RNA–Protein interactions for RNA: ENST00000640657.1

HNRNPU-230, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 4,323 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-230ENST00000640657 SIRPDQ9H106 197 aa3.76□□□□□ -1.81
HNRNPU-230ENST00000640657 KIAA1549Q9HCM3 1950 aa3.76□□□□□ -1.81
HNRNPU-230ENST00000640657 IGKV3D-7A0A0C4DH55 119 aa3.76□□□□□ -1.81
HNRNPU-230ENST00000640657 TRBV10-1A0A0K0K1A3 114 aa3.76□□□□□ -1.81
HNRNPU-230ENST00000640657 A0A1W2PNU3 283 aaPredicted RBP3.76□□□□□ -1.81
HNRNPU-230ENST00000640657 KLLNB2CW77 178 aa3.76□□□□□ -1.81
HNRNPU-230ENST00000640657 TSHBP01222 138 aa3.76□□□□□ -1.81
HNRNPU-230ENST00000640657 FBXL19-AS1Q494R0 122 aa3.76□□□□□ -1.81
HNRNPU-230ENST00000640657 C9orf85Q96MD7 179 aa3.76□□□□□ -1.81
HNRNPU-230ENST00000640657 DSCR8Q96T75 97 aa3.76□□□□□ -1.81
HNRNPU-230ENST00000640657 PRORYQ9H606 182 aa3.76□□□□□ -1.81
HNRNPU-230ENST00000640657 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.76□□□□□ -1.81
HNRNPU-230ENST00000640657 IGKV2-29A2NJV5 120 aaPredicted RBP3.76□□□□□ -1.81
HNRNPU-230ENST00000640657 ATP5J2P56134 94 aa3.76□□□□□ -1.81
HNRNPU-230ENST00000640657 DEFB131AP59861 70 aa3.76□□□□□ -1.81
HNRNPU-230ENST00000640657 COX7B2Q8TF08 81 aa3.76□□□□□ -1.81
HNRNPU-230ENST00000640657 CSDC2Q9Y534 153 aaKnown RBP3.76□□□□□ -1.81
HNRNPU-230ENST00000640657 DOCK7Q96N67 2140 aa3.76□□□□□ -1.81
HNRNPU-230ENST00000640657 TRAV12-2A0A075B6T6 113 aa3.76□□□□□ -1.81
HNRNPU-230ENST00000640657 FAM236DA0A1B0GTK5 79 aa3.76□□□□□ -1.81
HNRNPU-230ENST00000640657 FAM236CP0DP71 79 aa3.76□□□□□ -1.81
HNRNPU-230ENST00000640657 Q6ZQT7 251 aa3.76□□□□□ -1.81
HNRNPU-230ENST00000640657 C20orf173Q96LM9 149 aa3.76□□□□□ -1.81
HNRNPU-230ENST00000640657 CCL19Q99731 98 aa3.76□□□□□ -1.81
HNRNPU-230ENST00000640657 DSPP15924 2871 aaKnown RBP3.75□□□□□ -1.81
HNRNPU-230ENST00000640657 SPRY2O43597 315 aa3.75□□□□□ -1.81
HNRNPU-230ENST00000640657 CRLF1O75462 422 aa3.75□□□□□ -1.81
HNRNPU-230ENST00000640657 BRI3O95415 125 aa3.75□□□□□ -1.81
HNRNPU-230ENST00000640657 IGF1P05019 195 aa3.75□□□□□ -1.81
HNRNPU-230ENST00000640657 CRYGAP11844 174 aa3.75□□□□□ -1.81
HNRNPU-230ENST00000640657 CRIP2P52943 208 aaPredicted RBP3.75□□□□□ -1.81
HNRNPU-230ENST00000640657 RBM3P98179 157 aaKnown RBP3.75□□□□□ -1.81
HNRNPU-230ENST00000640657 SHISA2Q6UWI4 295 aa3.75□□□□□ -1.81
HNRNPU-230ENST00000640657 C3orf56Q8N813 242 aa3.75□□□□□ -1.81
HNRNPU-230ENST00000640657 LINC01600Q96MT4 127 aa3.75□□□□□ -1.81
HNRNPU-230ENST00000640657 OPRPNQ99935 248 aaPredicted RBP3.75□□□□□ -1.81
HNRNPU-230ENST00000640657 TNCP24821 2201 aa3.75□□□□□ -1.81
HNRNPU-230ENST00000640657 DYSFO75923 2080 aa3.75□□□□□ -1.81
HNRNPU-230ENST00000640657 NBEAQ8NFP9 2946 aa3.75□□□□□ -1.81
HNRNPU-230ENST00000640657 DOCK10Q96BY6 2186 aa3.75□□□□□ -1.81
HNRNPU-230ENST00000640657 B4DSR2 109 aa3.75□□□□□ -1.81
HNRNPU-230ENST00000640657 GTF3C1Q12789 2109 aa3.75□□□□□ -1.81
HNRNPU-230ENST00000640657 PCNX2A6NKB5 2137 aa3.75□□□□□ -1.81
HNRNPU-230ENST00000640657 CLPSL1A2RUU4 121 aa3.75□□□□□ -1.81
HNRNPU-230ENST00000640657 F8W735 103 aaPredicted RBP3.75□□□□□ -1.81
HNRNPU-230ENST00000640657 CRYGDP07320 174 aa3.75□□□□□ -1.81
HNRNPU-230ENST00000640657 TSPEAR-AS2P59090 65 aa3.74□□□□□ -1.81
HNRNPU-230ENST00000640657 AMELXQ99217 191 aa3.74□□□□□ -1.81
HNRNPU-230ENST00000640657 CNOT1A5YKK6 2376 aaKnown RBP3.74□□□□□ -1.81
HNRNPU-230ENST00000640657 SPTBN4Q9H254 2564 aa3.74□□□□□ -1.81
HNRNPU-230ENST00000640657 USP17L23D6RBM5 183 aa3.74□□□□□ -1.81
HNRNPU-230ENST00000640657 BCE1O60756 84 aa3.74□□□□□ -1.81
HNRNPU-230ENST00000640657 APRG1Q8IVJ8 170 aa3.74□□□□□ -1.81
HNRNPU-230ENST00000640657 HAMPP81172 84 aa3.74□□□□□ -1.81
HNRNPU-230ENST00000640657 RNASE13Q5GAN3 156 aaKnown RBP3.74□□□□□ -1.81
HNRNPU-230ENST00000640657 PRR9Q5T870 116 aa3.74□□□□□ -1.81
HNRNPU-230ENST00000640657 C1orf43Q9BWL3 253 aa3.74□□□□□ -1.81
HNRNPU-230ENST00000640657 BPESC1Q9GZL8 116 aa3.74□□□□□ -1.81
HNRNPU-230ENST00000640657 IGHV3-38A0A0C4DH36 116 aa3.74□□□□□ -1.81
HNRNPU-230ENST00000640657 LECT2O14960 151 aa3.74□□□□□ -1.81
HNRNPU-230ENST00000640657 FAM19A5Q7Z5A7 132 aaPredicted RBP3.74□□□□□ -1.81
HNRNPU-230ENST00000640657 SVILO95425 2214 aa3.73□□□□□ -1.81
HNRNPU-230ENST00000640657 IBA57-AS1B1ANH7 110 aa3.73□□□□□ -1.81
HNRNPU-230ENST00000640657 K7EQD1 137 aa3.73□□□□□ -1.81
HNRNPU-230ENST00000640657 J3QLI3 93 aa3.73□□□□□ -1.81
HNRNPU-230ENST00000640657 LY6HO94772 140 aa3.73□□□□□ -1.81
HNRNPU-230ENST00000640657 RPL28P46779 137 aaKnown RBP3.73□□□□□ -1.81
HNRNPU-230ENST00000640657 KLK9Q2XQG4 91 aa3.73□□□□□ -1.81
HNRNPU-230ENST00000640657 UNQ9165/PRO28630Q6UXU0 137 aa3.73□□□□□ -1.81
HNRNPU-230ENST00000640657 CDKN2A-AS1Q9UH64 79 aa3.73□□□□□ -1.81
HNRNPU-230ENST00000640657 SERP1Q9Y6X1 66 aa3.73□□□□□ -1.81
HNRNPU-230ENST00000640657 K7EQG2 157 aa3.73□□□□□ -1.81
HNRNPU-230ENST00000640657 IGHV3-53P01767 116 aa3.73□□□□□ -1.81
HNRNPU-230ENST00000640657 PFN2P35080 140 aa3.73□□□□□ -1.81
HNRNPU-230ENST00000640657 SDIM1Q6ZPB5 146 aa3.73□□□□□ -1.81
HNRNPU-230ENST00000640657 C14orf132Q9NPU4 83 aa3.73□□□□□ -1.81
HNRNPU-230ENST00000640657 KIF25-AS1Q9Y6Z4 181 aa3.73□□□□□ -1.81
HNRNPU-230ENST00000640657 MALRD1Q5VYJ5 2156 aa3.73□□□□□ -1.81
HNRNPU-230ENST00000640657 CACNA1GO43497 2377 aa3.73□□□□□ -1.81
HNRNPU-230ENST00000640657 SMIM26A0A096LP01 95 aa3.72□□□□□ -1.81
HNRNPU-230ENST00000640657 F5H768 121 aa3.72□□□□□ -1.81
HNRNPU-230ENST00000640657 BRD3OSQ6XYD6 125 aa3.72□□□□□ -1.81
HNRNPU-230ENST00000640657 MIR7-3HGQ8N6C7 128 aa3.72□□□□□ -1.81
HNRNPU-230ENST00000640657 PPDPFQ9H3Y8 114 aa3.72□□□□□ -1.81
HNRNPU-230ENST00000640657 UBE2D4Q9Y2X8 147 aa3.72□□□□□ -1.81
HNRNPU-230ENST00000640657 CEP295Q9C0D2 2601 aa3.72□□□□□ -1.81
HNRNPU-230ENST00000640657 MSMBP08118 114 aa3.72□□□□□ -1.81
HNRNPU-230ENST00000640657 NHLRC4P0CG21 123 aaPredicted RBP3.72□□□□□ -1.81
HNRNPU-230ENST00000640657 TPRP12270 2363 aaKnown RBP3.72□□□□□ -1.81
HNRNPU-230ENST00000640657 TRBV10-3A0A0K0K1G6 114 aa3.72□□□□□ -1.81
HNRNPU-230ENST00000640657 ICE1Q9Y2F5 2266 aa3.72□□□□□ -1.81
HNRNPU-230ENST00000640657 TRAV25A0A0B4J276 109 aa3.71□□□□□ -1.81
HNRNPU-230ENST00000640657 A6NDX4 124 aa3.71□□□□□ -1.81
HNRNPU-230ENST00000640657 RS1O15537 224 aa3.71□□□□□ -1.81
HNRNPU-230ENST00000640657 Q9HAA7 133 aa3.71□□□□□ -1.81
HNRNPU-230ENST00000640657 TET2Q6N021 2002 aaPredicted RBP3.71□□□□□ -1.81
HNRNPU-230ENST00000640657 AKAP13Q12802 2813 aa3.71□□□□□ -1.81
HNRNPU-230ENST00000640657 HOXD3P31249 432 aaPredicted RBP3.71□□□□□ -1.82
HNRNPU-230ENST00000640657 UPK3BQ9BT76 320 aa3.71□□□□□ -1.82
HNRNPU-230ENST00000640657 ZFP36P26651 326 aaKnown RBP3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms