RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-215ENST00000636674 LINC01600Q96MT4 127 aa10.66□□□□□ -0.7
CLN6-215ENST00000636674 ANKRD17O75179 2603 aaKnown RBP10.66□□□□□ -0.7
CLN6-215ENST00000636674 A0A0J9YXY3 114 aa10.65□□□□□ -0.7
CLN6-215ENST00000636674 HOXD3P31249 432 aaPredicted RBP10.65□□□□□ -0.7
CLN6-215ENST00000636674 LINC01356Q8N9X3 169 aa10.65□□□□□ -0.7
CLN6-215ENST00000636674 VPS13CQ709C8 3753 aa10.65□□□□□ -0.7
CLN6-215ENST00000636674 TRAV2A0A0B4J234 112 aa10.65□□□□□ -0.71
CLN6-215ENST00000636674 SCGB1C2P0DMR2 95 aa10.65□□□□□ -0.71
CLN6-215ENST00000636674 MUSTN1Q8IVN3 82 aa10.65□□□□□ -0.71
CLN6-215ENST00000636674 ERG28Q9UKR5 140 aa10.65□□□□□ -0.71
CLN6-215ENST00000636674 POLQO75417 2590 aa10.65□□□□□ -0.71
CLN6-215ENST00000636674 SPG11Q96JI7 2443 aa10.64□□□□□ -0.71
CLN6-215ENST00000636674 IGHV3-30-3P0DP02 117 aa10.64□□□□□ -0.71
CLN6-215ENST00000636674 CD28P10747 220 aa10.64□□□□□ -0.71
CLN6-215ENST00000636674 KRTAP10-9P60411 292 aa10.64□□□□□ -0.71
CLN6-215ENST00000636674 ANKRD29Q8N6D5 301 aa10.64□□□□□ -0.71
CLN6-215ENST00000636674 LITAFQ99732 161 aa10.64□□□□□ -0.71
CLN6-215ENST00000636674 VPREB3Q9UKI3 123 aa10.64□□□□□ -0.71
CLN6-215ENST00000636674 PDZD2O15018 2839 aa10.64□□□□□ -0.71
CLN6-215ENST00000636674 A0A096LNT2 108 aa10.63□□□□□ -0.71
CLN6-215ENST00000636674 Q6ZUT4 128 aa10.63□□□□□ -0.71
CLN6-215ENST00000636674 TIMM21Q9BVV7 248 aa10.63□□□□□ -0.71
CLN6-215ENST00000636674 CREBBPQ92793 2442 aa10.63□□□□□ -0.71
CLN6-215ENST00000636674 SLC25A20O43772 301 aa10.63□□□□□ -0.71
CLN6-215ENST00000636674 NACAE9PAV3 2078 aa10.62□□□□□ -0.71
CLN6-215ENST00000636674 IGHV3-64A0A075B6Q5 118 aa10.62□□□□□ -0.71
CLN6-215ENST00000636674 IGHV1-58A0A0C4DH39 117 aa10.62□□□□□ -0.71
CLN6-215ENST00000636674 SPANXDQ9BXN6 97 aa10.62□□□□□ -0.71
CLN6-215ENST00000636674 ZNF702PQ9H963 129 aa10.62□□□□□ -0.71
CLN6-215ENST00000636674 SPANXA1Q9NS26 97 aa10.62□□□□□ -0.71
CLN6-215ENST00000636674 SPANXCQ9NY87 97 aa10.62□□□□□ -0.71
CLN6-215ENST00000636674 TINCRA0A1B0GVN0 87 aa10.62□□□□□ -0.71
CLN6-215ENST00000636674 FSHBP01225 129 aa10.62□□□□□ -0.71
CLN6-215ENST00000636674 RAX2Q96IS3 184 aa10.62□□□□□ -0.71
CLN6-215ENST00000636674 TRBV30A0A0K0K1B3 111 aa10.61□□□□□ -0.71
CLN6-215ENST00000636674 H3BMM0 161 aa10.61□□□□□ -0.71
CLN6-215ENST00000636674 XGP55808 180 aa10.61□□□□□ -0.71
CLN6-215ENST00000636674 LINC00467Q9BRT7 94 aa10.61□□□□□ -0.71
CLN6-215ENST00000636674 TNFRSF18Q9Y5U5 241 aa10.61□□□□□ -0.71
CLN6-215ENST00000636674 TMEM262E9PQX1 116 aa10.6□□□□□ -0.71
CLN6-215ENST00000636674 SPINK8P0C7L1 97 aa10.6□□□□□ -0.71
CLN6-215ENST00000636674 ZNF415Q09FC8 603 aa10.6□□□□□ -0.71
CLN6-215ENST00000636674 CHCHD7Q9BUK0 85 aa10.6□□□□□ -0.71
CLN6-215ENST00000636674 MYO9AB2RTY4 2548 aa10.6□□□□□ -0.71
CLN6-215ENST00000636674 RBMY1BA6NDE4 496 aaKnown RBP10.6□□□□□ -0.71
CLN6-215ENST00000636674 RBMY1EA6NEQ0 496 aaKnown RBP10.6□□□□□ -0.71
CLN6-215ENST00000636674 KNCNA6PVL3 124 aa10.6□□□□□ -0.71
CLN6-215ENST00000636674 C9JAW5 83 aa10.6□□□□□ -0.71
CLN6-215ENST00000636674 TGFAP01135 160 aa10.6□□□□□ -0.71
CLN6-215ENST00000636674 MT-ATP8P03928 68 aa10.6□□□□□ -0.71
CLN6-215ENST00000636674 RBMY1DP0C7P1 496 aaKnown RBP10.6□□□□□ -0.71
CLN6-215ENST00000636674 CKS1BP61024 79 aa10.6□□□□□ -0.71
CLN6-215ENST00000636674 ATXN8Q156A1 80 aa10.6□□□□□ -0.71
CLN6-215ENST00000636674 CSPG4Q6UVK1 2322 aa10.6□□□□□ -0.71
CLN6-215ENST00000636674 CCDC168Q8NDH2 2452 aa10.6□□□□□ -0.71
CLN6-215ENST00000636674 RNF183Q96D59 192 aa10.6□□□□□ -0.71
CLN6-215ENST00000636674 DUX5Q96PT3 197 aa10.6□□□□□ -0.71
CLN6-215ENST00000636674 SPXQ9BT56 116 aa10.6□□□□□ -0.71
CLN6-215ENST00000636674 UBE2D4Q9Y2X8 147 aa10.6□□□□□ -0.71
CLN6-215ENST00000636674 CSMD2Q7Z408 3487 aa10.59□□□□□ -0.71
CLN6-215ENST00000636674 DEFB131AP59861 70 aa10.59□□□□□ -0.71
CLN6-215ENST00000636674 Q6YL49 198 aa10.59□□□□□ -0.71
CLN6-215ENST00000636674 VSIG2Q96IQ7 327 aa10.59□□□□□ -0.71
CLN6-215ENST00000636674 DNAJC30Q96LL9 226 aa10.59□□□□□ -0.71
CLN6-215ENST00000636674 PROK1P58294 105 aa10.58□□□□□ -0.72
CLN6-215ENST00000636674 MIAQ16674 131 aa10.58□□□□□ -0.72
CLN6-215ENST00000636674 LINC01620Q4KN68 170 aa10.58□□□□□ -0.72
CLN6-215ENST00000636674 DUX3Q96PT4 197 aa10.58□□□□□ -0.72
CLN6-215ENST00000636674 NDUFA12Q9UI09 145 aa10.58□□□□□ -0.72
CLN6-215ENST00000636674 PRRC2AP48634 2157 aaKnown RBP10.57□□□□□ -0.72
CLN6-215ENST00000636674 TRAV8-3A0A0A6YYJ7 113 aa10.57□□□□□ -0.72
CLN6-215ENST00000636674 IGHV3-73A0A0B4J1V6 119 aa10.57□□□□□ -0.72
CLN6-215ENST00000636674 TIMM17BO60830 172 aa10.57□□□□□ -0.72
CLN6-215ENST00000636674 IGHV3-53P01767 116 aa10.57□□□□□ -0.72
CLN6-215ENST00000636674 Q1RN00 199 aa10.57□□□□□ -0.72
CLN6-215ENST00000636674 BEAN1Q3B7T3 259 aa10.57□□□□□ -0.72
CLN6-215ENST00000636674 ZFAND6Q6FIF0 208 aa10.57□□□□□ -0.72
CLN6-215ENST00000636674 CEMP1Q6PRD7 247 aaPredicted RBP10.57□□□□□ -0.72
CLN6-215ENST00000636674 AKAP9Q99996 3911 aa10.56□□□□□ -0.72
CLN6-215ENST00000636674 TRIAP1O43715 76 aa10.56□□□□□ -0.72
CLN6-215ENST00000636674 RPL13AP40429 203 aaKnown RBP10.56□□□□□ -0.72
CLN6-215ENST00000636674 C11orf72Q8NBR9 251 aa10.56□□□□□ -0.72
CLN6-215ENST00000636674 NRGNQ92686 78 aa10.56□□□□□ -0.72
CLN6-215ENST00000636674 IGLV5-45A0A087WSX0 123 aa10.55□□□□□ -0.72
CLN6-215ENST00000636674 H7C2G1 150 aa10.55□□□□□ -0.72
CLN6-215ENST00000636674 SLURP1P55000 103 aa10.55□□□□□ -0.72
CLN6-215ENST00000636674 Q6ZSN1 163 aa10.55□□□□□ -0.72
CLN6-215ENST00000636674 Q8N2B8 174 aa10.55□□□□□ -0.72
CLN6-215ENST00000636674 TRBV10-2A0A0K0K1G8 114 aa10.55□□□□□ -0.72
CLN6-215ENST00000636674 ADARB2-AS1A8MUL3 147 aa10.55□□□□□ -0.72
CLN6-215ENST00000636674 ADAMTSL4-AS1Q5T5F5 129 aa10.55□□□□□ -0.72
CLN6-215ENST00000636674 PEMTQ9UBM1 199 aa10.55□□□□□ -0.72
CLN6-215ENST00000636674 SORL1Q92673 2214 aa10.54□□□□□ -0.72
CLN6-215ENST00000636674 HTN1P15515 57 aa10.54□□□□□ -0.72
CLN6-215ENST00000636674 TIRAPP58753 221 aa10.54□□□□□ -0.72
CLN6-215ENST00000636674 MAP6D1Q9H9H5 199 aa10.54□□□□□ -0.72
CLN6-215ENST00000636674 YAE1D1Q9NRH1 226 aa10.54□□□□□ -0.72
CLN6-215ENST00000636674 OTOGQ6ZRI0 2925 aa10.54□□□□□ -0.72
CLN6-215ENST00000636674 RS1O15537 224 aa10.53□□□□□ -0.72
CLN6-215ENST00000636674 IFITM1P13164 125 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 260.7 ms