RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 Q6ZTI0 123 aa13.92□□□□□ -0.18
SCARB2-213ENST00000638680 TRIAP1O43715 76 aa13.92□□□□□ -0.18
SCARB2-213ENST00000638680 IGLV4-3A0A075B6K6 122 aa13.91□□□□□ -0.18
SCARB2-213ENST00000638680 PRO0255Q9UI72 69 aa13.91□□□□□ -0.18
SCARB2-213ENST00000638680 KIAA1549LQ6ZVL6 1849 aa13.91□□□□□ -0.18
SCARB2-213ENST00000638680 UQCRQO14949 82 aa13.91□□□□□ -0.18
SCARB2-213ENST00000638680 MYCNOSP40205 109 aa13.91□□□□□ -0.18
SCARB2-213ENST00000638680 ODF3Q96PU9 254 aa13.9□□□□□ -0.18
SCARB2-213ENST00000638680 SLPIP03973 132 aa13.9□□□□□ -0.18
SCARB2-213ENST00000638680 ZNF106Q9H2Y7 1883 aaKnown RBP13.9□□□□□ -0.18
SCARB2-213ENST00000638680 SMAD5-AS1Q9Y6J3 95 aa13.89□□□□□ -0.19
SCARB2-213ENST00000638680 C20orf197Q8N268 126 aa13.89□□□□□ -0.19
SCARB2-213ENST00000638680 LINC00269Q8N2A0 174 aa13.88□□□□□ -0.19
SCARB2-213ENST00000638680 LINC00308Q8TCZ7 52 aa13.88□□□□□ -0.19
SCARB2-213ENST00000638680 C2orf91Q6ZV80 131 aa13.88□□□□□ -0.19
SCARB2-213ENST00000638680 IGLV2-11P01706 119 aa13.87□□□□□ -0.19
SCARB2-213ENST00000638680 BPY2O14599 106 aa13.87□□□□□ -0.19
SCARB2-213ENST00000638680 C3orf22Q8N5N4 141 aa13.87□□□□□ -0.19
SCARB2-213ENST00000638680 TRBV30A0A0K0K1B3 111 aa13.86□□□□□ -0.19
SCARB2-213ENST00000638680 PIK3CD-AS1Q5SR53 167 aa13.86□□□□□ -0.19
SCARB2-213ENST00000638680 H0Y9J4 135 aa13.86□□□□□ -0.19
SCARB2-213ENST00000638680 TMEM131Q92545 1883 aa13.86□□□□□ -0.19
SCARB2-213ENST00000638680 FBXL19-AS1Q494R0 122 aa13.86□□□□□ -0.19
SCARB2-213ENST00000638680 ENHOQ6UWT2 76 aa13.86□□□□□ -0.19
SCARB2-213ENST00000638680 Q8NA96 180 aa13.86□□□□□ -0.19
SCARB2-213ENST00000638680 ZFAND3Q9H8U3 227 aa13.85□□□□□ -0.19
SCARB2-213ENST00000638680 M0QY20 66 aa13.85□□□□□ -0.19
SCARB2-213ENST00000638680 REG3AQ06141 175 aa13.85□□□□□ -0.19
SCARB2-213ENST00000638680 K7EQG2 157 aa13.84□□□□□ -0.19
SCARB2-213ENST00000638680 MRPS12O15235 138 aaKnown RBP13.84□□□□□ -0.19
SCARB2-213ENST00000638680 LMO4P61968 165 aa13.84□□□□□ -0.19
SCARB2-213ENST00000638680 ADAMTS9Q9P2N4 1935 aa13.84□□□□□ -0.19
SCARB2-213ENST00000638680 UFSP1Q6NVU6 142 aa13.84□□□□□ -0.19
SCARB2-213ENST00000638680 C22orf34Q6ZV56 151 aa13.84□□□□□ -0.19
SCARB2-213ENST00000638680 SCXQ7RTU7 201 aa13.84□□□□□ -0.19
SCARB2-213ENST00000638680 NCOA6Q14686 2063 aaPredicted RBP13.84□□□□□ -0.19
SCARB2-213ENST00000638680 FREM1Q5H8C1 2179 aa13.84□□□□□ -0.19
SCARB2-213ENST00000638680 MPLKIPQ8TAP9 179 aa13.83□□□□□ -0.19
SCARB2-213ENST00000638680 FAM236DA0A1B0GTK5 79 aa13.83□□□□□ -0.2
SCARB2-213ENST00000638680 TNFRSF13BO14836 293 aaPredicted RBP13.83□□□□□ -0.2
SCARB2-213ENST00000638680 FAM236CP0DP71 79 aa13.83□□□□□ -0.2
SCARB2-213ENST00000638680 CHCHD10Q8WYQ3 142 aaPredicted RBP13.82□□□□□ -0.2
SCARB2-213ENST00000638680 ALPK3Q96L96 1907 aa13.82□□□□□ -0.2
SCARB2-213ENST00000638680 PROK1P58294 105 aa13.82□□□□□ -0.2
SCARB2-213ENST00000638680 DSCAML1Q8TD84 2053 aa13.82□□□□□ -0.2
SCARB2-213ENST00000638680 CFAP126Q5VTH2 177 aa13.81□□□□□ -0.2
SCARB2-213ENST00000638680 C2orf16Q68DN1 1984 aa13.81□□□□□ -0.2
SCARB2-213ENST00000638680 LY6LH3BQJ8 138 aa13.81□□□□□ -0.2
SCARB2-213ENST00000638680 A8MZ25 164 aa13.81□□□□□ -0.2
SCARB2-213ENST00000638680 DNAJC9-AS1A6NH13 148 aa13.8□□□□□ -0.2
SCARB2-213ENST00000638680 NRACQ8N912 160 aa13.8□□□□□ -0.2
SCARB2-213ENST00000638680 SVIPQ8NHG7 77 aa13.8□□□□□ -0.2
SCARB2-213ENST00000638680 H7C423 109 aa13.79□□□□□ -0.2
SCARB2-213ENST00000638680 IBA57-AS1B1ANH7 110 aa13.79□□□□□ -0.2
SCARB2-213ENST00000638680 PCNX2A6NKB5 2137 aa13.79□□□□□ -0.2
SCARB2-213ENST00000638680 ATP5EP2Q5VTU8 51 aa13.79□□□□□ -0.2
SCARB2-213ENST00000638680 NUP210LQ5VU65 1888 aa13.77□□□□□ -0.21
SCARB2-213ENST00000638680 DEFB114Q30KQ6 69 aa13.77□□□□□ -0.21
SCARB2-213ENST00000638680 PLCE1Q9P212 2302 aa13.77□□□□□ -0.21
SCARB2-213ENST00000638680 TRBV27A0A0K0K1C4 114 aa13.76□□□□□ -0.21
SCARB2-213ENST00000638680 FAM222AQ5U5X8 452 aa13.76□□□□□ -0.21
SCARB2-213ENST00000638680 IGKV2-24A0A0C4DH68 120 aa13.75□□□□□ -0.21
SCARB2-213ENST00000638680 EBI3Q14213 229 aa13.75□□□□□ -0.21
SCARB2-213ENST00000638680 SPTSSBQ8NFR3 76 aa13.75□□□□□ -0.21
SCARB2-213ENST00000638680 GAS8-AS1O95177 125 aa13.75□□□□□ -0.21
SCARB2-213ENST00000638680 TSHBP01222 138 aa13.75□□□□□ -0.21
SCARB2-213ENST00000638680 B9D2Q9BPU9 175 aa13.75□□□□□ -0.21
SCARB2-213ENST00000638680 C11orf21Q9P2W6 132 aa13.75□□□□□ -0.21
SCARB2-213ENST00000638680 IGKV4-1P06312 121 aa13.74□□□□□ -0.21
SCARB2-213ENST00000638680 HIGD2AQ9BW72 106 aa13.74□□□□□ -0.21
SCARB2-213ENST00000638680 INSL3P51460 131 aa13.74□□□□□ -0.21
SCARB2-213ENST00000638680 PRR9Q5T870 116 aa13.74□□□□□ -0.21
SCARB2-213ENST00000638680 PYGO1Q9Y3Y4 419 aa13.74□□□□□ -0.21
SCARB2-213ENST00000638680 RNASE3P12724 160 aaKnown RBP13.73□□□□□ -0.21
SCARB2-213ENST00000638680 Q6ZS46 218 aa13.73□□□□□ -0.21
SCARB2-213ENST00000638680 TRBV6-5A0A0K0K1A5 114 aa13.73□□□□□ -0.21
SCARB2-213ENST00000638680 Q6YL49 198 aa13.73□□□□□ -0.21
SCARB2-213ENST00000638680 TRBV6-8A0A0A6YYG3 113 aa13.72□□□□□ -0.21
SCARB2-213ENST00000638680 CCDC179H3BU77 68 aa13.72□□□□□ -0.21
SCARB2-213ENST00000638680 C19orf84I3L1E1 186 aa13.72□□□□□ -0.21
SCARB2-213ENST00000638680 XGP55808 180 aa13.72□□□□□ -0.21
SCARB2-213ENST00000638680 DCANP1Q8TF63 244 aa13.72□□□□□ -0.21
SCARB2-213ENST00000638680 C6orf99Q4VX62 202 aa13.72□□□□□ -0.21
SCARB2-213ENST00000638680 NDUFA7O95182 113 aa13.71□□□□□ -0.21
SCARB2-213ENST00000638680 LINC00310P59036 64 aa13.71□□□□□ -0.21
SCARB2-213ENST00000638680 NDUFC2-KCTD14E9PQ53 114 aa13.71□□□□□ -0.21
SCARB2-213ENST00000638680 FSTL3O95633 263 aa13.71□□□□□ -0.21
SCARB2-213ENST00000638680 MED12LQ86YW9 2145 aa13.71□□□□□ -0.21
SCARB2-213ENST00000638680 C10orf99Q6UWK7 81 aa13.71□□□□□ -0.22
SCARB2-213ENST00000638680 XAGE1AQ9HD64 81 aa13.71□□□□□ -0.22
SCARB2-213ENST00000638680 TIMM17BO60830 172 aa13.7□□□□□ -0.22
SCARB2-213ENST00000638680 LST1O00453 97 aa13.7□□□□□ -0.22
SCARB2-213ENST00000638680 PCNX3Q9H6A9 2034 aa13.7□□□□□ -0.22
SCARB2-213ENST00000638680 LYRM9A8MSI8 78 aa13.7□□□□□ -0.22
SCARB2-213ENST00000638680 Q8N976 141 aa13.7□□□□□ -0.22
SCARB2-213ENST00000638680 KIAA1549Q9HCM3 1950 aa13.7□□□□□ -0.22
SCARB2-213ENST00000638680 A0A0U1RQV1 116 aa13.69□□□□□ -0.22
SCARB2-213ENST00000638680 A0A096LNI7 61 aa13.69□□□□□ -0.22
SCARB2-213ENST00000638680 SERP2Q8N6R1 65 aa13.68□□□□□ -0.22
SCARB2-213ENST00000638680 C11orf45Q8TAV5 145 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms