RNA–Protein interactions for RNA: ENSMUST00000001818.4

Crnkl1-201, Transcript of Crooked neck-like protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Crnkl1, Length 3,428 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1-201ENSMUST00000001818 Samd9lQ69Z37 1561 aa11.38□□□□□ -0.59
Crnkl1-201ENSMUST00000001818 Disp1Q3TDN0 1521 aa11.37□□□□□ -0.59
Crnkl1-201ENSMUST00000001818 Rpap1Q80TE0 1409 aa11.36□□□□□ -0.59
Crnkl1-201ENSMUST00000001818 Eea1Q8BL66 1411 aa11.35□□□□□ -0.59
Crnkl1-201ENSMUST00000001818 AknaQ80VW7 1404 aa11.34□□□□□ -0.59
Crnkl1-201ENSMUST00000001818 Grin2aP35436 1464 aa11.33□□□□□ -0.6
Crnkl1-201ENSMUST00000001818 Aebp1Q640N1 1128 aa11.31□□□□□ -0.6
Crnkl1-201ENSMUST00000001818 SynmQ70IV5 1561 aa11.31□□□□□ -0.6
Crnkl1-201ENSMUST00000001818 Supt5hO55201 1082 aaKnown RBP11.3□□□□□ -0.6
Crnkl1-201ENSMUST00000001818 Cc2d2bA0A286YDU8 1405 aa11.3□□□□□ -0.6
Crnkl1-201ENSMUST00000001818 BlmO88700 1416 aa11.29□□□□□ -0.6
Crnkl1-201ENSMUST00000001818 Pcgf6Q99NA9 353 aa11.28□□□□□ -0.6
Crnkl1-201ENSMUST00000001818 EprsQ8CGC7 1512 aaKnown RBP11.28□□□□□ -0.6
Crnkl1-201ENSMUST00000001818 Map3k1P53349 1493 aa11.27□□□□□ -0.6
Crnkl1-201ENSMUST00000001818 Wdr66E9Q743 1299 aa11.26□□□□□ -0.61
Crnkl1-201ENSMUST00000001818 Pabpn1Q8CCS6 302 aaKnown RBP11.26□□□□□ -0.61
Crnkl1-201ENSMUST00000001818 Pla2r1Q62028 1487 aa11.26□□□□□ -0.61
Crnkl1-201ENSMUST00000001818 Magi3Q9EQJ9 1476 aa11.26□□□□□ -0.61
Crnkl1-201ENSMUST00000001818 CadpsQ80TJ1 1355 aa11.25□□□□□ -0.61
Crnkl1-201ENSMUST00000001818 WrnO09053 1401 aa11.24□□□□□ -0.61
Crnkl1-201ENSMUST00000001818 Nup160Q9Z0W3 1402 aaKnown RBP11.23□□□□□ -0.61
Crnkl1-201ENSMUST00000001818 Fyco1Q8VDC1 1437 aa11.23□□□□□ -0.61
Crnkl1-201ENSMUST00000001818 Fam50aQ9WV03 339 aaKnown RBP11.22□□□□□ -0.61
Crnkl1-201ENSMUST00000001818 Fgd6Q69ZL1 1399 aa11.22□□□□□ -0.61
Crnkl1-201ENSMUST00000001818 Gm7298A0A0N4SVU1 1476 aa11.22□□□□□ -0.61
Crnkl1-201ENSMUST00000001818 Cux1P53564 1515 aa11.21□□□□□ -0.61
Crnkl1-201ENSMUST00000001818 Kif27Q7M6Z4 1394 aa11.21□□□□□ -0.61
Crnkl1-201ENSMUST00000001818 Ube2uB1AUC4 352 aa11.21□□□□□ -0.62
Crnkl1-201ENSMUST00000001818 Eid3Q3V124 375 aa11.2□□□□□ -0.62
Crnkl1-201ENSMUST00000001818 Jph4Q80WT0 628 aa11.19□□□□□ -0.62
Crnkl1-201ENSMUST00000001818 PxdnQ3UQ28 1475 aa11.18□□□□□ -0.62
Crnkl1-201ENSMUST00000001818 AqrQ8CFQ3 1481 aaKnown RBP11.18□□□□□ -0.62
Crnkl1-201ENSMUST00000001818 Rusc2Q80U22 1514 aa11.17□□□□□ -0.62
Crnkl1-201ENSMUST00000001818 Soga1E1U8D0 1418 aa11.16□□□□□ -0.62
Crnkl1-201ENSMUST00000001818 Arap1Q4LDD4 1452 aa11.16□□□□□ -0.62
Crnkl1-201ENSMUST00000001818 Polr1aO35134 1717 aaKnown RBP11.16□□□□□ -0.62
Crnkl1-201ENSMUST00000001818 Eif4g3Q80XI3 1579 aaKnown RBP11.16□□□□□ -0.62
Crnkl1-201ENSMUST00000001818 WizO88286 1684 aaKnown RBP11.15□□□□□ -0.62
Crnkl1-201ENSMUST00000001818 Eif4g1Q6NZJ6 1600 aaKnown RBP11.15□□□□□ -0.63
Crnkl1-201ENSMUST00000001818 CntlnA2AM05 1397 aa11.14□□□□□ -0.63
Crnkl1-201ENSMUST00000001818 Arid3cA6PWV5 409 aa11.14□□□□□ -0.63
Crnkl1-201ENSMUST00000001818 NefmP08553 848 aa11.14□□□□□ -0.63
Crnkl1-201ENSMUST00000001818 Neo1P97798 1493 aa11.14□□□□□ -0.63
Crnkl1-201ENSMUST00000001818 Ttbk1Q6PCN3 1308 aa11.14□□□□□ -0.63
Crnkl1-201ENSMUST00000001818 TchhA0A0B4J1F9 1599 aa11.14□□□□□ -0.63
Crnkl1-201ENSMUST00000001818 Las1lA2BE28 776 aaKnown RBP11.11□□□□□ -0.63
Crnkl1-201ENSMUST00000001818 Ankrd26Q811D2 1581 aa11.11□□□□□ -0.63
Crnkl1-201ENSMUST00000001818 Chic2Q9D9G3 165 aa11.1□□□□□ -0.63
Crnkl1-201ENSMUST00000001818 Arhgap31A6X8Z5 1425 aa11.08□□□□□ -0.63
Crnkl1-201ENSMUST00000001818 Gm14025A2AP89 1413 aa11.08□□□□□ -0.64
Crnkl1-201ENSMUST00000001818 Naip1Q9QWK5 1403 aa11.08□□□□□ -0.64
Crnkl1-201ENSMUST00000001818 Gpatch8A2A6A1 1505 aa11.08□□□□□ -0.64
Crnkl1-201ENSMUST00000001818 Setd1bQ8CFT2 1985 aa11.08□□□□□ -0.64
Crnkl1-201ENSMUST00000001818 Pbrm1Q8BSQ9 1634 aaKnown RBP11.07□□□□□ -0.64
Crnkl1-201ENSMUST00000001818 Arhgef5E9Q7D5 1581 aa11.06□□□□□ -0.64
Crnkl1-201ENSMUST00000001818 Sall2Q9QX96 1004 aa11.05□□□□□ -0.64
Crnkl1-201ENSMUST00000001818 Shroom2A2ALU4 1481 aa11.05□□□□□ -0.64
Crnkl1-201ENSMUST00000001818 Zbtb7cQ8VCZ7 619 aa11.05□□□□□ -0.64
Crnkl1-201ENSMUST00000001818 Adamts12Q811B3 1600 aa11.05□□□□□ -0.64
Crnkl1-201ENSMUST00000001818 Pcf11G3X9Z4 1553 aa11.04□□□□□ -0.64
Crnkl1-201ENSMUST00000001818 Aebp2Q9Z248 504 aaKnown RBP11.04□□□□□ -0.64
Crnkl1-201ENSMUST00000001818 Ythdc2B2RR83 1445 aaKnown RBP11.02□□□□□ -0.64
Crnkl1-201ENSMUST00000001818 Mapk8ip2Q9ERE9 830 aa11.02□□□□□ -0.64
Crnkl1-201ENSMUST00000001818 Ccnb3Q810T2 1396 aa11.01□□□□□ -0.65
Crnkl1-201ENSMUST00000001818 Ppp1r18Q8BQ30 594 aa11.01□□□□□ -0.65
Crnkl1-201ENSMUST00000001818 Abcc1O35379 1528 aa11.01□□□□□ -0.65
Crnkl1-201ENSMUST00000001818 Abca16E9PWJ7 1678 aa11□□□□□ -0.65
Crnkl1-201ENSMUST00000001818 Gm156Q58A37 223 aa11□□□□□ -0.65
Crnkl1-201ENSMUST00000001818 Abcc2Q8VI47 1543 aa11□□□□□ -0.65
Crnkl1-201ENSMUST00000001818 Plppr3Q7TPB0 716 aa10.99□□□□□ -0.65
Crnkl1-201ENSMUST00000001818 Tiam1Q60610 1591 aa10.98□□□□□ -0.65
Crnkl1-201ENSMUST00000001818 TonslQ6NZL6 1363 aa10.97□□□□□ -0.65
Crnkl1-201ENSMUST00000001818 NclP09405 707 aaKnown RBP10.96□□□□□ -0.65
Crnkl1-201ENSMUST00000001818 Gapvd1Q6PAR5 1458 aa10.96□□□□□ -0.65
Crnkl1-201ENSMUST00000001818 Slx4Q6P1D7 1565 aa10.96□□□□□ -0.66
Crnkl1-201ENSMUST00000001818 Abca5Q8K448 1642 aa10.96□□□□□ -0.66
Crnkl1-201ENSMUST00000001818 Ccdc141E9Q8Q6 1531 aa10.96□□□□□ -0.66
Crnkl1-201ENSMUST00000001818 Ncoa2Q61026 1462 aa10.95□□□□□ -0.66
Crnkl1-201ENSMUST00000001818 Ncoa3O09000 1398 aa10.95□□□□□ -0.66
Crnkl1-201ENSMUST00000001818 Cabp1Q9JLK7 227 aa10.94□□□□□ -0.66
Crnkl1-201ENSMUST00000001818 Dhx57Q6P5D3 1388 aaKnown RBP10.94□□□□□ -0.66
Crnkl1-201ENSMUST00000001818 Fam163aQ8CAA5 168 aa10.94□□□□□ -0.66
Crnkl1-201ENSMUST00000001818 Gm1043A0A140LJC2 1431 aa10.93□□□□□ -0.66
Crnkl1-201ENSMUST00000001818 Mug1P28665 1476 aa10.93□□□□□ -0.66
Crnkl1-201ENSMUST00000001818 Cdk11bP24788 784 aaKnown RBP10.93□□□□□ -0.66
Crnkl1-201ENSMUST00000001818 Tdrd9Q14BI7 1383 aa10.93□□□□□ -0.66
Crnkl1-201ENSMUST00000001818 Erich3F6QRE9 1637 aa10.93□□□□□ -0.66
Crnkl1-201ENSMUST00000001818 Arhgef12Q8R4H2 1543 aaKnown RBP10.92□□□□□ -0.66
Crnkl1-201ENSMUST00000001818 Hnrnpul2Q00PI9 745 aaKnown RBP10.92□□□□□ -0.66
Crnkl1-201ENSMUST00000001818 Neurod1Q60867 357 aa10.92□□□□□ -0.66
Crnkl1-201ENSMUST00000001818 Lmo7E9PYF4 1699 aaKnown RBP10.91□□□□□ -0.66
Crnkl1-201ENSMUST00000001818 Dnmt1P13864 1620 aaKnown RBP10.91□□□□□ -0.66
Crnkl1-201ENSMUST00000001818 Magi1Q6RHR9 1471 aa10.91□□□□□ -0.66
Crnkl1-201ENSMUST00000001818 Map3k4O08648 1597 aa10.91□□□□□ -0.66
Crnkl1-201ENSMUST00000001818 BC005561E9Q5E2 1589 aa10.9□□□□□ -0.67
Crnkl1-201ENSMUST00000001818 Rrp7aQ9D1C9 280 aaKnown RBP10.89□□□□□ -0.67
Crnkl1-201ENSMUST00000001818 Mtus2Q3UHD3 1353 aa10.89□□□□□ -0.67
Crnkl1-201ENSMUST00000001818 Igf1rQ60751 1373 aa10.89□□□□□ -0.67
Crnkl1-201ENSMUST00000001818 NexmifQ5DTT1 1515 aa10.88□□□□□ -0.67
Crnkl1-201ENSMUST00000001818 Rapgef6Q5NCJ1 1609 aa10.88□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 10.2 ms