RNA–Protein interactions for RNA: ENST00000640916.1

SCARB2-226, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 689 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-226ENST00000640916 C1orf137Q5JT78 98 aa4.79□□□□□ -1.64
SCARB2-226ENST00000640916 RNASEKQ6P5S7 137 aaKnown RBP4.79□□□□□ -1.64
SCARB2-226ENST00000640916 KRTAP11-1Q8IUC1 163 aa4.79□□□□□ -1.64
SCARB2-226ENST00000640916 DEDD2Q8WXF8 326 aa4.79□□□□□ -1.64
SCARB2-226ENST00000640916 DIRC1Q969H9 104 aa4.79□□□□□ -1.64
SCARB2-226ENST00000640916 KRTAP4-1Q9BYQ7 146 aa4.79□□□□□ -1.64
SCARB2-226ENST00000640916 TRBV6-1A0A0K0K1D8 114 aa4.78□□□□□ -1.64
SCARB2-226ENST00000640916 A0A1B0GUV1 79 aa4.78□□□□□ -1.64
SCARB2-226ENST00000640916 SIX6O95475 246 aa4.78□□□□□ -1.64
SCARB2-226ENST00000640916 MT-ND6P03923 174 aa4.78□□□□□ -1.64
SCARB2-226ENST00000640916 IQCJQ1A5X6 159 aa4.78□□□□□ -1.64
SCARB2-226ENST00000640916 OR11H4Q8NGC9 324 aa4.78□□□□□ -1.64
SCARB2-226ENST00000640916 OR5C1Q8NGR4 320 aa4.78□□□□□ -1.64
SCARB2-226ENST00000640916 ENKURQ8TC29 256 aa4.78□□□□□ -1.64
SCARB2-226ENST00000640916 S100ZQ8WXG8 99 aa4.78□□□□□ -1.64
SCARB2-226ENST00000640916 NDFIP1Q9BT67 221 aa4.78□□□□□ -1.64
SCARB2-226ENST00000640916 CCDC32Q9BV29 185 aa4.78□□□□□ -1.64
SCARB2-226ENST00000640916 KRBOX1C9JBD0 128 aa4.77□□□□□ -1.65
SCARB2-226ENST00000640916 UPK1BO75841 260 aa4.77□□□□□ -1.65
SCARB2-226ENST00000640916 TCRAP04437 139 aa4.77□□□□□ -1.65
SCARB2-226ENST00000640916 CRIP1P50238 77 aa4.77□□□□□ -1.65
SCARB2-226ENST00000640916 RAB4BP61018 213 aa4.77□□□□□ -1.65
SCARB2-226ENST00000640916 HBG1P69891 147 aa4.77□□□□□ -1.65
SCARB2-226ENST00000640916 HBG2P69892 147 aa4.77□□□□□ -1.65
SCARB2-226ENST00000640916 GAGE2BQ13066 116 aa4.77□□□□□ -1.65
SCARB2-226ENST00000640916 UBE2V1Q13404 147 aa4.77□□□□□ -1.65
SCARB2-226ENST00000640916 GAGE2EQ4V326 116 aa4.77□□□□□ -1.65
SCARB2-226ENST00000640916 KHDC3LQ587J8 217 aa4.77□□□□□ -1.65
SCARB2-226ENST00000640916 C6orf226Q5I0X4 101 aa4.77□□□□□ -1.65
SCARB2-226ENST00000640916 FAM74A1Q5RGS3 127 aa4.77□□□□□ -1.65
SCARB2-226ENST00000640916 GAGE2AQ6NT46 116 aa4.77□□□□□ -1.65
SCARB2-226ENST00000640916 DERL1Q9BUN8 251 aa4.77□□□□□ -1.65
SCARB2-226ENST00000640916 WDR61Q9GZS3 305 aaKnown RBP4.77□□□□□ -1.65
SCARB2-226ENST00000640916 GAGE2DQ9UEU5 116 aa4.77□□□□□ -1.65
SCARB2-226ENST00000640916 TRBV25-1A0A075B6N4 114 aa4.76□□□□□ -1.65
SCARB2-226ENST00000640916 GRIFINA4D1Z8 144 aa4.76□□□□□ -1.65
SCARB2-226ENST00000640916 B4DEV8 164 aa4.76□□□□□ -1.65
SCARB2-226ENST00000640916 M0R381 172 aa4.76□□□□□ -1.65
SCARB2-226ENST00000640916 AMTP48728 403 aa4.76□□□□□ -1.65
SCARB2-226ENST00000640916 FLI1Q01543 452 aaPredicted RBP4.76□□□□□ -1.65
SCARB2-226ENST00000640916 RGS21Q2M5E4 152 aa4.76□□□□□ -1.65
SCARB2-226ENST00000640916 KRTAP15-1Q3LI76 137 aa4.76□□□□□ -1.65
SCARB2-226ENST00000640916 LRRC37A5PQ49AS3 106 aa4.76□□□□□ -1.65
SCARB2-226ENST00000640916 PHF5AQ7RTV0 110 aaKnown RBP4.76□□□□□ -1.65
SCARB2-226ENST00000640916 PRNTQ86SH4 94 aa4.76□□□□□ -1.65
SCARB2-226ENST00000640916 LINC00526Q96FQ7 95 aa4.76□□□□□ -1.65
SCARB2-226ENST00000640916 TRAV1-1A0A0B4J248 108 aa4.75□□□□□ -1.65
SCARB2-226ENST00000640916 FABP5P3A8MUU1 101 aa4.75□□□□□ -1.65
SCARB2-226ENST00000640916 RAB2AP61019 212 aa4.75□□□□□ -1.65
SCARB2-226ENST00000640916 PNRC1Q12796 327 aaPredicted RBP4.75□□□□□ -1.65
SCARB2-226ENST00000640916 TMEM97Q5BJF2 176 aa4.75□□□□□ -1.65
SCARB2-226ENST00000640916 STX12Q86Y82 276 aa4.75□□□□□ -1.65
SCARB2-226ENST00000640916 CSDC2Q9Y534 153 aaKnown RBP4.75□□□□□ -1.65
SCARB2-226ENST00000640916 IGHV1-24A0A0C4DH33 117 aa4.74□□□□□ -1.65
SCARB2-226ENST00000640916 INMT-MINDY4F8WBC2 141 aa4.74□□□□□ -1.65
SCARB2-226ENST00000640916 TEX46H3BTG2 121 aa4.74□□□□□ -1.65
SCARB2-226ENST00000640916 M0R036 132 aa4.74□□□□□ -1.65
SCARB2-226ENST00000640916 RPL13AP40429 203 aaKnown RBP4.74□□□□□ -1.65
SCARB2-226ENST00000640916 TAS2R45P59539 299 aa4.74□□□□□ -1.65
SCARB2-226ENST00000640916 CYCSP99999 105 aaKnown RBP4.74□□□□□ -1.65
SCARB2-226ENST00000640916 TPRXLQ17RH7 258 aa4.74□□□□□ -1.65
SCARB2-226ENST00000640916 ZFP69Q49AA0 526 aa4.74□□□□□ -1.65
SCARB2-226ENST00000640916 C9orf116Q5BN46 136 aaPredicted RBP4.74□□□□□ -1.65
SCARB2-226ENST00000640916 SAPCD1Q5SSQ6 148 aa4.74□□□□□ -1.65
SCARB2-226ENST00000640916 C5orf17Q8NAS9 161 aa4.74□□□□□ -1.65
SCARB2-226ENST00000640916 AQP10Q96PS8 301 aa4.74□□□□□ -1.65
SCARB2-226ENST00000640916 PHLDA3Q9Y5J5 127 aa4.74□□□□□ -1.65
SCARB2-226ENST00000640916 SSNA1O43805 119 aa4.73□□□□□ -1.65
SCARB2-226ENST00000640916 PVALBP20472 110 aaPredicted RBP4.73□□□□□ -1.65
SCARB2-226ENST00000640916 FHITP49789 147 aa4.73□□□□□ -1.65
SCARB2-226ENST00000640916 UBE2D1P51668 147 aa4.73□□□□□ -1.65
SCARB2-226ENST00000640916 ZNF56Q15929 161 aa4.73□□□□□ -1.65
SCARB2-226ENST00000640916 Q6ZNX1 250 aa4.73□□□□□ -1.65
SCARB2-226ENST00000640916 ZFP82Q8N141 532 aa4.73□□□□□ -1.65
SCARB2-226ENST00000640916 CARD19Q96LW7 228 aa4.73□□□□□ -1.65
SCARB2-226ENST00000640916 RETNLBQ9BQ08 111 aa4.73□□□□□ -1.65
SCARB2-226ENST00000640916 ZNF471Q9BX82 626 aaPredicted RBP4.73□□□□□ -1.65
SCARB2-226ENST00000640916 RPP21Q9H633 154 aaKnown RBP4.73□□□□□ -1.65
SCARB2-226ENST00000640916 BATF3Q9NR55 127 aa4.73□□□□□ -1.65
SCARB2-226ENST00000640916 KCNIP2Q9NS61 270 aa4.73□□□□□ -1.65
SCARB2-226ENST00000640916 CARHSP1Q9Y2V2 147 aaKnown RBP4.73□□□□□ -1.65
SCARB2-226ENST00000640916 ARL2-SNX15V9GYD0 113 aa4.73□□□□□ -1.65
SCARB2-226ENST00000640916 HMGB3O15347 200 aaKnown RBP4.72□□□□□ -1.65
SCARB2-226ENST00000640916 TPT1P13693 172 aaKnown RBP4.72□□□□□ -1.65
SCARB2-226ENST00000640916 DEFA1P59665 94 aa4.72□□□□□ -1.65
SCARB2-226ENST00000640916 DEFA3P59666 94 aa4.72□□□□□ -1.65
SCARB2-226ENST00000640916 LINC00299Q6ZSB3 139 aa4.72□□□□□ -1.65
SCARB2-226ENST00000640916 CHCHD10Q8WYQ3 142 aaPredicted RBP4.72□□□□□ -1.65
SCARB2-226ENST00000640916 EPDR1Q9UM22 224 aa4.72□□□□□ -1.65
SCARB2-226ENST00000640916 C17orf112F2Z3M2 114 aa4.71□□□□□ -1.66
SCARB2-226ENST00000640916 H0YIZ8 118 aa4.71□□□□□ -1.66
SCARB2-226ENST00000640916 SH2D1AO60880 128 aa4.71□□□□□ -1.66
SCARB2-226ENST00000640916 SULT1A2P50226 295 aa4.71□□□□□ -1.66
SCARB2-226ENST00000640916 H2BFSP57053 126 aa4.71□□□□□ -1.66
SCARB2-226ENST00000640916 COX8CQ7Z4L0 72 aa4.71□□□□□ -1.66
SCARB2-226ENST00000640916 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.71□□□□□ -1.66
SCARB2-226ENST00000640916 TMEM243Q9BU79 118 aa4.71□□□□□ -1.66
SCARB2-226ENST00000640916 SMIM3Q9BZL3 60 aa4.71□□□□□ -1.66
SCARB2-226ENST00000640916 PKIGQ9Y2B9 76 aa4.71□□□□□ -1.66
SCARB2-226ENST00000640916 ALG5Q9Y673 324 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms