RNA–Protein interactions for RNA: ENST00000637540.1

SCN8A-213, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 93 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-213ENST00000637540 KIR2DL5BQ8NHK3 375 aa3.41□□□□□ -1.86
SCN8A-213ENST00000637540 DEFB104AQ8WTQ1 72 aa3.41□□□□□ -1.86
SCN8A-213ENST00000637540 TMEM141Q96I45 108 aa3.41□□□□□ -1.86
SCN8A-213ENST00000637540 AMELXQ99217 191 aa3.41□□□□□ -1.86
SCN8A-213ENST00000637540 C1QTNF4Q9BXJ3 329 aa3.41□□□□□ -1.86
SCN8A-213ENST00000637540 CST9LQ9H4G1 147 aa3.41□□□□□ -1.86
SCN8A-213ENST00000637540 TP53TG1Q9Y2A0 90 aa3.41□□□□□ -1.86
SCN8A-213ENST00000637540 IGHV3OR16-12A0A075B7B8 117 aa3.4□□□□□ -1.87
SCN8A-213ENST00000637540 TRGV1A0A0A0MS02 117 aa3.4□□□□□ -1.87
SCN8A-213ENST00000637540 TRBV10-1A0A0K0K1A3 114 aa3.4□□□□□ -1.87
SCN8A-213ENST00000637540 A0A1B0GV90 55 aa3.4□□□□□ -1.87
SCN8A-213ENST00000637540 C11orf86A6NJI1 115 aa3.4□□□□□ -1.87
SCN8A-213ENST00000637540 CIDEAO60543 219 aa3.4□□□□□ -1.87
SCN8A-213ENST00000637540 NPSP0C0P6 89 aa3.4□□□□□ -1.87
SCN8A-213ENST00000637540 HNRNPA3P51991 378 aaKnown RBP3.4□□□□□ -1.87
SCN8A-213ENST00000637540 CRYBA4P53673 196 aa3.4□□□□□ -1.87
SCN8A-213ENST00000637540 UBE2D3P61077 147 aa3.4□□□□□ -1.87
SCN8A-213ENST00000637540 UBE2D2P62837 147 aa3.4□□□□□ -1.87
SCN8A-213ENST00000637540 PMVKQ15126 192 aa3.4□□□□□ -1.87
SCN8A-213ENST00000637540 RRN3P1Q2M238 152 aa3.4□□□□□ -1.87
SCN8A-213ENST00000637540 BVES-AS1Q5T3Y7 98 aa3.4□□□□□ -1.87
SCN8A-213ENST00000637540 ZNRF2Q8NHG8 242 aa3.4□□□□□ -1.87
SCN8A-213ENST00000637540 C16orf74Q96GX8 76 aa3.4□□□□□ -1.87
SCN8A-213ENST00000637540 KIR2DL4Q99706 377 aa3.4□□□□□ -1.87
SCN8A-213ENST00000637540 OPRPNQ99935 248 aaPredicted RBP3.4□□□□□ -1.87
SCN8A-213ENST00000637540 TIMM21Q9BVV7 248 aa3.4□□□□□ -1.87
SCN8A-213ENST00000637540 TTTY13Q9BZ97 58 aa3.4□□□□□ -1.87
SCN8A-213ENST00000637540 NOP10Q9NPE3 64 aaKnown RBP3.4□□□□□ -1.87
SCN8A-213ENST00000637540 HIGD1BQ9P298 99 aa3.4□□□□□ -1.87
SCN8A-213ENST00000637540 CHTOPQ9Y3Y2 248 aaKnown RBP3.4□□□□□ -1.87
SCN8A-213ENST00000637540 TRBV7-3A0A075B6L6 115 aa3.39□□□□□ -1.87
SCN8A-213ENST00000637540 TRBV6-4A0A1B0GX49 114 aa3.39□□□□□ -1.87
SCN8A-213ENST00000637540 SMIM9A6NGZ8 99 aa3.39□□□□□ -1.87
SCN8A-213ENST00000637540 HSBP1L1C9JCN9 74 aa3.39□□□□□ -1.87
SCN8A-213ENST00000637540 E9PLD3 99 aa3.39□□□□□ -1.87
SCN8A-213ENST00000637540 K7EQD1 137 aa3.39□□□□□ -1.87
SCN8A-213ENST00000637540 PLNP26678 52 aa3.39□□□□□ -1.87
SCN8A-213ENST00000637540 KRTAP10-11P60412 298 aa3.39□□□□□ -1.87
SCN8A-213ENST00000637540 EGFEM1PQ0D2K5 195 aa3.39□□□□□ -1.87
SCN8A-213ENST00000637540 MPV17L2Q567V2 206 aa3.39□□□□□ -1.87
SCN8A-213ENST00000637540 FAM19A3Q7Z5A8 133 aa3.39□□□□□ -1.87
SCN8A-213ENST00000637540 GTSCR1Q86UQ5 136 aa3.39□□□□□ -1.87
SCN8A-213ENST00000637540 SLC25A29Q8N8R3 303 aa3.39□□□□□ -1.87
SCN8A-213ENST00000637540 OR4C5Q8NGB2 326 aa3.39□□□□□ -1.87
SCN8A-213ENST00000637540 TMEM208Q9BTX3 173 aa3.39□□□□□ -1.87
SCN8A-213ENST00000637540 UBE2D4Q9Y2X8 147 aa3.39□□□□□ -1.87
SCN8A-213ENST00000637540 TRBV25-1A0A075B6N4 114 aa3.38□□□□□ -1.87
SCN8A-213ENST00000637540 LOC100131303A0A0U1RQF7 123 aa3.38□□□□□ -1.87
SCN8A-213ENST00000637540 GAGE12BA1L429 117 aa3.38□□□□□ -1.87
SCN8A-213ENST00000637540 A8MZ25 164 aa3.38□□□□□ -1.87
SCN8A-213ENST00000637540 GAGE7O76087 117 aa3.38□□□□□ -1.87
SCN8A-213ENST00000637540 GAGE12FP0CL80 117 aa3.38□□□□□ -1.87
SCN8A-213ENST00000637540 GAGE12GP0CL81 117 aa3.38□□□□□ -1.87
SCN8A-213ENST00000637540 GAGE12IP0CL82 117 aa3.38□□□□□ -1.87
SCN8A-213ENST00000637540 HINT1P49773 126 aaPredicted RBP3.38□□□□□ -1.87
SCN8A-213ENST00000637540 MRPS36P82909 103 aaKnown RBP3.38□□□□□ -1.87
SCN8A-213ENST00000637540 Q8NAQ8 132 aa3.38□□□□□ -1.87
SCN8A-213ENST00000637540 CSDC2Q9Y534 153 aaKnown RBP3.38□□□□□ -1.87
SCN8A-213ENST00000637540 TNFRSF18Q9Y5U5 241 aa3.38□□□□□ -1.87
SCN8A-213ENST00000637540 HUWE1Q7Z6Z7 4374 aaKnown RBP3.38□□□□□ -1.87
SCN8A-213ENST00000637540 IGHV3-38A0A0C4DH36 116 aa3.37□□□□□ -1.87
SCN8A-213ENST00000637540 A0A0J9YXV3 536 aa3.37□□□□□ -1.87
SCN8A-213ENST00000637540 TMEM223A0PJW6 202 aa3.37□□□□□ -1.87
SCN8A-213ENST00000637540 TAX1BP3O14907 124 aa3.37□□□□□ -1.87
SCN8A-213ENST00000637540 ZNF22P17026 224 aaPredicted RBP3.37□□□□□ -1.87
SCN8A-213ENST00000637540 TSPEAR-AS2P59090 65 aa3.37□□□□□ -1.87
SCN8A-213ENST00000637540 TMEM97Q5BJF2 176 aa3.37□□□□□ -1.87
SCN8A-213ENST00000637540 PAPPA-AS1Q5QFB9 102 aa3.37□□□□□ -1.87
SCN8A-213ENST00000637540 COL5A1-AS1Q5SY13 56 aa3.37□□□□□ -1.87
SCN8A-213ENST00000637540 CEMP1Q6PRD7 247 aaPredicted RBP3.37□□□□□ -1.87
SCN8A-213ENST00000637540 C12orf54Q6X4T0 127 aa3.37□□□□□ -1.87
SCN8A-213ENST00000637540 Q6ZUT4 128 aa3.37□□□□□ -1.87
SCN8A-213ENST00000637540 PHLDA1Q8WV24 401 aaPredicted RBP3.37□□□□□ -1.87
SCN8A-213ENST00000637540 RNF183Q96D59 192 aa3.37□□□□□ -1.87
SCN8A-213ENST00000637540 TM2D2Q9BX73 214 aa3.37□□□□□ -1.87
SCN8A-213ENST00000637540 GTSF1LQ9H1H1 148 aa3.37□□□□□ -1.87
SCN8A-213ENST00000637540 SPANXA1Q9NS26 97 aa3.37□□□□□ -1.87
SCN8A-213ENST00000637540 MGAM2Q2M2H8 2515 aa3.37□□□□□ -1.87
SCN8A-213ENST00000637540 DNAH9Q9NYC9 4486 aa3.36□□□□□ -1.87
SCN8A-213ENST00000637540 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.36□□□□□ -1.87
SCN8A-213ENST00000637540 IGLV5-45A0A087WSX0 123 aa3.36□□□□□ -1.87
SCN8A-213ENST00000637540 IGHV4-28A0A0C4DH34 117 aa3.36□□□□□ -1.87
SCN8A-213ENST00000637540 IGKV2-29A2NJV5 120 aaPredicted RBP3.36□□□□□ -1.87
SCN8A-213ENST00000637540 GAGE12JA6NER3 117 aa3.36□□□□□ -1.87
SCN8A-213ENST00000637540 LYRM9A8MSI8 78 aa3.36□□□□□ -1.87
SCN8A-213ENST00000637540 K7EP13 123 aa3.36□□□□□ -1.87
SCN8A-213ENST00000637540 IGHV4-30-4P0DP06 118 aa3.36□□□□□ -1.87
SCN8A-213ENST00000637540 NMUP48645 174 aa3.36□□□□□ -1.87
SCN8A-213ENST00000637540 UBE2D1P51668 147 aa3.36□□□□□ -1.87
SCN8A-213ENST00000637540 EMP1P54849 157 aa3.36□□□□□ -1.87
SCN8A-213ENST00000637540 TCTAP57738 103 aa3.36□□□□□ -1.87
SCN8A-213ENST00000637540 TIRAPP58753 221 aa3.36□□□□□ -1.87
SCN8A-213ENST00000637540 RPL36AP83881 106 aaKnown RBP3.36□□□□□ -1.87
SCN8A-213ENST00000637540 HSD52Q0P140 79 aa3.36□□□□□ -1.87
SCN8A-213ENST00000637540 GAGE1Q13065 139 aa3.36□□□□□ -1.87
SCN8A-213ENST00000637540 GAGE4Q13068 117 aa3.36□□□□□ -1.87
SCN8A-213ENST00000637540 GAGE5Q13069 117 aa3.36□□□□□ -1.87
SCN8A-213ENST00000637540 COTL1Q14019 142 aa3.36□□□□□ -1.87
SCN8A-213ENST00000637540 GAGE13Q4V321 117 aa3.36□□□□□ -1.87
SCN8A-213ENST00000637540 OXLD1Q5BKU9 147 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms