RNA–Protein interactions for RNA: ENST00000635193.1

COL11A1-211, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL11A1, Length 5,289 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-211ENST00000635193 RPL18AQ02543 176 aaKnown RBP8.86□□□□□ -0.99
COL11A1-211ENST00000635193 CEMP1Q6PRD7 247 aaPredicted RBP8.86□□□□□ -0.99
COL11A1-211ENST00000635193 IGKV2D-24A0A075B6R9 120 aa8.86□□□□□ -0.99
COL11A1-211ENST00000635193 GPHB5Q86YW7 130 aa8.86□□□□□ -0.99
COL11A1-211ENST00000635193 LINC00694P0DN24 101 aa8.85□□□□□ -0.99
COL11A1-211ENST00000635193 BPY2O14599 106 aa8.85□□□□□ -0.99
COL11A1-211ENST00000635193 SPRY4Q9C004 299 aa8.85□□□□□ -0.99
COL11A1-211ENST00000635193 FREM1Q5H8C1 2179 aa8.85□□□□□ -0.99
COL11A1-211ENST00000635193 USP17L23D6RBM5 183 aa8.85□□□□□ -0.99
COL11A1-211ENST00000635193 ATP5EP56381 51 aaPredicted RBP8.85□□□□□ -0.99
COL11A1-211ENST00000635193 TMEM223A0PJW6 202 aa8.84□□□□□ -0.99
COL11A1-211ENST00000635193 C1orf195Q5TG92 126 aa8.84□□□□□ -0.99
COL11A1-211ENST00000635193 U3KQK5 164 aa8.84□□□□□ -0.99
COL11A1-211ENST00000635193 DSCAML1Q8TD84 2053 aa8.84□□□□□ -0.99
COL11A1-211ENST00000635193 A0A0J9YX75 114 aa8.84□□□□□ -0.99
COL11A1-211ENST00000635193 J3QKU1 62 aa8.84□□□□□ -0.99
COL11A1-211ENST00000635193 ZNF22P17026 224 aaPredicted RBP8.84□□□□□ -0.99
COL11A1-211ENST00000635193 UFSP1Q6NVU6 142 aa8.84□□□□□ -0.99
COL11A1-211ENST00000635193 CCDC140Q96MF4 163 aa8.84□□□□□ -0.99
COL11A1-211ENST00000635193 IGHV4-30-2A0A087WSY4 118 aa8.83□□□□□ -1
COL11A1-211ENST00000635193 WISP2O76076 250 aa8.83□□□□□ -1
COL11A1-211ENST00000635193 CRIP1P50238 77 aa8.83□□□□□ -1
COL11A1-211ENST00000635193 Q6Q795 121 aa8.83□□□□□ -1
COL11A1-211ENST00000635193 A0A1W2PNU3 283 aaPredicted RBP8.83□□□□□ -1
COL11A1-211ENST00000635193 SIRPDQ9H106 197 aa8.83□□□□□ -1
COL11A1-211ENST00000635193 NDUFC1O43677 76 aa8.82□□□□□ -1
COL11A1-211ENST00000635193 IGHV3-30P01768 117 aa8.82□□□□□ -1
COL11A1-211ENST00000635193 IGHV3-30-5P0DP03 117 aa8.82□□□□□ -1
COL11A1-211ENST00000635193 MYCNOSP40205 109 aa8.82□□□□□ -1
COL11A1-211ENST00000635193 SMIM9A6NGZ8 99 aa8.82□□□□□ -1
COL11A1-211ENST00000635193 NDUFA1O15239 70 aa8.82□□□□□ -1
COL11A1-211ENST00000635193 LINC00308Q8TCZ7 52 aa8.82□□□□□ -1
COL11A1-211ENST00000635193 IGF2-ASQ6U949 168 aa8.81□□□□□ -1
COL11A1-211ENST00000635193 COX7BP24311 80 aa8.81□□□□□ -1
COL11A1-211ENST00000635193 Q8N976 141 aa8.81□□□□□ -1
COL11A1-211ENST00000635193 RNF185Q96GF1 192 aa8.81□□□□□ -1
COL11A1-211ENST00000635193 HRCT1Q6UXD1 115 aa8.81□□□□□ -1
COL11A1-211ENST00000635193 TIMM17BO60830 172 aa8.81□□□□□ -1
COL11A1-211ENST00000635193 LINC00310P59036 64 aa8.81□□□□□ -1
COL11A1-211ENST00000635193 TMEM131Q92545 1883 aa8.8□□□□□ -1
COL11A1-211ENST00000635193 PIK3CD-AS1Q5SR53 167 aa8.8□□□□□ -1
COL11A1-211ENST00000635193 OTOGLQ3ZCN5 2332 aa8.8□□□□□ -1
COL11A1-211ENST00000635193 PTPN13Q12923 2485 aa8.8□□□□□ -1
COL11A1-211ENST00000635193 SLPIP03973 132 aa8.8□□□□□ -1
COL11A1-211ENST00000635193 SPAG11BQ08648 103 aa8.8□□□□□ -1
COL11A1-211ENST00000635193 SCXQ7RTU7 201 aa8.8□□□□□ -1
COL11A1-211ENST00000635193 HHLA3Q9XRX5 114 aa8.8□□□□□ -1
COL11A1-211ENST00000635193 CDKN2A-AS1Q9UH64 79 aa8.8□□□□□ -1
COL11A1-211ENST00000635193 ADAMTS9Q9P2N4 1935 aa8.8□□□□□ -1
COL11A1-211ENST00000635193 NCOR2Q9Y618 2525 aa8.79□□□□□ -1
COL11A1-211ENST00000635193 ODF3BA8MYP8 253 aa8.79□□□□□ -1
COL11A1-211ENST00000635193 TMEM89A2RUT3 159 aa8.79□□□□□ -1
COL11A1-211ENST00000635193 LST1O00453 97 aa8.79□□□□□ -1
COL11A1-211ENST00000635193 IGLV2-11P01706 119 aa8.79□□□□□ -1
COL11A1-211ENST00000635193 SNURFQ9Y675 71 aa8.79□□□□□ -1
COL11A1-211ENST00000635193 IGLV4-3A0A075B6K6 122 aa8.79□□□□□ -1
COL11A1-211ENST00000635193 ADORA2A-AS1P86434 159 aa8.79□□□□□ -1
COL11A1-211ENST00000635193 C20orf173Q96LM9 149 aa8.78□□□□□ -1
COL11A1-211ENST00000635193 TRBV10-1A0A0K0K1A3 114 aa8.78□□□□□ -1
COL11A1-211ENST00000635193 ESM1Q9NQ30 184 aa8.78□□□□□ -1
COL11A1-211ENST00000635193 TECTAO75443 2155 aa8.78□□□□□ -1
COL11A1-211ENST00000635193 LINC01548A6NM66 108 aa8.77□□□□□ -1
COL11A1-211ENST00000635193 IGF1P05019 195 aa8.77□□□□□ -1
COL11A1-211ENST00000635193 TIRAPP58753 221 aa8.77□□□□□ -1
COL11A1-211ENST00000635193 SONP18583 2426 aaKnown RBP8.77□□□□□ -1.01
COL11A1-211ENST00000635193 PCNX3Q9H6A9 2034 aa8.76□□□□□ -1.01
COL11A1-211ENST00000635193 SMIM26A0A096LP01 95 aa8.76□□□□□ -1.01
COL11A1-211ENST00000635193 SPART-AS1P0CW21 52 aa8.76□□□□□ -1.01
COL11A1-211ENST00000635193 ODF3Q96PU9 254 aa8.76□□□□□ -1.01
COL11A1-211ENST00000635193 TMEM263Q8WUH6 116 aaKnown RBP8.76□□□□□ -1.01
COL11A1-211ENST00000635193 A6NDX4 124 aa8.76□□□□□ -1.01
COL11A1-211ENST00000635193 SMAD5-AS1Q9Y6J3 95 aa8.76□□□□□ -1.01
COL11A1-211ENST00000635193 C2orf16Q68DN1 1984 aa8.76□□□□□ -1.01
COL11A1-211ENST00000635193 MED12LQ86YW9 2145 aa8.76□□□□□ -1.01
COL11A1-211ENST00000635193 H7C423 109 aa8.76□□□□□ -1.01
COL11A1-211ENST00000635193 MYO18BQ8IUG5 2567 aa8.75□□□□□ -1.01
COL11A1-211ENST00000635193 LINC00467Q9BRT7 94 aa8.75□□□□□ -1.01
COL11A1-211ENST00000635193 UTRNP46939 3433 aa8.75□□□□□ -1.01
COL11A1-211ENST00000635193 H0Y9J4 135 aa8.74□□□□□ -1.01
COL11A1-211ENST00000635193 ZFAND3Q9H8U3 227 aa8.74□□□□□ -1.01
COL11A1-211ENST00000635193 CSPG4Q6UVK1 2322 aa8.74□□□□□ -1.01
COL11A1-211ENST00000635193 C4orf3Q8WVX3 66 aa8.74□□□□□ -1.01
COL11A1-211ENST00000635193 C9orf66Q5T8R8 295 aa8.74□□□□□ -1.01
COL11A1-211ENST00000635193 ZFAND2AQ8N6M9 145 aa8.74□□□□□ -1.01
COL11A1-211ENST00000635193 LINC00526Q96FQ7 95 aa8.74□□□□□ -1.01
COL11A1-211ENST00000635193 MAP6D1Q9H9H5 199 aa8.74□□□□□ -1.01
COL11A1-211ENST00000635193 NUP210LQ5VU65 1888 aa8.74□□□□□ -1.01
COL11A1-211ENST00000635193 Q6JHZ5 121 aa8.73□□□□□ -1.01
COL11A1-211ENST00000635193 Q6ZS46 218 aa8.73□□□□□ -1.01
COL11A1-211ENST00000635193 COL4A4P53420 1690 aaPredicted RBP8.73□□□□□ -1.01
COL11A1-211ENST00000635193 FAM19A3Q7Z5A8 133 aa8.73□□□□□ -1.01
COL11A1-211ENST00000635193 NRACQ8N912 160 aa8.73□□□□□ -1.01
COL11A1-211ENST00000635193 IBA57-AS1B1ANH7 110 aa8.73□□□□□ -1.01
COL11A1-211ENST00000635193 M0QY20 66 aa8.73□□□□□ -1.01
COL11A1-211ENST00000635193 TNCP24821 2201 aa8.73□□□□□ -1.01
COL11A1-211ENST00000635193 MRPS36P82909 103 aaKnown RBP8.73□□□□□ -1.01
COL11A1-211ENST00000635193 SEC61GP60059 68 aa8.72□□□□□ -1.01
COL11A1-211ENST00000635193 DEFB113Q30KQ7 82 aa8.72□□□□□ -1.01
COL11A1-211ENST00000635193 FBXL19-AS1Q494R0 122 aa8.72□□□□□ -1.01
COL11A1-211ENST00000635193 FAM222AQ5U5X8 452 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms