RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-231ENST00000641939 Q8N1X5 172 aa9.92□□□□□ -0.82
PHGDH-231ENST00000641939 RPL39LQ96EH5 51 aaKnown RBP9.92□□□□□ -0.82
PHGDH-231ENST00000641939 KRTAP4-5Q9BYR2 181 aa9.92□□□□□ -0.82
PHGDH-231ENST00000641939 DNAH8Q96JB1 4490 aa9.92□□□□□ -0.82
PHGDH-231ENST00000641939 LINC00269Q8N2A0 174 aa9.91□□□□□ -0.82
PHGDH-231ENST00000641939 DEFB104AQ8WTQ1 72 aa9.91□□□□□ -0.82
PHGDH-231ENST00000641939 TMEM191AQ9H0A3 160 aa9.91□□□□□ -0.82
PHGDH-231ENST00000641939 PRR34Q9NV39 138 aa9.91□□□□□ -0.82
PHGDH-231ENST00000641939 ABCA13Q86UQ4 5058 aa9.91□□□□□ -0.82
PHGDH-231ENST00000641939 A0A1B0GUV1 79 aa9.9□□□□□ -0.82
PHGDH-231ENST00000641939 UBE2L6O14933 153 aa9.9□□□□□ -0.82
PHGDH-231ENST00000641939 AMTP48728 403 aa9.9□□□□□ -0.82
PHGDH-231ENST00000641939 XGP55808 180 aa9.9□□□□□ -0.82
PHGDH-231ENST00000641939 NUP35Q8NFH5 326 aa9.9□□□□□ -0.82
PHGDH-231ENST00000641939 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.89□□□□□ -0.83
PHGDH-231ENST00000641939 RIGQ13278 110 aa9.89□□□□□ -0.83
PHGDH-231ENST00000641939 CLPSL2Q6UWE3 100 aa9.89□□□□□ -0.83
PHGDH-231ENST00000641939 NAT8BQ9UHF3 227 aa9.89□□□□□ -0.83
PHGDH-231ENST00000641939 SDHAF1A6NFY7 115 aa9.88□□□□□ -0.83
PHGDH-231ENST00000641939 NCR2O95944 276 aa9.88□□□□□ -0.83
PHGDH-231ENST00000641939 C20orf203Q8NBC4 194 aa9.88□□□□□ -0.83
PHGDH-231ENST00000641939 TMEM70Q9BUB7 260 aa9.88□□□□□ -0.83
PHGDH-231ENST00000641939 IGLV4-60A0A075B6I1 120 aa9.87□□□□□ -0.83
PHGDH-231ENST00000641939 TRBV6-5A0A0K0K1A5 114 aa9.87□□□□□ -0.83
PHGDH-231ENST00000641939 RAB4AP20338 218 aa9.87□□□□□ -0.83
PHGDH-231ENST00000641939 RAB14P61106 215 aa9.87□□□□□ -0.83
PHGDH-231ENST00000641939 REG3AQ06141 175 aa9.87□□□□□ -0.83
PHGDH-231ENST00000641939 C14orf177Q52M58 125 aa9.87□□□□□ -0.83
PHGDH-231ENST00000641939 RNF185Q96GF1 192 aa9.87□□□□□ -0.83
PHGDH-231ENST00000641939 SMIM27A0A1W2PRY6 76 aa9.86□□□□□ -0.83
PHGDH-231ENST00000641939 GAS8-AS1O95177 125 aa9.86□□□□□ -0.83
PHGDH-231ENST00000641939 HLA-DQA1P01909 254 aa9.86□□□□□ -0.83
PHGDH-231ENST00000641939 APCSP02743 223 aa9.86□□□□□ -0.83
PHGDH-231ENST00000641939 FAT1Q14517 4588 aa9.86□□□□□ -0.83
PHGDH-231ENST00000641939 AMN1Q8IY45 258 aa9.86□□□□□ -0.83
PHGDH-231ENST00000641939 MRAP2Q96G30 205 aa9.86□□□□□ -0.83
PHGDH-231ENST00000641939 ST20Q9HBF5 79 aa9.86□□□□□ -0.83
PHGDH-231ENST00000641939 I3L3M4 83 aa9.85□□□□□ -0.83
PHGDH-231ENST00000641939 PMCHP20382 165 aa9.85□□□□□ -0.83
PHGDH-231ENST00000641939 IGLV10-54A0A075B6I4 117 aa9.84□□□□□ -0.83
PHGDH-231ENST00000641939 TRAV8-4A0A0B4J246 113 aa9.84□□□□□ -0.83
PHGDH-231ENST00000641939 H7C423 109 aa9.84□□□□□ -0.83
PHGDH-231ENST00000641939 RPS10P46783 165 aaKnown RBP9.84□□□□□ -0.83
PHGDH-231ENST00000641939 KRTAP26-1Q6PEX3 210 aa9.84□□□□□ -0.83
PHGDH-231ENST00000641939 FAM30AQ9NZY2 134 aa9.84□□□□□ -0.83
PHGDH-231ENST00000641939 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.83□□□□□ -0.84
PHGDH-231ENST00000641939 IGKV2-29A2NJV5 120 aaPredicted RBP9.83□□□□□ -0.84
PHGDH-231ENST00000641939 USP17L23D6RBM5 183 aa9.83□□□□□ -0.84
PHGDH-231ENST00000641939 HAMPP81172 84 aa9.83□□□□□ -0.84
PHGDH-231ENST00000641939 AMMECR1LQ6DCA0 310 aa9.83□□□□□ -0.84
PHGDH-231ENST00000641939 A0A1B0GW15 77 aa9.82□□□□□ -0.84
PHGDH-231ENST00000641939 EPM2AB3EWF7 344 aa9.82□□□□□ -0.84
PHGDH-231ENST00000641939 SMKR1H3BMG3 65 aa9.82□□□□□ -0.84
PHGDH-231ENST00000641939 CAMPP49913 170 aa9.82□□□□□ -0.84
PHGDH-231ENST00000641939 POLR2KP53803 58 aaKnown RBP9.82□□□□□ -0.84
PHGDH-231ENST00000641939 VPS13BQ7Z7G8 4022 aa9.81□□□□□ -0.84
PHGDH-231ENST00000641939 TRBV27A0A0K0K1C4 114 aa9.81□□□□□ -0.84
PHGDH-231ENST00000641939 PPP1R17O96001 155 aa9.81□□□□□ -0.84
PHGDH-231ENST00000641939 TSHBP01222 138 aa9.81□□□□□ -0.84
PHGDH-231ENST00000641939 FGF6P10767 208 aa9.81□□□□□ -0.84
PHGDH-231ENST00000641939 LINC01620Q4KN68 170 aa9.81□□□□□ -0.84
PHGDH-231ENST00000641939 FAM104BQ5XKR9 115 aa9.81□□□□□ -0.84
PHGDH-231ENST00000641939 RNASEKQ6P5S7 137 aaKnown RBP9.81□□□□□ -0.84
PHGDH-231ENST00000641939 Q6ZSA8 131 aa9.81□□□□□ -0.84
PHGDH-231ENST00000641939 TMEM242Q9NWH2 141 aa9.81□□□□□ -0.84
PHGDH-231ENST00000641939 ESDP10768 282 aa9.8□□□□□ -0.84
PHGDH-231ENST00000641939 MRPL51Q4U2R6 128 aaKnown RBP9.8□□□□□ -0.84
PHGDH-231ENST00000641939 NRACQ8N912 160 aa9.8□□□□□ -0.84
PHGDH-231ENST00000641939 VCYO14598 125 aa9.79□□□□□ -0.84
PHGDH-231ENST00000641939 PPP1R2P9O14990 202 aa9.79□□□□□ -0.84
PHGDH-231ENST00000641939 SMR3BP02814 79 aaPredicted RBP9.79□□□□□ -0.84
PHGDH-231ENST00000641939 S100A8P05109 93 aa9.79□□□□□ -0.84
PHGDH-231ENST00000641939 PRSS1P07477 247 aa9.79□□□□□ -0.84
PHGDH-231ENST00000641939 ZNF25P17030 456 aaPredicted RBP9.79□□□□□ -0.84
PHGDH-231ENST00000641939 CLLU1Q5K131 121 aa9.79□□□□□ -0.84
PHGDH-231ENST00000641939 MRPL54Q6P161 138 aaKnown RBP9.79□□□□□ -0.84
PHGDH-231ENST00000641939 IGKV3OR2-268A0A0C4DH90 116 aa9.78□□□□□ -0.84
PHGDH-231ENST00000641939 LINC00862A6NCI5 91 aa9.78□□□□□ -0.84
PHGDH-231ENST00000641939 SUMO2P61956 95 aaKnown RBP9.78□□□□□ -0.84
PHGDH-231ENST00000641939 HBBP68871 147 aa9.78□□□□□ -0.84
PHGDH-231ENST00000641939 PNRC1Q12796 327 aaPredicted RBP9.78□□□□□ -0.84
PHGDH-231ENST00000641939 Q5VSD8 79 aa9.78□□□□□ -0.84
PHGDH-231ENST00000641939 CLRN3Q8NCR9 226 aa9.78□□□□□ -0.84
PHGDH-231ENST00000641939 TMEM101Q96IK0 257 aa9.78□□□□□ -0.84
PHGDH-231ENST00000641939 A0A1B0GXF2 115 aa9.77□□□□□ -0.85
PHGDH-231ENST00000641939 F8W036 122 aa9.77□□□□□ -0.85
PHGDH-231ENST00000641939 FCER1GP30273 86 aa9.77□□□□□ -0.85
PHGDH-231ENST00000641939 DGAT2L7PQ6IED9 249 aa9.77□□□□□ -0.85
PHGDH-231ENST00000641939 BTF3L4Q96K17 158 aa9.77□□□□□ -0.85
PHGDH-231ENST00000641939 C7orf77A4D0Y5 90 aa9.76□□□□□ -0.85
PHGDH-231ENST00000641939 CKS2P33552 79 aa9.76□□□□□ -0.85
PHGDH-231ENST00000641939 ATP5L2Q7Z4Y8 100 aa9.76□□□□□ -0.85
PHGDH-231ENST00000641939 C20orf78Q9BR46 151 aa9.76□□□□□ -0.85
PHGDH-231ENST00000641939 SRRM2Q9UQ35 2752 aaKnown RBP9.76□□□□□ -0.85
PHGDH-231ENST00000641939 TRBV24-1A0A075B6N3 115 aa9.75□□□□□ -0.85
PHGDH-231ENST00000641939 GAGE12HA6NDE8 117 aa9.75□□□□□ -0.85
PHGDH-231ENST00000641939 FAM229AH3BQW9 127 aa9.75□□□□□ -0.85
PHGDH-231ENST00000641939 MT-ND4LP03901 98 aa9.75□□□□□ -0.85
PHGDH-231ENST00000641939 MRPL52Q86TS9 123 aaKnown RBP9.75□□□□□ -0.85
PHGDH-231ENST00000641939 OR5A1Q8NGJ0 315 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms