RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 CYSLTR1Q9Y271 337 aa12.38□□□□□ -0.43
PHGDH-232ENST00000641947 RPL36AP83881 106 aaKnown RBP12.37□□□□□ -0.43
PHGDH-232ENST00000641947 ZNF664Q8N3J9 261 aa12.37□□□□□ -0.43
PHGDH-232ENST00000641947 C20orf203Q8NBC4 194 aa12.37□□□□□ -0.43
PHGDH-232ENST00000641947 RPL36ALQ969Q0 106 aaKnown RBP12.37□□□□□ -0.43
PHGDH-232ENST00000641947 SCGB3A1Q96QR1 104 aa12.37□□□□□ -0.43
PHGDH-232ENST00000641947 CHCHD7Q9BUK0 85 aa12.37□□□□□ -0.43
PHGDH-232ENST00000641947 COL7A1Q02388 2944 aa12.37□□□□□ -0.43
PHGDH-232ENST00000641947 IGIPA6NJ69 53 aa12.36□□□□□ -0.43
PHGDH-232ENST00000641947 ATP5LO75964 103 aa12.36□□□□□ -0.43
PHGDH-232ENST00000641947 LINC00694P0DN24 101 aa12.36□□□□□ -0.43
PHGDH-232ENST00000641947 CTAG1AP78358 180 aa12.36□□□□□ -0.43
PHGDH-232ENST00000641947 DAD1P61803 113 aa12.35□□□□□ -0.43
PHGDH-232ENST00000641947 HHLA3Q9XRX5 114 aa12.35□□□□□ -0.43
PHGDH-232ENST00000641947 SPART-AS1P0CW21 52 aa12.35□□□□□ -0.43
PHGDH-232ENST00000641947 ODF1Q14990 250 aa12.35□□□□□ -0.43
PHGDH-232ENST00000641947 LGALS9CQ6DKI2 356 aa12.35□□□□□ -0.43
PHGDH-232ENST00000641947 ERASQ7Z444 233 aa12.35□□□□□ -0.43
PHGDH-232ENST00000641947 PRO1933Q9H354 126 aa12.35□□□□□ -0.43
PHGDH-232ENST00000641947 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.34□□□□□ -0.43
PHGDH-232ENST00000641947 CRYBA4P53673 196 aa12.34□□□□□ -0.43
PHGDH-232ENST00000641947 S100A12P80511 92 aa12.34□□□□□ -0.43
PHGDH-232ENST00000641947 NTM-AS1Q6ZSK4 140 aa12.34□□□□□ -0.43
PHGDH-232ENST00000641947 ZMAT4Q9H898 229 aa12.34□□□□□ -0.43
PHGDH-232ENST00000641947 PAM16Q9Y3D7 125 aa12.34□□□□□ -0.43
PHGDH-232ENST00000641947 C20orf202A1L168 122 aa12.33□□□□□ -0.44
PHGDH-232ENST00000641947 PCP4L1A6NKN8 68 aa12.33□□□□□ -0.44
PHGDH-232ENST00000641947 PRSS1P07477 247 aa12.33□□□□□ -0.44
PHGDH-232ENST00000641947 BAALCQ8WXS3 180 aa12.33□□□□□ -0.44
PHGDH-232ENST00000641947 COTL1Q14019 142 aa12.33□□□□□ -0.44
PHGDH-232ENST00000641947 ZC2HC1BQ5TFG8 222 aa12.33□□□□□ -0.44
PHGDH-232ENST00000641947 FAM104AQ969W3 186 aa12.33□□□□□ -0.44
PHGDH-232ENST00000641947 OPRPNQ99935 248 aaPredicted RBP12.33□□□□□ -0.44
PHGDH-232ENST00000641947 VAMP8Q9BV40 100 aa12.33□□□□□ -0.44
PHGDH-232ENST00000641947 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.32□□□□□ -0.44
PHGDH-232ENST00000641947 IGKV2-29A2NJV5 120 aaPredicted RBP12.32□□□□□ -0.44
PHGDH-232ENST00000641947 C12orf74Q32Q52 190 aa12.32□□□□□ -0.44
PHGDH-232ENST00000641947 DEFB121Q5J5C9 76 aa12.32□□□□□ -0.44
PHGDH-232ENST00000641947 DAZ4Q86SG3 579 aaKnown RBP12.32□□□□□ -0.44
PHGDH-232ENST00000641947 MRAPQ8TCY5 172 aa12.32□□□□□ -0.44
PHGDH-232ENST00000641947 PRADC1Q9BSG0 188 aa12.32□□□□□ -0.44
PHGDH-232ENST00000641947 C11orf68Q9H3H3 251 aaKnown RBP12.32□□□□□ -0.44
PHGDH-232ENST00000641947 DAZ3Q9NR90 486 aaKnown RBP12.32□□□□□ -0.44
PHGDH-232ENST00000641947 hDV102S1A0JD36 115 aa12.31□□□□□ -0.44
PHGDH-232ENST00000641947 Q6ZN92 141 aa12.31□□□□□ -0.44
PHGDH-232ENST00000641947 VSIG2Q96IQ7 327 aa12.31□□□□□ -0.44
PHGDH-232ENST00000641947 TIMM17AQ99595 171 aa12.31□□□□□ -0.44
PHGDH-232ENST00000641947 TM2D3Q9BRN9 247 aa12.31□□□□□ -0.44
PHGDH-232ENST00000641947 PRO0255Q9UI72 69 aa12.31□□□□□ -0.44
PHGDH-232ENST00000641947 ATP5G1P05496 136 aa12.3□□□□□ -0.44
PHGDH-232ENST00000641947 GYPEP15421 78 aa12.3□□□□□ -0.44
PHGDH-232ENST00000641947 G0S2P27469 103 aa12.3□□□□□ -0.44
PHGDH-232ENST00000641947 CEMP1Q6PRD7 247 aaPredicted RBP12.3□□□□□ -0.44
PHGDH-232ENST00000641947 A0A0J9YWU9 116 aa12.3□□□□□ -0.44
PHGDH-232ENST00000641947 MRPL35Q9NZE8 188 aaKnown RBP12.3□□□□□ -0.44
PHGDH-232ENST00000641947 TRAV9-2A0A087WT02 112 aa12.29□□□□□ -0.44
PHGDH-232ENST00000641947 A0A087WX48 190 aa12.29□□□□□ -0.44
PHGDH-232ENST00000641947 TRAV12-1A0A0B4J245 112 aa12.29□□□□□ -0.44
PHGDH-232ENST00000641947 SPATA45Q537H7 98 aa12.29□□□□□ -0.44
PHGDH-232ENST00000641947 A0A0J9YY99 117 aa12.28□□□□□ -0.44
PHGDH-232ENST00000641947 TMEM141Q96I45 108 aa12.28□□□□□ -0.44
PHGDH-232ENST00000641947 PRKDCP78527 4128 aaKnown RBP12.28□□□□□ -0.44
PHGDH-232ENST00000641947 IGLV4-3A0A075B6K6 122 aa12.28□□□□□ -0.44
PHGDH-232ENST00000641947 PRSS29PA6NIE9 313 aa12.28□□□□□ -0.44
PHGDH-232ENST00000641947 LINC01549A6NIU2 74 aa12.28□□□□□ -0.44
PHGDH-232ENST00000641947 HTN3P15516 51 aa12.28□□□□□ -0.44
PHGDH-232ENST00000641947 PKIAP61925 76 aa12.28□□□□□ -0.44
PHGDH-232ENST00000641947 UBE2D4Q9Y2X8 147 aa12.28□□□□□ -0.44
PHGDH-232ENST00000641947 F5H768 121 aa12.27□□□□□ -0.45
PHGDH-232ENST00000641947 PAX4O43316 350 aa12.27□□□□□ -0.45
PHGDH-232ENST00000641947 SPATA25Q9BR10 227 aa12.27□□□□□ -0.45
PHGDH-232ENST00000641947 TRAV26-1A0A087WT03 109 aa12.26□□□□□ -0.45
PHGDH-232ENST00000641947 TEX48A0A1B0GUV7 120 aa12.26□□□□□ -0.45
PHGDH-232ENST00000641947 GTSF1LQ9H1H1 148 aa12.26□□□□□ -0.45
PHGDH-232ENST00000641947 PYGO1Q9Y3Y4 419 aa12.26□□□□□ -0.45
PHGDH-232ENST00000641947 A0A096LPF7 62 aa12.25□□□□□ -0.45
PHGDH-232ENST00000641947 Q6ZTC4 211 aa12.25□□□□□ -0.45
PHGDH-232ENST00000641947 CST9LQ9H4G1 147 aa12.25□□□□□ -0.45
PHGDH-232ENST00000641947 CHTOPQ9Y3Y2 248 aaKnown RBP12.25□□□□□ -0.45
PHGDH-232ENST00000641947 F8VRH5 84 aa12.24□□□□□ -0.45
PHGDH-232ENST00000641947 IGKCP01834 107 aa12.24□□□□□ -0.45
PHGDH-232ENST00000641947 PMVKQ15126 192 aa12.24□□□□□ -0.45
PHGDH-232ENST00000641947 RNASE13Q5GAN3 156 aaKnown RBP12.24□□□□□ -0.45
PHGDH-232ENST00000641947 STPG4Q8N801 248 aa12.24□□□□□ -0.45
PHGDH-232ENST00000641947 IGLV4-69A0A075B6H9 119 aa12.23□□□□□ -0.45
PHGDH-232ENST00000641947 TSTD3H0UI37 97 aa12.23□□□□□ -0.45
PHGDH-232ENST00000641947 DPM2O94777 84 aa12.23□□□□□ -0.45
PHGDH-232ENST00000641947 ANKRD39Q53RE8 183 aa12.23□□□□□ -0.45
PHGDH-232ENST00000641947 Q6ZUT4 128 aa12.23□□□□□ -0.45
PHGDH-232ENST00000641947 ATP6V0E2Q8NHE4 81 aa12.23□□□□□ -0.45
PHGDH-232ENST00000641947 TP73-AS1Q9UF72 201 aa12.23□□□□□ -0.45
PHGDH-232ENST00000641947 TCTAP57738 103 aa12.23□□□□□ -0.45
PHGDH-232ENST00000641947 NANOS2P60321 138 aaKnown RBP12.23□□□□□ -0.45
PHGDH-232ENST00000641947 SPANXA1Q9NS26 97 aa12.23□□□□□ -0.45
PHGDH-232ENST00000641947 MEGF8Q7Z7M0 2845 aa12.23□□□□□ -0.45
PHGDH-232ENST00000641947 TRBV6-8A0A0A6YYG3 113 aa12.22□□□□□ -0.45
PHGDH-232ENST00000641947 AMELXQ99217 191 aa12.22□□□□□ -0.45
PHGDH-232ENST00000641947 TMEM243Q9BU79 118 aa12.21□□□□□ -0.45
PHGDH-232ENST00000641947 TRBV25-1A0A075B6N4 114 aa12.2□□□□□ -0.46
PHGDH-232ENST00000641947 IGLC3P0DOY3 106 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms