RNA–Protein interactions for RNA: ENST00000636768.1

CACNA1A-230, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,034 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-230ENST00000636768 DEFB104AQ8WTQ1 72 aa9.79□□□□□ -0.84
CACNA1A-230ENST00000636768 PGLYRP4Q96LB8 373 aa9.79□□□□□ -0.84
CACNA1A-230ENST00000636768 GATCO43716 136 aaKnown RBP9.78□□□□□ -0.84
CACNA1A-230ENST00000636768 AMTP48728 403 aa9.78□□□□□ -0.84
CACNA1A-230ENST00000636768 REG3AQ06141 175 aa9.78□□□□□ -0.84
CACNA1A-230ENST00000636768 COTL1Q14019 142 aa9.78□□□□□ -0.84
CACNA1A-230ENST00000636768 UQCC3Q6UW78 93 aa9.78□□□□□ -0.84
CACNA1A-230ENST00000636768 IGLV10-54A0A075B6I4 117 aa9.77□□□□□ -0.85
CACNA1A-230ENST00000636768 TRAV26-2A0A0B4J265 109 aa9.77□□□□□ -0.85
CACNA1A-230ENST00000636768 GTSF1Q8WW33 167 aa9.77□□□□□ -0.85
CACNA1A-230ENST00000636768 CHAC1Q9BUX1 264 aa9.77□□□□□ -0.85
CACNA1A-230ENST00000636768 SRRM2Q9UQ35 2752 aaKnown RBP9.76□□□□□ -0.85
CACNA1A-230ENST00000636768 PRSS1P07477 247 aa9.76□□□□□ -0.85
CACNA1A-230ENST00000636768 GATD1Q8NB37 220 aa9.76□□□□□ -0.85
CACNA1A-230ENST00000636768 C20orf203Q8NBC4 194 aa9.76□□□□□ -0.85
CACNA1A-230ENST00000636768 LYPD6BQ8NI32 183 aa9.76□□□□□ -0.85
CACNA1A-230ENST00000636768 EIF5A2Q9GZV4 153 aaKnown RBP9.76□□□□□ -0.85
CACNA1A-230ENST00000636768 DMBT1Q9UGM3 2413 aaPredicted RBP9.76□□□□□ -0.85
CACNA1A-230ENST00000636768 VPS13BQ7Z7G8 4022 aa9.75□□□□□ -0.85
CACNA1A-230ENST00000636768 IGLV4-60A0A075B6I1 120 aa9.75□□□□□ -0.85
CACNA1A-230ENST00000636768 A0A1B0GUV1 79 aa9.75□□□□□ -0.85
CACNA1A-230ENST00000636768 A8MWL6 223 aa9.75□□□□□ -0.85
CACNA1A-230ENST00000636768 KRTAP26-1Q6PEX3 210 aa9.75□□□□□ -0.85
CACNA1A-230ENST00000636768 FAM231DQ6ZW35 169 aa9.75□□□□□ -0.85
CACNA1A-230ENST00000636768 TRAV8-4A0A0B4J246 113 aa9.74□□□□□ -0.85
CACNA1A-230ENST00000636768 CIRBP-AS1Q8TBR5 109 aa9.74□□□□□ -0.85
CACNA1A-230ENST00000636768 BORCS7Q96B45 105 aa9.74□□□□□ -0.85
CACNA1A-230ENST00000636768 RPL39LQ96EH5 51 aaKnown RBP9.74□□□□□ -0.85
CACNA1A-230ENST00000636768 SMIM7Q9BQ49 75 aa9.74□□□□□ -0.85
CACNA1A-230ENST00000636768 GFRA4Q9GZZ7 299 aa9.74□□□□□ -0.85
CACNA1A-230ENST00000636768 FLG2Q5D862 2391 aaPredicted RBP9.74□□□□□ -0.85
CACNA1A-230ENST00000636768 FOXA3P55318 350 aaPredicted RBP9.73□□□□□ -0.85
CACNA1A-230ENST00000636768 CT83Q5H943 113 aa9.73□□□□□ -0.85
CACNA1A-230ENST00000636768 DGAT2L7PQ6IED9 249 aa9.73□□□□□ -0.85
CACNA1A-230ENST00000636768 TMA7Q9Y2S6 64 aaKnown RBP9.73□□□□□ -0.85
CACNA1A-230ENST00000636768 CLRN3Q8NCR9 226 aa9.72□□□□□ -0.85
CACNA1A-230ENST00000636768 MYCBP2O75592 4640 aa9.71□□□□□ -0.85
CACNA1A-230ENST00000636768 hDV102S1A0JD36 115 aa9.71□□□□□ -0.86
CACNA1A-230ENST00000636768 AMMECR1LQ6DCA0 310 aa9.71□□□□□ -0.86
CACNA1A-230ENST00000636768 LINC01551Q86U37 167 aa9.71□□□□□ -0.86
CACNA1A-230ENST00000636768 IGKV3OR2-268A0A0C4DH90 116 aa9.7□□□□□ -0.86
CACNA1A-230ENST00000636768 SDHAF1A6NFY7 115 aa9.7□□□□□ -0.86
CACNA1A-230ENST00000636768 ZNF727A8MUV8 499 aa9.7□□□□□ -0.86
CACNA1A-230ENST00000636768 J3QL48 77 aa9.7□□□□□ -0.86
CACNA1A-230ENST00000636768 NCR2O95944 276 aa9.7□□□□□ -0.86
CACNA1A-230ENST00000636768 APCSP02743 223 aa9.7□□□□□ -0.86
CACNA1A-230ENST00000636768 RNASEKQ6P5S7 137 aaKnown RBP9.7□□□□□ -0.86
CACNA1A-230ENST00000636768 C9orf163Q8N9P6 203 aa9.7□□□□□ -0.86
CACNA1A-230ENST00000636768 TSKUQ8WUA8 353 aa9.7□□□□□ -0.86
CACNA1A-230ENST00000636768 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.69□□□□□ -0.86
CACNA1A-230ENST00000636768 A0A1B0GUT8 65 aa9.69□□□□□ -0.86
CACNA1A-230ENST00000636768 IGKV2-29A2NJV5 120 aaPredicted RBP9.69□□□□□ -0.86
CACNA1A-230ENST00000636768 HIGD1CA8MV81 97 aa9.69□□□□□ -0.86
CACNA1A-230ENST00000636768 NDUFS6O75380 124 aaKnown RBP9.69□□□□□ -0.86
CACNA1A-230ENST00000636768 SCO1O75880 301 aa9.69□□□□□ -0.86
CACNA1A-230ENST00000636768 DNAH8Q96JB1 4490 aa9.69□□□□□ -0.86
CACNA1A-230ENST00000636768 AP5S1Q9NUS5 200 aa9.69□□□□□ -0.86
CACNA1A-230ENST00000636768 HERC1Q15751 4861 aa9.68□□□□□ -0.86
CACNA1A-230ENST00000636768 TMEM218A2RU14 115 aa9.68□□□□□ -0.86
CACNA1A-230ENST00000636768 APOC3P02656 99 aa9.68□□□□□ -0.86
CACNA1A-230ENST00000636768 SRP19P09132 144 aaKnown RBP9.68□□□□□ -0.86
CACNA1A-230ENST00000636768 PMCHP20382 165 aa9.68□□□□□ -0.86
CACNA1A-230ENST00000636768 OSTCQ9NRP0 149 aa9.68□□□□□ -0.86
CACNA1A-230ENST00000636768 GAGE12HA6NDE8 117 aa9.67□□□□□ -0.86
CACNA1A-230ENST00000636768 H7C423 109 aa9.67□□□□□ -0.86
CACNA1A-230ENST00000636768 I3L3M4 83 aa9.67□□□□□ -0.86
CACNA1A-230ENST00000636768 CNBPP62633 177 aaKnown RBP9.67□□□□□ -0.86
CACNA1A-230ENST00000636768 ST20Q9HBF5 79 aa9.67□□□□□ -0.86
CACNA1A-230ENST00000636768 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.66□□□□□ -0.86
CACNA1A-230ENST00000636768 TRBV6-5A0A0K0K1A5 114 aa9.66□□□□□ -0.86
CACNA1A-230ENST00000636768 FAM231BA6NCW3 169 aa9.66□□□□□ -0.86
CACNA1A-230ENST00000636768 FGF6P10767 208 aa9.66□□□□□ -0.86
CACNA1A-230ENST00000636768 SVBPQ8N300 66 aa9.66□□□□□ -0.86
CACNA1A-230ENST00000636768 TMEM191AQ9H0A3 160 aa9.66□□□□□ -0.86
CACNA1A-230ENST00000636768 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.66□□□□□ -0.86
CACNA1A-230ENST00000636768 CFAP161Q6P656 301 aa9.65□□□□□ -0.86
CACNA1A-230ENST00000636768 SDIM1Q6ZPB5 146 aa9.65□□□□□ -0.86
CACNA1A-230ENST00000636768 TMEM101Q96IK0 257 aa9.65□□□□□ -0.86
CACNA1A-230ENST00000636768 BTF3L4Q96K17 158 aa9.65□□□□□ -0.86
CACNA1A-230ENST00000636768 TMEM242Q9NWH2 141 aa9.65□□□□□ -0.86
CACNA1A-230ENST00000636768 IGHV3-64A0A075B6Q5 118 aa9.64□□□□□ -0.87
CACNA1A-230ENST00000636768 GAS8-AS1O95177 125 aa9.64□□□□□ -0.87
CACNA1A-230ENST00000636768 ZNF25P17030 456 aaPredicted RBP9.64□□□□□ -0.87
CACNA1A-230ENST00000636768 RPL37AP61513 92 aaKnown RBP9.64□□□□□ -0.87
CACNA1A-230ENST00000636768 TMEM241Q24JQ0 296 aa9.64□□□□□ -0.87
CACNA1A-230ENST00000636768 C10orf91Q5T1B1 145 aa9.64□□□□□ -0.87
CACNA1A-230ENST00000636768 CHCHD10Q8WYQ3 142 aaPredicted RBP9.64□□□□□ -0.87
CACNA1A-230ENST00000636768 MRAP2Q96G30 205 aa9.64□□□□□ -0.87
CACNA1A-230ENST00000636768 SEC11CQ9BY50 192 aa9.64□□□□□ -0.87
CACNA1A-230ENST00000636768 CARHSP1Q9Y2V2 147 aaKnown RBP9.64□□□□□ -0.87
CACNA1A-230ENST00000636768 V9GYV3 84 aa9.64□□□□□ -0.87
CACNA1A-230ENST00000636768 F8W036 122 aa9.63□□□□□ -0.87
CACNA1A-230ENST00000636768 TSHBP01222 138 aa9.63□□□□□ -0.87
CACNA1A-230ENST00000636768 RAB4AP20338 218 aa9.63□□□□□ -0.87
CACNA1A-230ENST00000636768 KRTAP10-4P60372 401 aaPredicted RBP9.63□□□□□ -0.87
CACNA1A-230ENST00000636768 RIGQ13278 110 aa9.63□□□□□ -0.87
CACNA1A-230ENST00000636768 FAM74A3Q4VXF1 159 aa9.63□□□□□ -0.87
CACNA1A-230ENST00000636768 AMN1Q8IY45 258 aa9.63□□□□□ -0.87
CACNA1A-230ENST00000636768 C15orf56Q8N910 161 aa9.63□□□□□ -0.87
CACNA1A-230ENST00000636768 ISOC2Q96AB3 205 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms