RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 PPP1R17O96001 155 aa10.27□□□□□ -0.77
LINC00339-208ENST00000634934 RPL32P62910 135 aaKnown RBP10.27□□□□□ -0.77
LINC00339-208ENST00000634934 POM121L12Q8N7R1 296 aa10.27□□□□□ -0.77
LINC00339-208ENST00000634934 C20orf78Q9BR46 151 aa10.27□□□□□ -0.77
LINC00339-208ENST00000634934 MSRB1Q9NZV6 116 aa10.27□□□□□ -0.77
LINC00339-208ENST00000634934 DNAH7Q8WXX0 4024 aa10.26□□□□□ -0.77
LINC00339-208ENST00000634934 C9orf118A6NHY6 69 aa10.26□□□□□ -0.77
LINC00339-208ENST00000634934 NANOS2P60321 138 aaKnown RBP10.26□□□□□ -0.77
LINC00339-208ENST00000634934 PTH2Q96A98 100 aa10.26□□□□□ -0.77
LINC00339-208ENST00000634934 MUC4Q99102 2169 aa10.26□□□□□ -0.77
LINC00339-208ENST00000634934 SMKR1H3BMG3 65 aa10.25□□□□□ -0.77
LINC00339-208ENST00000634934 DPM2O94777 84 aa10.25□□□□□ -0.77
LINC00339-208ENST00000634934 NXPH4O95158 308 aa10.25□□□□□ -0.77
LINC00339-208ENST00000634934 RBX1P62877 108 aa10.25□□□□□ -0.77
LINC00339-208ENST00000634934 LAGE3Q14657 143 aa10.25□□□□□ -0.77
LINC00339-208ENST00000634934 TAL2Q16559 108 aa10.25□□□□□ -0.77
LINC00339-208ENST00000634934 C12orf74Q32Q52 190 aa10.25□□□□□ -0.77
LINC00339-208ENST00000634934 LINC00612Q8N6U2 182 aa10.25□□□□□ -0.77
LINC00339-208ENST00000634934 JPT2Q9H910 190 aa10.25□□□□□ -0.77
LINC00339-208ENST00000634934 EDA2RQ9HAV5 297 aa10.25□□□□□ -0.77
LINC00339-208ENST00000634934 H0Y8G0 127 aa10.24□□□□□ -0.77
LINC00339-208ENST00000634934 IGHV3-53P01767 116 aa10.24□□□□□ -0.77
LINC00339-208ENST00000634934 IGKCP01834 107 aa10.24□□□□□ -0.77
LINC00339-208ENST00000634934 UFSP1Q6NVU6 142 aa10.24□□□□□ -0.77
LINC00339-208ENST00000634934 GTF2H5Q6ZYL4 71 aa10.24□□□□□ -0.77
LINC00339-208ENST00000634934 PLNP26678 52 aa10.23□□□□□ -0.77
LINC00339-208ENST00000634934 ORMDL2Q53FV1 153 aa10.23□□□□□ -0.77
LINC00339-208ENST00000634934 PIK3CD-AS1Q5SR53 167 aa10.23□□□□□ -0.77
LINC00339-208ENST00000634934 TP73-AS1Q9UF72 201 aa10.23□□□□□ -0.77
LINC00339-208ENST00000634934 A8MWV9 139 aa10.23□□□□□ -0.77
LINC00339-208ENST00000634934 SMIM17P0DL12 118 aa10.23□□□□□ -0.77
LINC00339-208ENST00000634934 HTN3P15516 51 aa10.23□□□□□ -0.77
LINC00339-208ENST00000634934 CFAP126Q5VTH2 177 aa10.23□□□□□ -0.77
LINC00339-208ENST00000634934 Q6ZTC4 211 aa10.23□□□□□ -0.77
LINC00339-208ENST00000634934 Q6ZVH6 145 aa10.23□□□□□ -0.77
LINC00339-208ENST00000634934 AP1S3Q96PC3 154 aa10.23□□□□□ -0.77
LINC00339-208ENST00000634934 CSMD3Q7Z407 3707 aa10.22□□□□□ -0.77
LINC00339-208ENST00000634934 A0A087WWL8 130 aa10.22□□□□□ -0.77
LINC00339-208ENST00000634934 A0A087WX48 190 aa10.22□□□□□ -0.77
LINC00339-208ENST00000634934 IGHV3-73A0A0B4J1V6 119 aa10.22□□□□□ -0.77
LINC00339-208ENST00000634934 TRAV4A0A0B4J268 109 aa10.22□□□□□ -0.77
LINC00339-208ENST00000634934 RS1O15537 224 aa10.22□□□□□ -0.77
LINC00339-208ENST00000634934 FAM74A4Q5TZK3 123 aa10.22□□□□□ -0.77
LINC00339-208ENST00000634934 C14orf178Q8N769 122 aaPredicted RBP10.22□□□□□ -0.77
LINC00339-208ENST00000634934 OR5A1Q8NGJ0 315 aa10.22□□□□□ -0.77
LINC00339-208ENST00000634934 ZNF479Q96JC4 524 aa10.22□□□□□ -0.77
LINC00339-208ENST00000634934 WWC2-AS2Q96NR7 200 aa10.22□□□□□ -0.77
LINC00339-208ENST00000634934 SMIM2Q9BVW6 85 aa10.22□□□□□ -0.77
LINC00339-208ENST00000634934 TM2D2Q9BX73 214 aa10.22□□□□□ -0.77
LINC00339-208ENST00000634934 TRAV8-6A0A0B4J262 113 aa10.21□□□□□ -0.78
LINC00339-208ENST00000634934 ATP5G1P05496 136 aa10.21□□□□□ -0.78
LINC00339-208ENST00000634934 AMMECR1LQ6DCA0 310 aa10.21□□□□□ -0.78
LINC00339-208ENST00000634934 C18orf15Q96N68 181 aa10.21□□□□□ -0.78
LINC00339-208ENST00000634934 DPH3P1Q9H4G8 78 aa10.21□□□□□ -0.78
LINC00339-208ENST00000634934 CST9LQ9H4G1 147 aa10.2□□□□□ -0.78
LINC00339-208ENST00000634934 TRGV4A0A0C4DH28 118 aa10.19□□□□□ -0.78
LINC00339-208ENST00000634934 F5H768 121 aa10.19□□□□□ -0.78
LINC00339-208ENST00000634934 K7EP34 96 aa10.19□□□□□ -0.78
LINC00339-208ENST00000634934 CRYGDP07320 174 aa10.19□□□□□ -0.78
LINC00339-208ENST00000634934 PRSS1P07477 247 aa10.19□□□□□ -0.78
LINC00339-208ENST00000634934 TOMM6Q96B49 74 aa10.19□□□□□ -0.78
LINC00339-208ENST00000634934 RHODO00212 210 aa10.18□□□□□ -0.78
LINC00339-208ENST00000634934 GAS8-AS1O95177 125 aa10.18□□□□□ -0.78
LINC00339-208ENST00000634934 MGPP08493 103 aa10.18□□□□□ -0.78
LINC00339-208ENST00000634934 PCP2Q8IVA1 136 aa10.18□□□□□ -0.78
LINC00339-208ENST00000634934 DEFB131BA0A096LNP1 70 aa10.17□□□□□ -0.78
LINC00339-208ENST00000634934 GAGE10A6NGK3 116 aa10.17□□□□□ -0.78
LINC00339-208ENST00000634934 F5H697 171 aa10.17□□□□□ -0.78
LINC00339-208ENST00000634934 F8VRH5 84 aa10.17□□□□□ -0.78
LINC00339-208ENST00000634934 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.17□□□□□ -0.78
LINC00339-208ENST00000634934 H7C1H1 209 aa10.17□□□□□ -0.78
LINC00339-208ENST00000634934 K7ERU9 68 aa10.17□□□□□ -0.78
LINC00339-208ENST00000634934 SUMO2P61956 95 aaKnown RBP10.17□□□□□ -0.78
LINC00339-208ENST00000634934 ZNF56Q15929 161 aa10.17□□□□□ -0.78
LINC00339-208ENST00000634934 OCIAD2Q56VL3 154 aa10.17□□□□□ -0.78
LINC00339-208ENST00000634934 ZFP2Q6ZN57 461 aa10.17□□□□□ -0.78
LINC00339-208ENST00000634934 STARD9Q9P2P6 4700 aa10.17□□□□□ -0.78
LINC00339-208ENST00000634934 TRAV10A0A0B4J240 114 aa10.17□□□□□ -0.78
LINC00339-208ENST00000634934 NMUP48645 174 aa10.17□□□□□ -0.78
LINC00339-208ENST00000634934 FHL2Q14192 279 aa10.17□□□□□ -0.78
LINC00339-208ENST00000634934 KIF25-AS1Q9Y6Z4 181 aa10.17□□□□□ -0.78
LINC00339-208ENST00000634934 A0A1W2PPM0 123 aa10.16□□□□□ -0.78
LINC00339-208ENST00000634934 CIDEAO60543 219 aa10.16□□□□□ -0.78
LINC00339-208ENST00000634934 SMIM13P0DJ93 91 aa10.16□□□□□ -0.78
LINC00339-208ENST00000634934 GATA1P15976 413 aaPredicted RBP10.16□□□□□ -0.78
LINC00339-208ENST00000634934 ZC2HC1BQ5TFG8 222 aa10.16□□□□□ -0.78
LINC00339-208ENST00000634934 PHLDA1Q8WV24 401 aaPredicted RBP10.16□□□□□ -0.78
LINC00339-208ENST00000634934 CHAC1Q9BUX1 264 aa10.16□□□□□ -0.78
LINC00339-208ENST00000634934 TRBV25-1A0A075B6N4 114 aa10.15□□□□□ -0.78
LINC00339-208ENST00000634934 Q6ZSN1 163 aa10.15□□□□□ -0.78
LINC00339-208ENST00000634934 MRPL35Q9NZE8 188 aaKnown RBP10.15□□□□□ -0.78
LINC00339-208ENST00000634934 IGKV2D-26A0A0A0MRZ7 120 aa10.14□□□□□ -0.79
LINC00339-208ENST00000634934 A0A0J9YY99 117 aa10.14□□□□□ -0.79
LINC00339-208ENST00000634934 LINC00315P59091 139 aa10.14□□□□□ -0.79
LINC00339-208ENST00000634934 PAPPA-AS1Q5QFB9 102 aa10.14□□□□□ -0.79
LINC00339-208ENST00000634934 NEXN-AS1Q8NBZ9 246 aa10.14□□□□□ -0.79
LINC00339-208ENST00000634934 TRAV26-1A0A087WT03 109 aa10.13□□□□□ -0.79
LINC00339-208ENST00000634934 TRBV6-5A0A0K0K1A5 114 aa10.13□□□□□ -0.79
LINC00339-208ENST00000634934 A0A1B0GWB2 263 aa10.13□□□□□ -0.79
LINC00339-208ENST00000634934 ERASQ7Z444 233 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms