RNA–Protein interactions for RNA: ENST00000628343.2

SOX2-OT-246, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 746 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-246ENST00000628343 NRACQ8N912 160 aa9.05□□□□□ -0.96
SOX2-OT-246ENST00000628343 UBE2WQ96B02 151 aa9.05□□□□□ -0.96
SOX2-OT-246ENST00000628343 ST20Q9HBF5 79 aa9.05□□□□□ -0.96
SOX2-OT-246ENST00000628343 LRCOL1A6NCL2 159 aa9.04□□□□□ -0.96
SOX2-OT-246ENST00000628343 PSCAO43653 123 aa9.04□□□□□ -0.96
SOX2-OT-246ENST00000628343 ANGP03950 147 aaKnown RBP9.04□□□□□ -0.96
SOX2-OT-246ENST00000628343 ENHOQ6UWT2 76 aa9.04□□□□□ -0.96
SOX2-OT-246ENST00000628343 ATP5L2Q7Z4Y8 100 aa9.04□□□□□ -0.96
SOX2-OT-246ENST00000628343 TMEM70Q9BUB7 260 aa9.04□□□□□ -0.96
SOX2-OT-246ENST00000628343 PKHD1P08F94 4074 aa9.03□□□□□ -0.96
SOX2-OT-246ENST00000628343 I3L3M4 83 aa9.03□□□□□ -0.96
SOX2-OT-246ENST00000628343 S100A8P05109 93 aa9.03□□□□□ -0.96
SOX2-OT-246ENST00000628343 POLR2KP53803 58 aaKnown RBP9.03□□□□□ -0.96
SOX2-OT-246ENST00000628343 C10orf91Q5T1B1 145 aa9.03□□□□□ -0.96
SOX2-OT-246ENST00000628343 TM2D2Q9BX73 214 aa9.03□□□□□ -0.96
SOX2-OT-246ENST00000628343 IGLV4-60A0A075B6I1 120 aa9.02□□□□□ -0.97
SOX2-OT-246ENST00000628343 TSHBP01222 138 aa9.02□□□□□ -0.97
SOX2-OT-246ENST00000628343 PMCHP20382 165 aa9.02□□□□□ -0.97
SOX2-OT-246ENST00000628343 FUSP35637 526 aaKnown RBP eCLIP9.02□□□□□ -0.97
SOX2-OT-246ENST00000628343 MAPKAPK5-AS1Q8N8E1 139 aa9.02□□□□□ -0.97
SOX2-OT-246ENST00000628343 C20orf203Q8NBC4 194 aa9.02□□□□□ -0.97
SOX2-OT-246ENST00000628343 TMEM242Q9NWH2 141 aa9.02□□□□□ -0.97
SOX2-OT-246ENST00000628343 IGKV2D-24A0A075B6R9 120 aa9.01□□□□□ -0.97
SOX2-OT-246ENST00000628343 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.01□□□□□ -0.97
SOX2-OT-246ENST00000628343 TRBV27A0A0K0K1C4 114 aa9.01□□□□□ -0.97
SOX2-OT-246ENST00000628343 IGKV2-29A2NJV5 120 aaPredicted RBP9.01□□□□□ -0.97
SOX2-OT-246ENST00000628343 C16orf90A8MZG2 172 aa9.01□□□□□ -0.97
SOX2-OT-246ENST00000628343 EREGO14944 169 aa9.01□□□□□ -0.97
SOX2-OT-246ENST00000628343 PPP1R17O96001 155 aa9.01□□□□□ -0.97
SOX2-OT-246ENST00000628343 APCSP02743 223 aa9.01□□□□□ -0.97
SOX2-OT-246ENST00000628343 CKS2P33552 79 aa9.01□□□□□ -0.97
SOX2-OT-246ENST00000628343 SUMO2P61956 95 aaKnown RBP9.01□□□□□ -0.97
SOX2-OT-246ENST00000628343 Q0VG73 95 aa9.01□□□□□ -0.97
SOX2-OT-246ENST00000628343 WFDC2Q14508 124 aa9.01□□□□□ -0.97
SOX2-OT-246ENST00000628343 CLPSL2Q6UWE3 100 aa9.01□□□□□ -0.97
SOX2-OT-246ENST00000628343 LINC00269Q8N2A0 174 aa9.01□□□□□ -0.97
SOX2-OT-246ENST00000628343 RMI2Q96E14 147 aa9.01□□□□□ -0.97
SOX2-OT-246ENST00000628343 CTDSP1Q9GZU7 261 aa9.01□□□□□ -0.97
SOX2-OT-246ENST00000628343 PRR34Q9NV39 138 aa9.01□□□□□ -0.97
SOX2-OT-246ENST00000628343 CARHSP1Q9Y2V2 147 aaKnown RBP9.01□□□□□ -0.97
SOX2-OT-246ENST00000628343 A0A1B0GUV1 79 aa9□□□□□ -0.97
SOX2-OT-246ENST00000628343 D6R8Y8 96 aa9□□□□□ -0.97
SOX2-OT-246ENST00000628343 UBE2L6O14933 153 aa9□□□□□ -0.97
SOX2-OT-246ENST00000628343 CRPP02741 224 aa9□□□□□ -0.97
SOX2-OT-246ENST00000628343 BTF3L4Q96K17 158 aa9□□□□□ -0.97
SOX2-OT-246ENST00000628343 IMMP2LQ96T52 175 aa9□□□□□ -0.97
SOX2-OT-246ENST00000628343 COX11Q9Y6N1 276 aa9□□□□□ -0.97
SOX2-OT-246ENST00000628343 TRBV24-1A0A075B6N3 115 aa8.99□□□□□ -0.97
SOX2-OT-246ENST00000628343 TNFRSF6BO95407 300 aa8.99□□□□□ -0.97
SOX2-OT-246ENST00000628343 ESDP10768 282 aa8.99□□□□□ -0.97
SOX2-OT-246ENST00000628343 DYNC1H1Q14204 4646 aaKnown RBP8.99□□□□□ -0.97
SOX2-OT-246ENST00000628343 VCYO14598 125 aa8.98□□□□□ -0.97
SOX2-OT-246ENST00000628343 LECT2O14960 151 aa8.98□□□□□ -0.97
SOX2-OT-246ENST00000628343 NPYP01303 97 aa8.98□□□□□ -0.97
SOX2-OT-246ENST00000628343 REG3AQ06141 175 aa8.98□□□□□ -0.97
SOX2-OT-246ENST00000628343 MIAQ16674 131 aa8.98□□□□□ -0.97
SOX2-OT-246ENST00000628343 Q8N814 137 aa8.98□□□□□ -0.97
SOX2-OT-246ENST00000628343 CLRN3Q8NCR9 226 aa8.98□□□□□ -0.97
SOX2-OT-246ENST00000628343 C20orf78Q9BR46 151 aa8.98□□□□□ -0.97
SOX2-OT-246ENST00000628343 C1orf43Q9BWL3 253 aa8.98□□□□□ -0.97
SOX2-OT-246ENST00000628343 C7orf77A4D0Y5 90 aa8.97□□□□□ -0.97
SOX2-OT-246ENST00000628343 H7C423 109 aa8.97□□□□□ -0.97
SOX2-OT-246ENST00000628343 PPBPP02775 128 aa8.97□□□□□ -0.97
SOX2-OT-246ENST00000628343 FGF6P10767 208 aa8.97□□□□□ -0.97
SOX2-OT-246ENST00000628343 RPL32P62910 135 aaKnown RBP8.97□□□□□ -0.97
SOX2-OT-246ENST00000628343 ORMDL3Q8N138 153 aa8.97□□□□□ -0.97
SOX2-OT-246ENST00000628343 BAALCQ8WXS3 180 aa8.97□□□□□ -0.97
SOX2-OT-246ENST00000628343 PGPEP1Q9NXJ5 209 aa8.97□□□□□ -0.97
SOX2-OT-246ENST00000628343 FCER1GP30273 86 aa8.96□□□□□ -0.98
SOX2-OT-246ENST00000628343 RHEBQ15382 184 aa8.96□□□□□ -0.98
SOX2-OT-246ENST00000628343 AMMECR1LQ6DCA0 310 aa8.96□□□□□ -0.98
SOX2-OT-246ENST00000628343 CDPF1Q6NVV7 123 aa8.96□□□□□ -0.98
SOX2-OT-246ENST00000628343 KRTAP26-1Q6PEX3 210 aa8.96□□□□□ -0.98
SOX2-OT-246ENST00000628343 TMEM136Q6ZRR5 245 aa8.96□□□□□ -0.98
SOX2-OT-246ENST00000628343 KIR2DL4Q99706 377 aa8.96□□□□□ -0.98
SOX2-OT-246ENST00000628343 SMIM2Q9BVW6 85 aa8.96□□□□□ -0.98
SOX2-OT-246ENST00000628343 IGLV10-54A0A075B6I4 117 aa8.95□□□□□ -0.98
SOX2-OT-246ENST00000628343 TRAV9-1A0A075B6T8 112 aa8.95□□□□□ -0.98
SOX2-OT-246ENST00000628343 PHOX2AO14813 284 aa8.95□□□□□ -0.98
SOX2-OT-246ENST00000628343 RNASEKQ6P5S7 137 aaKnown RBP8.95□□□□□ -0.98
SOX2-OT-246ENST00000628343 PRELID3AQ96N28 172 aa8.95□□□□□ -0.98
SOX2-OT-246ENST00000628343 RPS10P5Q9NQ39 176 aa8.95□□□□□ -0.98
SOX2-OT-246ENST00000628343 APOC3P02656 99 aa8.94□□□□□ -0.98
SOX2-OT-246ENST00000628343 ZNF25P17030 456 aaPredicted RBP8.94□□□□□ -0.98
SOX2-OT-246ENST00000628343 S100PP25815 95 aa8.94□□□□□ -0.98
SOX2-OT-246ENST00000628343 DNAH5Q8TE73 4624 aa8.93□□□□□ -0.98
SOX2-OT-246ENST00000628343 HLA-DQA1P01909 254 aa8.93□□□□□ -0.98
SOX2-OT-246ENST00000628343 MRPL52Q86TS9 123 aaKnown RBP8.93□□□□□ -0.98
SOX2-OT-246ENST00000628343 NTN5Q8WTR8 489 aaPredicted RBP8.93□□□□□ -0.98
SOX2-OT-246ENST00000628343 LRP1BQ9NZR2 4599 aa8.93□□□□□ -0.98
SOX2-OT-246ENST00000628343 KIAA1109Q2LD37 5005 aa8.93□□□□□ -0.98
SOX2-OT-246ENST00000628343 IGLV5-52A0A0A0MRZ9 124 aa8.92□□□□□ -0.98
SOX2-OT-246ENST00000628343 TRAV8-4A0A0B4J246 113 aa8.92□□□□□ -0.98
SOX2-OT-246ENST00000628343 IGKV3OR2-268A0A0C4DH90 116 aa8.92□□□□□ -0.98
SOX2-OT-246ENST00000628343 OR5A1Q8NGJ0 315 aa8.92□□□□□ -0.98
SOX2-OT-246ENST00000628343 LAMTOR2Q9Y2Q5 125 aa8.92□□□□□ -0.98
SOX2-OT-246ENST00000628343 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.91□□□□□ -0.98
SOX2-OT-246ENST00000628343 PRSS47A8MTI9 375 aa8.91□□□□□ -0.98
SOX2-OT-246ENST00000628343 TCAPO15273 167 aa8.91□□□□□ -0.98
SOX2-OT-246ENST00000628343 KRTAP10-1P60331 282 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms