSMUST00000003645 Ifnlr1Q8CGK5 535 aa22.51■■□□□ 1.19
Ercc1-201ENSMUST00000003645 Pprc1Q6NZN1 1644 aa22.5■■□□□ 1.19
Ercc1-201ENSMUST00000003645 Fam208aQ69ZR9 1610 aaKnown RBP22.5■■□□□ 1.19
Retrieved 100 of 22,080 RNA–protein pairs in 14.2 ms