RNA–Protein interactions for RNA: ENST00000638567.1

SCARB2-210, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 4,415 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-210ENST00000638567 TET2Q6N021 2002 aaPredicted RBP12.49□□□□□ -0.41
SCARB2-210ENST00000638567 A0A0J9YXY3 114 aa12.49□□□□□ -0.41
SCARB2-210ENST00000638567 C10orf99Q6UWK7 81 aa12.48□□□□□ -0.41
SCARB2-210ENST00000638567 ATP6V0E2Q8NHE4 81 aa12.48□□□□□ -0.41
SCARB2-210ENST00000638567 CRLF1O75462 422 aa12.48□□□□□ -0.41
SCARB2-210ENST00000638567 CNFNQ9BYD5 112 aa12.48□□□□□ -0.41
SCARB2-210ENST00000638567 ZNF561-AS1K7EIQ3 104 aa12.48□□□□□ -0.41
SCARB2-210ENST00000638567 RNASE3P12724 160 aaKnown RBP12.48□□□□□ -0.41
SCARB2-210ENST00000638567 UBL5Q9BZL1 73 aa12.48□□□□□ -0.41
SCARB2-210ENST00000638567 CLPSL1A2RUU4 121 aa12.47□□□□□ -0.41
SCARB2-210ENST00000638567 ZNF22P17026 224 aaPredicted RBP12.47□□□□□ -0.41
SCARB2-210ENST00000638567 HAMPP81172 84 aa12.47□□□□□ -0.41
SCARB2-210ENST00000638567 SS18L2Q9UHA2 77 aa12.47□□□□□ -0.41
SCARB2-210ENST00000638567 TRAV4A0A0B4J268 109 aa12.47□□□□□ -0.41
SCARB2-210ENST00000638567 LGALS9O00182 355 aa12.47□□□□□ -0.41
SCARB2-210ENST00000638567 M0QY20 66 aa12.46□□□□□ -0.41
SCARB2-210ENST00000638567 UNC80Q8N2C7 3258 aa12.46□□□□□ -0.42
SCARB2-210ENST00000638567 NFE4Q86UQ8 179 aa12.46□□□□□ -0.42
SCARB2-210ENST00000638567 IGLV4-3A0A075B6K6 122 aa12.45□□□□□ -0.42
SCARB2-210ENST00000638567 GYPEP15421 78 aa12.45□□□□□ -0.42
SCARB2-210ENST00000638567 PRUNE2Q8WUY3 3088 aa12.45□□□□□ -0.42
SCARB2-210ENST00000638567 HHLA3Q9XRX5 114 aa12.45□□□□□ -0.42
SCARB2-210ENST00000638567 PKD1L2Q7Z442 2459 aa12.45□□□□□ -0.42
SCARB2-210ENST00000638567 IGLV10-54A0A075B6I4 117 aa12.45□□□□□ -0.42
SCARB2-210ENST00000638567 H3BT86 120 aa12.45□□□□□ -0.42
SCARB2-210ENST00000638567 C16orf74Q96GX8 76 aa12.45□□□□□ -0.42
SCARB2-210ENST00000638567 ODF3Q96PU9 254 aa12.45□□□□□ -0.42
SCARB2-210ENST00000638567 MAP6D1Q9H9H5 199 aa12.45□□□□□ -0.42
SCARB2-210ENST00000638567 COX7B2Q8TF08 81 aa12.44□□□□□ -0.42
SCARB2-210ENST00000638567 FN1P02751 2386 aaKnown RBP12.44□□□□□ -0.42
SCARB2-210ENST00000638567 CDKN2A-AS1Q9UH64 79 aa12.44□□□□□ -0.42
SCARB2-210ENST00000638567 A0A096LNJ9 63 aa12.44□□□□□ -0.42
SCARB2-210ENST00000638567 F8W735 103 aaPredicted RBP12.43□□□□□ -0.42
SCARB2-210ENST00000638567 MIAQ16674 131 aa12.43□□□□□ -0.42
SCARB2-210ENST00000638567 ACYP1P07311 99 aa12.43□□□□□ -0.42
SCARB2-210ENST00000638567 TRBV27A0A0K0K1C4 114 aa12.43□□□□□ -0.42
SCARB2-210ENST00000638567 MT-ATP8P03928 68 aa12.43□□□□□ -0.42
SCARB2-210ENST00000638567 HIST2H2BCQ6DN03 193 aa12.43□□□□□ -0.42
SCARB2-210ENST00000638567 Q6ZS46 218 aa12.43□□□□□ -0.42
SCARB2-210ENST00000638567 POLQO75417 2590 aa12.43□□□□□ -0.42
SCARB2-210ENST00000638567 TRAV26-1A0A087WT03 109 aa12.42□□□□□ -0.42
SCARB2-210ENST00000638567 A0A0B4J2C4 111 aa12.42□□□□□ -0.42
SCARB2-210ENST00000638567 ESM1Q9NQ30 184 aa12.42□□□□□ -0.42
SCARB2-210ENST00000638567 IGHV4-4A0A075B6R2 117 aa12.42□□□□□ -0.42
SCARB2-210ENST00000638567 PROK1P58294 105 aa12.42□□□□□ -0.42
SCARB2-210ENST00000638567 MIR7-3HGQ8N6C7 128 aa12.42□□□□□ -0.42
SCARB2-210ENST00000638567 LINC00467Q9BRT7 94 aa12.42□□□□□ -0.42
SCARB2-210ENST00000638567 TMEM223A0PJW6 202 aa12.42□□□□□ -0.42
SCARB2-210ENST00000638567 MTORP42345 2549 aa12.41□□□□□ -0.42
SCARB2-210ENST00000638567 APOC4P55056 127 aa12.41□□□□□ -0.42
SCARB2-210ENST00000638567 ORMDL1Q9P0S3 153 aa12.41□□□□□ -0.42
SCARB2-210ENST00000638567 RPL32P62910 135 aaKnown RBP12.41□□□□□ -0.42
SCARB2-210ENST00000638567 MRGPRG-AS1Q2M3A8 158 aa12.41□□□□□ -0.42
SCARB2-210ENST00000638567 H0YGX0 51 aa12.4□□□□□ -0.42
SCARB2-210ENST00000638567 Q6ZTI0 123 aa12.4□□□□□ -0.42
SCARB2-210ENST00000638567 POLR2KP53803 58 aaKnown RBP12.4□□□□□ -0.42
SCARB2-210ENST00000638567 C4orf3Q8WVX3 66 aa12.4□□□□□ -0.42
SCARB2-210ENST00000638567 TEX49A0A1B0GTD5 131 aa12.4□□□□□ -0.43
SCARB2-210ENST00000638567 FAM236AA0A1B0GUQ0 79 aa12.4□□□□□ -0.43
SCARB2-210ENST00000638567 FAM236BA0A1B0GV22 79 aa12.4□□□□□ -0.43
SCARB2-210ENST00000638567 PRRC2AP48634 2157 aaKnown RBP12.39□□□□□ -0.43
SCARB2-210ENST00000638567 TRAV25A0A0B4J276 109 aa12.39□□□□□ -0.43
SCARB2-210ENST00000638567 TRBV10-1A0A0K0K1A3 114 aa12.39□□□□□ -0.43
SCARB2-210ENST00000638567 CITED2Q99967 270 aaPredicted RBP12.39□□□□□ -0.43
SCARB2-210ENST00000638567 KLLNB2CW77 178 aa12.39□□□□□ -0.43
SCARB2-210ENST00000638567 IGHV3-33P01772 117 aa12.39□□□□□ -0.43
SCARB2-210ENST00000638567 SPANXDQ9BXN6 97 aa12.39□□□□□ -0.43
SCARB2-210ENST00000638567 TRBV6-5A0A0K0K1A5 114 aa12.38□□□□□ -0.43
SCARB2-210ENST00000638567 LECT2O14960 151 aa12.38□□□□□ -0.43
SCARB2-210ENST00000638567 TMEM263Q8WUH6 116 aaKnown RBP12.38□□□□□ -0.43
SCARB2-210ENST00000638567 DSCR8Q96T75 97 aa12.37□□□□□ -0.43
SCARB2-210ENST00000638567 IGKV3D-7A0A0C4DH55 119 aa12.37□□□□□ -0.43
SCARB2-210ENST00000638567 ZMAT4Q9H898 229 aa12.37□□□□□ -0.43
SCARB2-210ENST00000638567 A8MZ25 164 aa12.37□□□□□ -0.43
SCARB2-210ENST00000638567 Q9HAA7 133 aa12.36□□□□□ -0.43
SCARB2-210ENST00000638567 IGHV3-30P01768 117 aa12.36□□□□□ -0.43
SCARB2-210ENST00000638567 IGHV3-30-5P0DP03 117 aa12.36□□□□□ -0.43
SCARB2-210ENST00000638567 UFSP1Q6NVU6 142 aa12.36□□□□□ -0.43
SCARB2-210ENST00000638567 INSL3P51460 131 aa12.36□□□□□ -0.43
SCARB2-210ENST00000638567 TRIAP1O43715 76 aa12.36□□□□□ -0.43
SCARB2-210ENST00000638567 CRYGDP07320 174 aa12.36□□□□□ -0.43
SCARB2-210ENST00000638567 PSMB8P28062 276 aa12.36□□□□□ -0.43
SCARB2-210ENST00000638567 C3orf56Q8N813 242 aa12.36□□□□□ -0.43
SCARB2-210ENST00000638567 ADAMTS20P59510 1910 aa12.36□□□□□ -0.43
SCARB2-210ENST00000638567 COX7A2LO14548 114 aa12.35□□□□□ -0.43
SCARB2-210ENST00000638567 PRM2P04554 102 aa12.35□□□□□ -0.43
SCARB2-210ENST00000638567 TSHBP01222 138 aa12.35□□□□□ -0.43
SCARB2-210ENST00000638567 DEFB121Q5J5C9 76 aa12.35□□□□□ -0.43
SCARB2-210ENST00000638567 SMIM20Q8N5G0 67 aa12.35□□□□□ -0.43
SCARB2-210ENST00000638567 DEFB114Q30KQ6 69 aa12.34□□□□□ -0.43
SCARB2-210ENST00000638567 COX8CQ7Z4L0 72 aa12.34□□□□□ -0.43
SCARB2-210ENST00000638567 RNF183Q96D59 192 aa12.34□□□□□ -0.43
SCARB2-210ENST00000638567 HIST2H2BDQ6DRA6 164 aa12.34□□□□□ -0.43
SCARB2-210ENST00000638567 NKAPP1Q8N9T2 125 aa12.34□□□□□ -0.43
SCARB2-210ENST00000638567 DCANP1Q8TF63 244 aa12.34□□□□□ -0.43
SCARB2-210ENST00000638567 TMEM126AQ9H061 195 aa12.34□□□□□ -0.43
SCARB2-210ENST00000638567 EPG5Q9HCE0 2579 aa12.34□□□□□ -0.43
SCARB2-210ENST00000638567 A0A1W2PPR1 153 aa12.33□□□□□ -0.44
SCARB2-210ENST00000638567 DEFB4AO15263 64 aa12.33□□□□□ -0.44
SCARB2-210ENST00000638567 TRACP01848 142 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms