RNA–Protein interactions for RNA: ENST00000631020.2

PNKP-224, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-224ENST00000631020 LINC00310P59036 64 aa12.85□□□□□ -0.35
PNKP-224ENST00000631020 ESRGQ1W209 222 aa12.85□□□□□ -0.35
PNKP-224ENST00000631020 KIAA1644Q3SXP7 199 aa12.85□□□□□ -0.35
PNKP-224ENST00000631020 ZNRF2Q8NHG8 242 aa12.85□□□□□ -0.35
PNKP-224ENST00000631020 NEGR1Q7Z3B1 354 aa12.84□□□□□ -0.35
PNKP-224ENST00000631020 C18orf32Q8TCD1 76 aa12.83□□□□□ -0.35
PNKP-224ENST00000631020 C14orf144Q96I85 54 aa12.83□□□□□ -0.35
PNKP-224ENST00000631020 TRBV7-3A0A075B6L6 115 aa12.83□□□□□ -0.36
PNKP-224ENST00000631020 H7C1H1 209 aa12.83□□□□□ -0.36
PNKP-224ENST00000631020 RPL36AP83881 106 aaKnown RBP12.83□□□□□ -0.36
PNKP-224ENST00000631020 MRPL51Q4U2R6 128 aaKnown RBP12.83□□□□□ -0.36
PNKP-224ENST00000631020 LYPD5Q6UWN5 251 aa12.83□□□□□ -0.36
PNKP-224ENST00000631020 Q6ZR54 194 aa12.83□□□□□ -0.36
PNKP-224ENST00000631020 RPL36ALQ969Q0 106 aaKnown RBP12.83□□□□□ -0.36
PNKP-224ENST00000631020 DNAH2Q9P225 4427 aa12.82□□□□□ -0.36
PNKP-224ENST00000631020 HSBP1O75506 76 aa12.82□□□□□ -0.36
PNKP-224ENST00000631020 PMCHP20382 165 aa12.82□□□□□ -0.36
PNKP-224ENST00000631020 UBE2D3P61077 147 aa12.82□□□□□ -0.36
PNKP-224ENST00000631020 UBE2D2P62837 147 aa12.82□□□□□ -0.36
PNKP-224ENST00000631020 TEX43Q6ZNM6 134 aa12.82□□□□□ -0.36
PNKP-224ENST00000631020 ATP6V0E2Q8NHE4 81 aa12.82□□□□□ -0.36
PNKP-224ENST00000631020 RPL39LQ96EH5 51 aaKnown RBP12.82□□□□□ -0.36
PNKP-224ENST00000631020 LINC00588Q9Y4M8 146 aa12.82□□□□□ -0.36
PNKP-224ENST00000631020 SMKR1H3BMG3 65 aa12.81□□□□□ -0.36
PNKP-224ENST00000631020 SH2D6Q7Z4S9 175 aa12.81□□□□□ -0.36
PNKP-224ENST00000631020 MRAP2Q96G30 205 aa12.81□□□□□ -0.36
PNKP-224ENST00000631020 ALKBH7Q9BT30 221 aaPredicted RBP12.81□□□□□ -0.36
PNKP-224ENST00000631020 VAMP8Q9BV40 100 aa12.81□□□□□ -0.36
PNKP-224ENST00000631020 FAT2Q9NYQ8 4349 aa12.81□□□□□ -0.36
PNKP-224ENST00000631020 KRTDAPP60985 99 aa12.8□□□□□ -0.36
PNKP-224ENST00000631020 MRPL52Q86TS9 123 aaKnown RBP12.8□□□□□ -0.36
PNKP-224ENST00000631020 DNAJC30Q96LL9 226 aa12.8□□□□□ -0.36
PNKP-224ENST00000631020 RTL8CO15255 209 aa12.79□□□□□ -0.36
PNKP-224ENST00000631020 NCR2O95944 276 aa12.79□□□□□ -0.36
PNKP-224ENST00000631020 CCL18P55774 89 aa12.79□□□□□ -0.36
PNKP-224ENST00000631020 TNFRSF18Q9Y5U5 241 aa12.79□□□□□ -0.36
PNKP-224ENST00000631020 DNAH17Q9UFH2 4485 aa12.78□□□□□ -0.36
PNKP-224ENST00000631020 M0R2N4 97 aa12.78□□□□□ -0.36
PNKP-224ENST00000631020 CHCHD1Q96BP2 118 aaKnown RBP12.78□□□□□ -0.36
PNKP-224ENST00000631020 IGHV3-38A0A0C4DH36 116 aa12.78□□□□□ -0.36
PNKP-224ENST00000631020 A0A1B0GVY2 172 aa12.78□□□□□ -0.36
PNKP-224ENST00000631020 NRACQ8N912 160 aa12.78□□□□□ -0.36
PNKP-224ENST00000631020 GTSF1LQ9H1H1 148 aa12.78□□□□□ -0.36
PNKP-224ENST00000631020 IGLV2-18A0A075B6J9 118 aa12.77□□□□□ -0.37
PNKP-224ENST00000631020 PMCHL1Q16048 86 aa12.77□□□□□ -0.37
PNKP-224ENST00000631020 RNASEKQ6P5S7 137 aaKnown RBP12.77□□□□□ -0.37
PNKP-224ENST00000631020 TRBV6-5A0A0K0K1A5 114 aa12.76□□□□□ -0.37
PNKP-224ENST00000631020 PRSS29PA6NIE9 313 aa12.76□□□□□ -0.37
PNKP-224ENST00000631020 D6R8Y8 96 aa12.76□□□□□ -0.37
PNKP-224ENST00000631020 CKS2P33552 79 aa12.76□□□□□ -0.37
PNKP-224ENST00000631020 TIRAPP58753 221 aa12.76□□□□□ -0.37
PNKP-224ENST00000631020 C2orf88Q9BSF0 95 aa12.75□□□□□ -0.37
PNKP-224ENST00000631020 MRPS16Q9Y3D3 137 aaKnown RBP12.75□□□□□ -0.37
PNKP-224ENST00000631020 DAZ4Q86SG3 579 aaKnown RBP12.74□□□□□ -0.37
PNKP-224ENST00000631020 DEFB104AQ8WTQ1 72 aa12.74□□□□□ -0.37
PNKP-224ENST00000631020 DAZ3Q9NR90 486 aaKnown RBP12.74□□□□□ -0.37
PNKP-224ENST00000631020 C1orf134Q5TEV5 83 aa12.73□□□□□ -0.37
PNKP-224ENST00000631020 NTM-AS1Q6ZSK4 140 aa12.73□□□□□ -0.37
PNKP-224ENST00000631020 NIT1Q86X76 327 aa12.73□□□□□ -0.37
PNKP-224ENST00000631020 MIEN1Q9BRT3 115 aa12.73□□□□□ -0.37
PNKP-224ENST00000631020 PKHD1P08F94 4074 aa12.73□□□□□ -0.37
PNKP-224ENST00000631020 SDHAF1A6NFY7 115 aa12.72□□□□□ -0.37
PNKP-224ENST00000631020 M0R143 59 aa12.72□□□□□ -0.37
PNKP-224ENST00000631020 TNFRSF6BO95407 300 aa12.72□□□□□ -0.37
PNKP-224ENST00000631020 NPYP01303 97 aa12.72□□□□□ -0.37
PNKP-224ENST00000631020 PPBPP02775 128 aa12.72□□□□□ -0.37
PNKP-224ENST00000631020 C3orf79P0CE67 100 aa12.72□□□□□ -0.37
PNKP-224ENST00000631020 BTF3P20290 206 aaKnown RBP12.72□□□□□ -0.37
PNKP-224ENST00000631020 POLR2KP53803 58 aaKnown RBP12.72□□□□□ -0.37
PNKP-224ENST00000631020 LELP1Q5T871 98 aa12.72□□□□□ -0.37
PNKP-224ENST00000631020 ORMDL3Q8N138 153 aa12.72□□□□□ -0.37
PNKP-224ENST00000631020 UPK3BQ9BT76 320 aa12.72□□□□□ -0.37
PNKP-224ENST00000631020 ST20Q9HBF5 79 aa12.72□□□□□ -0.37
PNKP-224ENST00000631020 C20orf202A1L168 122 aa12.72□□□□□ -0.37
PNKP-224ENST00000631020 TMEM70Q9BUB7 260 aa12.72□□□□□ -0.37
PNKP-224ENST00000631020 NBDYA0A0U1RRE5 68 aa12.71□□□□□ -0.38
PNKP-224ENST00000631020 PPP1R17O96001 155 aa12.71□□□□□ -0.38
PNKP-224ENST00000631020 WFDC10BQ8IUB3 73 aa12.71□□□□□ -0.38
PNKP-224ENST00000631020 FAM19A2Q8N3H0 131 aa12.71□□□□□ -0.38
PNKP-224ENST00000631020 PRELID3AQ96N28 172 aa12.71□□□□□ -0.38
PNKP-224ENST00000631020 PAM16Q9Y3D7 125 aa12.71□□□□□ -0.38
PNKP-224ENST00000631020 TRBV6-8A0A0A6YYG3 113 aa12.7□□□□□ -0.38
PNKP-224ENST00000631020 SUMO2P61956 95 aaKnown RBP12.7□□□□□ -0.38
PNKP-224ENST00000631020 Q9H8V8 135 aa12.7□□□□□ -0.38
PNKP-224ENST00000631020 PKD1P98161 4303 aa12.7□□□□□ -0.38
PNKP-224ENST00000631020 LINC00614P0C842 121 aa12.69□□□□□ -0.38
PNKP-224ENST00000631020 C20orf78Q9BR46 151 aa12.69□□□□□ -0.38
PNKP-224ENST00000631020 TRBV27A0A0K0K1C4 114 aa12.68□□□□□ -0.38
PNKP-224ENST00000631020 SPATA45Q537H7 98 aa12.68□□□□□ -0.38
PNKP-224ENST00000631020 Q8N976 141 aa12.68□□□□□ -0.38
PNKP-224ENST00000631020 I3L3M4 83 aa12.67□□□□□ -0.38
PNKP-224ENST00000631020 HSPB8Q9UJY1 196 aa12.67□□□□□ -0.38
PNKP-224ENST00000631020 VCYO14598 125 aa12.67□□□□□ -0.38
PNKP-224ENST00000631020 LEPROTL1O95214 131 aa12.67□□□□□ -0.38
PNKP-224ENST00000631020 UQCR10Q9UDW1 63 aa12.67□□□□□ -0.38
PNKP-224ENST00000631020 HERC2O95714 4834 aa12.66□□□□□ -0.38
PNKP-224ENST00000631020 TRAV8-6A0A0B4J262 113 aa12.66□□□□□ -0.38
PNKP-224ENST00000631020 SIVA1O15304 175 aa12.66□□□□□ -0.38
PNKP-224ENST00000631020 TSHBP01222 138 aa12.66□□□□□ -0.38
PNKP-224ENST00000631020 COTL1Q14019 142 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms