RNA–Protein interactions for RNA: ENST00000635450.2

LINC00339-209, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 947 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-209ENST00000635450 DNAH8Q96JB1 4490 aa10.36□□□□□ -0.75
LINC00339-209ENST00000635450 IGKV2D-24A0A075B6R9 120 aa10.36□□□□□ -0.75
LINC00339-209ENST00000635450 LRCOL1A6NCL2 159 aa10.36□□□□□ -0.75
LINC00339-209ENST00000635450 UBE2L6O14933 153 aa10.36□□□□□ -0.75
LINC00339-209ENST00000635450 PNRC1Q12796 327 aaPredicted RBP10.36□□□□□ -0.75
LINC00339-209ENST00000635450 CDPF1Q6NVV7 123 aa10.36□□□□□ -0.75
LINC00339-209ENST00000635450 PPP1R2P9O14990 202 aa10.35□□□□□ -0.75
LINC00339-209ENST00000635450 AMTP48728 403 aa10.35□□□□□ -0.75
LINC00339-209ENST00000635450 MRAP2Q96G30 205 aa10.35□□□□□ -0.75
LINC00339-209ENST00000635450 A0A1B0GW15 77 aa10.34□□□□□ -0.75
LINC00339-209ENST00000635450 SDHAF1A6NFY7 115 aa10.34□□□□□ -0.75
LINC00339-209ENST00000635450 RAB4AP20338 218 aa10.34□□□□□ -0.75
LINC00339-209ENST00000635450 RBX1P62877 108 aa10.34□□□□□ -0.75
LINC00339-209ENST00000635450 WFDC2Q14508 124 aa10.34□□□□□ -0.75
LINC00339-209ENST00000635450 AMN1Q8IY45 258 aa10.34□□□□□ -0.75
LINC00339-209ENST00000635450 Q8N976 141 aa10.34□□□□□ -0.75
LINC00339-209ENST00000635450 DEFB104AQ8WTQ1 72 aa10.34□□□□□ -0.75
LINC00339-209ENST00000635450 VPS13BQ7Z7G8 4022 aa10.33□□□□□ -0.76
LINC00339-209ENST00000635450 NCR2O95944 276 aa10.33□□□□□ -0.76
LINC00339-209ENST00000635450 S100A8P05109 93 aa10.33□□□□□ -0.76
LINC00339-209ENST00000635450 PMCHP20382 165 aa10.33□□□□□ -0.76
LINC00339-209ENST00000635450 CAMPP49913 170 aa10.33□□□□□ -0.76
LINC00339-209ENST00000635450 UQCC3Q6UW78 93 aa10.33□□□□□ -0.76
LINC00339-209ENST00000635450 RNF185Q96GF1 192 aa10.33□□□□□ -0.76
LINC00339-209ENST00000635450 C1orf43Q9BWL3 253 aa10.33□□□□□ -0.76
LINC00339-209ENST00000635450 ST20Q9HBF5 79 aa10.33□□□□□ -0.76
LINC00339-209ENST00000635450 TRBV6-5A0A0K0K1A5 114 aa10.32□□□□□ -0.76
LINC00339-209ENST00000635450 PPP1R17O96001 155 aa10.32□□□□□ -0.76
LINC00339-209ENST00000635450 MT-ND4LP03901 98 aa10.32□□□□□ -0.76
LINC00339-209ENST00000635450 ANAPC16Q96DE5 110 aa10.32□□□□□ -0.76
LINC00339-209ENST00000635450 I3L3M4 83 aa10.31□□□□□ -0.76
LINC00339-209ENST00000635450 APCSP02743 223 aa10.31□□□□□ -0.76
LINC00339-209ENST00000635450 MIAQ16674 131 aa10.31□□□□□ -0.76
LINC00339-209ENST00000635450 FAM104BQ5XKR9 115 aa10.31□□□□□ -0.76
LINC00339-209ENST00000635450 MRPL54Q6P161 138 aaKnown RBP10.31□□□□□ -0.76
LINC00339-209ENST00000635450 ENHOQ6UWT2 76 aa10.31□□□□□ -0.76
LINC00339-209ENST00000635450 FLG2Q5D862 2391 aaPredicted RBP10.31□□□□□ -0.76
LINC00339-209ENST00000635450 A0A1B0GUV1 79 aa10.3□□□□□ -0.76
LINC00339-209ENST00000635450 EPM2AB3EWF7 344 aa10.3□□□□□ -0.76
LINC00339-209ENST00000635450 F8W036 122 aa10.3□□□□□ -0.76
LINC00339-209ENST00000635450 GCSHP23434 173 aa10.3□□□□□ -0.76
LINC00339-209ENST00000635450 HBBP68871 147 aa10.3□□□□□ -0.76
LINC00339-209ENST00000635450 Q5VSD8 79 aa10.3□□□□□ -0.76
LINC00339-209ENST00000635450 LINC00269Q8N2A0 174 aa10.3□□□□□ -0.76
LINC00339-209ENST00000635450 Q8N814 137 aa10.3□□□□□ -0.76
LINC00339-209ENST00000635450 NTN5Q8WTR8 489 aaPredicted RBP10.3□□□□□ -0.76
LINC00339-209ENST00000635450 MYCBP2O75592 4640 aa10.29□□□□□ -0.76
LINC00339-209ENST00000635450 IGLV5-52A0A0A0MRZ9 124 aa10.29□□□□□ -0.76
LINC00339-209ENST00000635450 GAS8-AS1O95177 125 aa10.29□□□□□ -0.76
LINC00339-209ENST00000635450 SMR3BP02814 79 aaPredicted RBP10.29□□□□□ -0.76
LINC00339-209ENST00000635450 RPS10P46783 165 aaKnown RBP10.29□□□□□ -0.76
LINC00339-209ENST00000635450 CLPSL2Q6UWE3 100 aa10.29□□□□□ -0.76
LINC00339-209ENST00000635450 BAALCQ8WXS3 180 aa10.29□□□□□ -0.76
LINC00339-209ENST00000635450 TMEM70Q9BUB7 260 aa10.29□□□□□ -0.76
LINC00339-209ENST00000635450 LINC00862A6NCI5 91 aa10.28□□□□□ -0.76
LINC00339-209ENST00000635450 SMKR1H3BMG3 65 aa10.28□□□□□ -0.76
LINC00339-209ENST00000635450 LECT2O14960 151 aa10.28□□□□□ -0.76
LINC00339-209ENST00000635450 REG3AQ06141 175 aa10.28□□□□□ -0.76
LINC00339-209ENST00000635450 MRPL51Q4U2R6 128 aaKnown RBP10.28□□□□□ -0.76
LINC00339-209ENST00000635450 AMMECR1LQ6DCA0 310 aa10.28□□□□□ -0.76
LINC00339-209ENST00000635450 ATP5L2Q7Z4Y8 100 aa10.28□□□□□ -0.76
LINC00339-209ENST00000635450 PRR34Q9NV39 138 aa10.28□□□□□ -0.76
LINC00339-209ENST00000635450 TMEM218A2RU14 115 aa10.27□□□□□ -0.77
LINC00339-209ENST00000635450 H7C423 109 aa10.27□□□□□ -0.77
LINC00339-209ENST00000635450 CKS2P33552 79 aa10.27□□□□□ -0.77
LINC00339-209ENST00000635450 POLR2KP53803 58 aaKnown RBP10.27□□□□□ -0.77
LINC00339-209ENST00000635450 COMMD7Q86VX2 200 aa10.27□□□□□ -0.77
LINC00339-209ENST00000635450 C20orf203Q8NBC4 194 aa10.27□□□□□ -0.77
LINC00339-209ENST00000635450 HERC1Q15751 4861 aa10.27□□□□□ -0.77
LINC00339-209ENST00000635450 SRRM2Q9UQ35 2752 aaKnown RBP10.26□□□□□ -0.77
LINC00339-209ENST00000635450 DMBT1Q9UGM3 2413 aaPredicted RBP10.26□□□□□ -0.77
LINC00339-209ENST00000635450 IGLV4-60A0A075B6I1 120 aa10.26□□□□□ -0.77
LINC00339-209ENST00000635450 TRBV27A0A0K0K1C4 114 aa10.26□□□□□ -0.77
LINC00339-209ENST00000635450 A0A1B0GXF2 115 aa10.26□□□□□ -0.77
LINC00339-209ENST00000635450 VCYO14598 125 aa10.26□□□□□ -0.77
LINC00339-209ENST00000635450 HLA-DQA1P01909 254 aa10.26□□□□□ -0.77
LINC00339-209ENST00000635450 SUMO2P61956 95 aaKnown RBP10.26□□□□□ -0.77
LINC00339-209ENST00000635450 RNASEKQ6P5S7 137 aaKnown RBP10.26□□□□□ -0.77
LINC00339-209ENST00000635450 TMEM242Q9NWH2 141 aa10.26□□□□□ -0.77
LINC00339-209ENST00000635450 FAM30AQ9NZY2 134 aa10.26□□□□□ -0.77
LINC00339-209ENST00000635450 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.25□□□□□ -0.77
LINC00339-209ENST00000635450 TRAV8-4A0A0B4J246 113 aa10.25□□□□□ -0.77
LINC00339-209ENST00000635450 IGKV2-29A2NJV5 120 aaPredicted RBP10.25□□□□□ -0.77
LINC00339-209ENST00000635450 NRACQ8N912 160 aa10.25□□□□□ -0.77
LINC00339-209ENST00000635450 BTF3L4Q96K17 158 aa10.25□□□□□ -0.77
LINC00339-209ENST00000635450 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.24□□□□□ -0.77
LINC00339-209ENST00000635450 TSHBP01222 138 aa10.24□□□□□ -0.77
LINC00339-209ENST00000635450 FGF6P10767 208 aa10.24□□□□□ -0.77
LINC00339-209ENST00000635450 ADCYAP1P18509 176 aa10.24□□□□□ -0.77
LINC00339-209ENST00000635450 FCER1GP30273 86 aa10.24□□□□□ -0.77
LINC00339-209ENST00000635450 C14orf177Q52M58 125 aa10.24□□□□□ -0.77
LINC00339-209ENST00000635450 KIR2DL4Q99706 377 aa10.24□□□□□ -0.77
LINC00339-209ENST00000635450 SEC11CQ9BY50 192 aa10.24□□□□□ -0.77
LINC00339-209ENST00000635450 IGLV10-54A0A075B6I4 117 aa10.23□□□□□ -0.77
LINC00339-209ENST00000635450 D6R8Y8 96 aa10.23□□□□□ -0.77
LINC00339-209ENST00000635450 PPBPP02775 128 aa10.23□□□□□ -0.77
LINC00339-209ENST00000635450 ZNF25P17030 456 aaPredicted RBP10.23□□□□□ -0.77
LINC00339-209ENST00000635450 TMEM101Q96IK0 257 aa10.23□□□□□ -0.77
LINC00339-209ENST00000635450 C20orf78Q9BR46 151 aa10.23□□□□□ -0.77
LINC00339-209ENST00000635450 TRBV24-1A0A075B6N3 115 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms