RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 RPL23P62829 140 aaKnown RBP14.72□□□□□ -0.05
SF1-220ENST00000626028 KRTAP17-1Q9BYP8 105 aa14.72□□□□□ -0.05
SF1-220ENST00000626028 TRAV26-2A0A0B4J265 109 aa14.71□□□□□ -0.05
SF1-220ENST00000626028 TRBV6-5A0A0K0K1A5 114 aa14.71□□□□□ -0.05
SF1-220ENST00000626028 C9JQL5 133 aa14.71□□□□□ -0.05
SF1-220ENST00000626028 AMTP48728 403 aa14.71□□□□□ -0.05
SF1-220ENST00000626028 LINC00269Q8N2A0 174 aa14.71□□□□□ -0.05
SF1-220ENST00000626028 TRAV8-4A0A0B4J246 113 aa14.7□□□□□ -0.06
SF1-220ENST00000626028 UBE2L6O14933 153 aa14.7□□□□□ -0.06
SF1-220ENST00000626028 LECT2O14960 151 aa14.7□□□□□ -0.06
SF1-220ENST00000626028 RIGQ13278 110 aa14.7□□□□□ -0.06
SF1-220ENST00000626028 KRTAP4-5Q9BYR2 181 aa14.7□□□□□ -0.06
SF1-220ENST00000626028 NAT8BQ9UHF3 227 aa14.7□□□□□ -0.06
SF1-220ENST00000626028 H7C423 109 aa14.69□□□□□ -0.06
SF1-220ENST00000626028 ADIRFQ15847 76 aa14.69□□□□□ -0.06
SF1-220ENST00000626028 MRAP2Q96G30 205 aa14.69□□□□□ -0.06
SF1-220ENST00000626028 SDHAF1A6NFY7 115 aa14.68□□□□□ -0.06
SF1-220ENST00000626028 SRSF3P84103 164 aaKnown RBP14.68□□□□□ -0.06
SF1-220ENST00000626028 REG3AQ06141 175 aa14.68□□□□□ -0.06
SF1-220ENST00000626028 NUP35Q8NFH5 326 aa14.68□□□□□ -0.06
SF1-220ENST00000626028 RPL39LQ96EH5 51 aaKnown RBP14.68□□□□□ -0.06
SF1-220ENST00000626028 C20orf203Q8NBC4 194 aa14.67□□□□□ -0.06
SF1-220ENST00000626028 PPP1R17O96001 155 aa14.66□□□□□ -0.06
SF1-220ENST00000626028 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.65□□□□□ -0.06
SF1-220ENST00000626028 A0A1B0GW15 77 aa14.65□□□□□ -0.06
SF1-220ENST00000626028 SMIM27A0A1W2PRY6 76 aa14.65□□□□□ -0.06
SF1-220ENST00000626028 I3L3M4 83 aa14.65□□□□□ -0.06
SF1-220ENST00000626028 RAB4AP20338 218 aa14.65□□□□□ -0.06
SF1-220ENST00000626028 Q6ZSA8 131 aa14.65□□□□□ -0.06
SF1-220ENST00000626028 EPM2AB3EWF7 344 aa14.64□□□□□ -0.07
SF1-220ENST00000626028 APCSP02743 223 aa14.64□□□□□ -0.07
SF1-220ENST00000626028 RAB14P61106 215 aa14.64□□□□□ -0.07
SF1-220ENST00000626028 KRTAP26-1Q6PEX3 210 aa14.64□□□□□ -0.07
SF1-220ENST00000626028 RNF185Q96GF1 192 aa14.64□□□□□ -0.07
SF1-220ENST00000626028 ST20Q9HBF5 79 aa14.64□□□□□ -0.07
SF1-220ENST00000626028 IGLV4-60A0A075B6I1 120 aa14.63□□□□□ -0.07
SF1-220ENST00000626028 HLA-DQA1P01909 254 aa14.63□□□□□ -0.07
SF1-220ENST00000626028 USP17L23D6RBM5 183 aa14.62□□□□□ -0.07
SF1-220ENST00000626028 PMCHP20382 165 aa14.62□□□□□ -0.07
SF1-220ENST00000626028 CLPSL2Q6UWE3 100 aa14.62□□□□□ -0.07
SF1-220ENST00000626028 TRBV27A0A0K0K1C4 114 aa14.61□□□□□ -0.07
SF1-220ENST00000626028 ZNF25P17030 456 aaPredicted RBP14.61□□□□□ -0.07
SF1-220ENST00000626028 DGAT2L7PQ6IED9 249 aa14.61□□□□□ -0.07
SF1-220ENST00000626028 AMN1Q8IY45 258 aa14.61□□□□□ -0.07
SF1-220ENST00000626028 CLRN3Q8NCR9 226 aa14.61□□□□□ -0.07
SF1-220ENST00000626028 POLR2KP53803 58 aaKnown RBP14.6□□□□□ -0.07
SF1-220ENST00000626028 AMMECR1LQ6DCA0 310 aa14.6□□□□□ -0.07
SF1-220ENST00000626028 ABCA13Q86UQ4 5058 aa14.6□□□□□ -0.07
SF1-220ENST00000626028 S100A8P05109 93 aa14.59□□□□□ -0.07
SF1-220ENST00000626028 DEFB104AQ8WTQ1 72 aa14.59□□□□□ -0.07
SF1-220ENST00000626028 LINC00862A6NCI5 91 aa14.58□□□□□ -0.08
SF1-220ENST00000626028 FAM30AQ9NZY2 134 aa14.58□□□□□ -0.08
SF1-220ENST00000626028 VCYO14598 125 aa14.57□□□□□ -0.08
SF1-220ENST00000626028 PPP1R2P9O14990 202 aa14.57□□□□□ -0.08
SF1-220ENST00000626028 FGF6P10767 208 aa14.57□□□□□ -0.08
SF1-220ENST00000626028 ESDP10768 282 aa14.57□□□□□ -0.08
SF1-220ENST00000626028 PNRC1Q12796 327 aaPredicted RBP14.57□□□□□ -0.08
SF1-220ENST00000626028 FAM104BQ5XKR9 115 aa14.57□□□□□ -0.08
SF1-220ENST00000626028 IGLV10-54A0A075B6I4 117 aa14.56□□□□□ -0.08
SF1-220ENST00000626028 FAM229AH3BQW9 127 aa14.56□□□□□ -0.08
SF1-220ENST00000626028 GAS8-AS1O95177 125 aa14.56□□□□□ -0.08
SF1-220ENST00000626028 TSHBP01222 138 aa14.56□□□□□ -0.08
SF1-220ENST00000626028 RPS10P46783 165 aaKnown RBP14.56□□□□□ -0.08
SF1-220ENST00000626028 F8W036 122 aa14.55□□□□□ -0.08
SF1-220ENST00000626028 Q5VSD8 79 aa14.55□□□□□ -0.08
SF1-220ENST00000626028 BTF3L4Q96K17 158 aa14.55□□□□□ -0.08
SF1-220ENST00000626028 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.54□□□□□ -0.08
SF1-220ENST00000626028 IGKV2-29A2NJV5 120 aaPredicted RBP14.54□□□□□ -0.08
SF1-220ENST00000626028 PRSS1P07477 247 aa14.54□□□□□ -0.08
SF1-220ENST00000626028 SUMO2P61956 95 aaKnown RBP14.54□□□□□ -0.08
SF1-220ENST00000626028 RNASEKQ6P5S7 137 aaKnown RBP14.54□□□□□ -0.08
SF1-220ENST00000626028 MRPL52Q86TS9 123 aaKnown RBP14.54□□□□□ -0.08
SF1-220ENST00000626028 NRACQ8N912 160 aa14.54□□□□□ -0.08
SF1-220ENST00000626028 TMEM101Q96IK0 257 aa14.54□□□□□ -0.08
SF1-220ENST00000626028 TRBV24-1A0A075B6N3 115 aa14.53□□□□□ -0.08
SF1-220ENST00000626028 CAMPP49913 170 aa14.53□□□□□ -0.08
SF1-220ENST00000626028 HBBP68871 147 aa14.53□□□□□ -0.08
SF1-220ENST00000626028 SMAGPQ0VAQ4 97 aa14.53□□□□□ -0.08
SF1-220ENST00000626028 CLLU1Q5K131 121 aa14.53□□□□□ -0.08
SF1-220ENST00000626028 KIR2DL4Q99706 377 aa14.53□□□□□ -0.08
SF1-220ENST00000626028 C20orf78Q9BR46 151 aa14.53□□□□□ -0.08
SF1-220ENST00000626028 TCAPO15273 167 aa14.52□□□□□ -0.09
SF1-220ENST00000626028 RPL32P62910 135 aaKnown RBP14.52□□□□□ -0.09
SF1-220ENST00000626028 MRPL51Q4U2R6 128 aaKnown RBP14.52□□□□□ -0.09
SF1-220ENST00000626028 ATP5L2Q7Z4Y8 100 aa14.52□□□□□ -0.09
SF1-220ENST00000626028 TMEM242Q9NWH2 141 aa14.52□□□□□ -0.09
SF1-220ENST00000626028 A0A1B0GXF2 115 aa14.51□□□□□ -0.09
SF1-220ENST00000626028 C7orf77A4D0Y5 90 aa14.51□□□□□ -0.09
SF1-220ENST00000626028 CFAP161Q6P656 301 aa14.51□□□□□ -0.09
SF1-220ENST00000626028 C9orf163Q8N9P6 203 aa14.51□□□□□ -0.09
SF1-220ENST00000626028 OR5A1Q8NGJ0 315 aa14.51□□□□□ -0.09
SF1-220ENST00000626028 SRRM2Q9UQ35 2752 aaKnown RBP14.5□□□□□ -0.09
SF1-220ENST00000626028 PPBPP02775 128 aa14.5□□□□□ -0.09
SF1-220ENST00000626028 SMR3BP02814 79 aaPredicted RBP14.5□□□□□ -0.09
SF1-220ENST00000626028 CNBPP62633 177 aaKnown RBP14.5□□□□□ -0.09
SF1-220ENST00000626028 LINC01620Q4KN68 170 aa14.5□□□□□ -0.09
SF1-220ENST00000626028 ANAPC16Q96DE5 110 aa14.5□□□□□ -0.09
SF1-220ENST00000626028 CHAC1Q9BUX1 264 aa14.5□□□□□ -0.09
SF1-220ENST00000626028 CSDC2Q9Y534 153 aaKnown RBP14.5□□□□□ -0.09
SF1-220ENST00000626028 DNAH8Q96JB1 4490 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms