RNA–Protein interactions for RNA: ENST00000624720.1

USB1-216, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

Gene USB1, Length 2,895 nt, Biotype TEC, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-216ENST00000624720 GHRHP01286 108 aa6.86□□□□□ -1.31
USB1-216ENST00000624720 ARMS2P0C7Q2 107 aa6.86□□□□□ -1.31
USB1-216ENST00000624720 ATP5EP56381 51 aaPredicted RBP6.86□□□□□ -1.31
USB1-216ENST00000624720 F6UB75 175 aa6.86□□□□□ -1.31
USB1-216ENST00000624720 TMEM256-PLSCR3K7ERE1 68 aa6.86□□□□□ -1.31
USB1-216ENST00000624720 LINC00322Q6ZN03 302 aaPredicted RBP6.86□□□□□ -1.31
USB1-216ENST00000624720 DYNAPQ8N1N2 210 aa6.86□□□□□ -1.31
USB1-216ENST00000624720 NRACQ8N912 160 aa6.86□□□□□ -1.31
USB1-216ENST00000624720 CUBNO60494 3623 aa6.86□□□□□ -1.31
USB1-216ENST00000624720 ZANQ9Y493 2812 aa6.86□□□□□ -1.31
USB1-216ENST00000624720 COX6CP09669 75 aa6.85□□□□□ -1.31
USB1-216ENST00000624720 BRWD1-AS2P59051 145 aa6.85□□□□□ -1.31
USB1-216ENST00000624720 C17orf58Q2M2W7 97 aa6.85□□□□□ -1.31
USB1-216ENST00000624720 TMEM263Q8WUH6 116 aaKnown RBP6.85□□□□□ -1.31
USB1-216ENST00000624720 SONP18583 2426 aaKnown RBP6.85□□□□□ -1.31
USB1-216ENST00000624720 TRIAP1O43715 76 aa6.85□□□□□ -1.31
USB1-216ENST00000624720 SAA2P0DJI9 122 aaPredicted RBP6.85□□□□□ -1.31
USB1-216ENST00000624720 ITLN2Q8WWU7 325 aaPredicted RBP6.85□□□□□ -1.31
USB1-216ENST00000624720 A0A0J9YY99 117 aa6.84□□□□□ -1.31
USB1-216ENST00000624720 IGHV3-48P01763 117 aa6.84□□□□□ -1.31
USB1-216ENST00000624720 DAND5Q8N907 189 aa6.84□□□□□ -1.31
USB1-216ENST00000624720 IGHV3OR16-10A0A075B7F0 116 aa6.84□□□□□ -1.31
USB1-216ENST00000624720 IGKV3D-7A0A0C4DH55 119 aa6.84□□□□□ -1.31
USB1-216ENST00000624720 ZNF73O43830 326 aaPredicted RBP6.84□□□□□ -1.31
USB1-216ENST00000624720 IGKV1-16P04430 117 aa6.84□□□□□ -1.31
USB1-216ENST00000624720 FAM222AQ5U5X8 452 aa6.84□□□□□ -1.31
USB1-216ENST00000624720 RAI1Q7Z5J4 1906 aaPredicted RBP6.84□□□□□ -1.32
USB1-216ENST00000624720 LYRM9A8MSI8 78 aa6.83□□□□□ -1.32
USB1-216ENST00000624720 E7EUB6 86 aa6.83□□□□□ -1.32
USB1-216ENST00000624720 VSIG2Q96IQ7 327 aa6.83□□□□□ -1.32
USB1-216ENST00000624720 MORN5Q5VZ52 161 aa6.83□□□□□ -1.32
USB1-216ENST00000624720 Q6JHZ5 121 aa6.83□□□□□ -1.32
USB1-216ENST00000624720 HECTD1Q9ULT8 2610 aa6.83□□□□□ -1.32
USB1-216ENST00000624720 TRBV6-6A0A0A6YYG2 114 aa6.83□□□□□ -1.32
USB1-216ENST00000624720 F8VRH5 84 aa6.83□□□□□ -1.32
USB1-216ENST00000624720 NDUFS5O43920 106 aa6.83□□□□□ -1.32
USB1-216ENST00000624720 CKS2P33552 79 aa6.83□□□□□ -1.32
USB1-216ENST00000624720 MAPK1IP1LQ8NDC0 245 aa6.83□□□□□ -1.32
USB1-216ENST00000624720 PSMG3-AS1Q96PY0 264 aa6.83□□□□□ -1.32
USB1-216ENST00000624720 UBE2L6O14933 153 aa6.82□□□□□ -1.32
USB1-216ENST00000624720 MLANAQ16655 118 aa6.82□□□□□ -1.32
USB1-216ENST00000624720 HELZ2Q9BYK8 2649 aaKnown RBP6.82□□□□□ -1.32
USB1-216ENST00000624720 FBN2P35556 2912 aa6.82□□□□□ -1.32
USB1-216ENST00000624720 TMEM223A0PJW6 202 aa6.82□□□□□ -1.32
USB1-216ENST00000624720 F8WEM9 126 aa6.82□□□□□ -1.32
USB1-216ENST00000624720 KLKP1Q107X0 134 aa6.82□□□□□ -1.32
USB1-216ENST00000624720 C10orf55Q5SWW7 151 aa6.82□□□□□ -1.32
USB1-216ENST00000624720 UBE2D4Q9Y2X8 147 aa6.82□□□□□ -1.32
USB1-216ENST00000624720 LINC00588Q9Y4M8 146 aa6.82□□□□□ -1.32
USB1-216ENST00000624720 TRAV8-3A0A0A6YYJ7 113 aa6.81□□□□□ -1.32
USB1-216ENST00000624720 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.81□□□□□ -1.32
USB1-216ENST00000624720 LST1O00453 97 aa6.81□□□□□ -1.32
USB1-216ENST00000624720 COX6B1P14854 86 aa6.81□□□□□ -1.32
USB1-216ENST00000624720 FAM229BQ4G0N7 80 aa6.81□□□□□ -1.32
USB1-216ENST00000624720 Q9H8V8 135 aa6.81□□□□□ -1.32
USB1-216ENST00000624720 SETD2Q9BYW2 2564 aaPredicted RBP6.81□□□□□ -1.32
USB1-216ENST00000624720 IGHV3-21A0A0B4J1V1 117 aa6.81□□□□□ -1.32
USB1-216ENST00000624720 IBA57-AS1B1ANH7 110 aa6.81□□□□□ -1.32
USB1-216ENST00000624720 ZNF329Q86UD4 541 aa6.81□□□□□ -1.32
USB1-216ENST00000624720 NAV3Q8IVL0 2385 aa6.8□□□□□ -1.32
USB1-216ENST00000624720 MRPL51Q4U2R6 128 aaKnown RBP6.8□□□□□ -1.32
USB1-216ENST00000624720 TMEM190Q8WZ59 177 aa6.8□□□□□ -1.32
USB1-216ENST00000624720 TRAV13-2A0A0B4J235 113 aa6.8□□□□□ -1.32
USB1-216ENST00000624720 LINC01546A6NGU7 62 aa6.8□□□□□ -1.32
USB1-216ENST00000624720 EIF4EBP3O60516 100 aaPredicted RBP6.8□□□□□ -1.32
USB1-216ENST00000624720 NXPH4O95158 308 aa6.8□□□□□ -1.32
USB1-216ENST00000624720 PRB4P10163 310 aaPredicted RBP6.8□□□□□ -1.32
USB1-216ENST00000624720 KLHL30-AS1Q8NEE0 82 aa6.8□□□□□ -1.32
USB1-216ENST00000624720 A0A087WZ39 114 aa6.79□□□□□ -1.32
USB1-216ENST00000624720 ADARB2-AS1A8MUL3 147 aa6.79□□□□□ -1.32
USB1-216ENST00000624720 EGR2P11161 476 aaPredicted RBP6.79□□□□□ -1.32
USB1-216ENST00000624720 ACANP16112 2415 aa6.79□□□□□ -1.32
USB1-216ENST00000624720 A8MUN3 132 aa6.79□□□□□ -1.32
USB1-216ENST00000624720 NDUFC1O43677 76 aa6.79□□□□□ -1.32
USB1-216ENST00000624720 Q6ZS46 218 aa6.79□□□□□ -1.32
USB1-216ENST00000624720 Q6ZVQ6 151 aa6.79□□□□□ -1.32
USB1-216ENST00000624720 FAM19A3Q7Z5A8 133 aa6.79□□□□□ -1.32
USB1-216ENST00000624720 ZNF843Q8N446 348 aa6.79□□□□□ -1.32
USB1-216ENST00000624720 SH2D1AO60880 128 aa6.79□□□□□ -1.32
USB1-216ENST00000624720 CLEC2BQ92478 149 aa6.79□□□□□ -1.32
USB1-216ENST00000624720 ICOSQ9Y6W8 199 aa6.79□□□□□ -1.32
USB1-216ENST00000624720 NBPF19A0A087WUL8 3843 aa6.78□□□□□ -1.32
USB1-216ENST00000624720 ANKRD17O75179 2603 aaKnown RBP6.78□□□□□ -1.32
USB1-216ENST00000624720 P0C879 139 aa6.78□□□□□ -1.32
USB1-216ENST00000624720 ZNF80P51504 273 aaPredicted RBP6.78□□□□□ -1.32
USB1-216ENST00000624720 PLGLAQ15195 96 aa6.78□□□□□ -1.32
USB1-216ENST00000624720 ESRGQ1W209 222 aa6.78□□□□□ -1.32
USB1-216ENST00000624720 MDFIQ99750 246 aa6.78□□□□□ -1.32
USB1-216ENST00000624720 TRAV12-1A0A0B4J245 112 aa6.78□□□□□ -1.32
USB1-216ENST00000624720 CGB3P0DN86 165 aa6.78□□□□□ -1.32
USB1-216ENST00000624720 CGB7P0DN87 165 aa6.78□□□□□ -1.32
USB1-216ENST00000624720 FBXL19-AS1Q494R0 122 aa6.78□□□□□ -1.32
USB1-216ENST00000624720 CREBBPQ92793 2442 aa6.78□□□□□ -1.32
USB1-216ENST00000624720 IGHV1-8P0DP01 117 aa6.77□□□□□ -1.33
USB1-216ENST00000624720 ZFP36P26651 326 aaKnown RBP6.77□□□□□ -1.33
USB1-216ENST00000624720 OVOL2Q9BRP0 275 aa6.77□□□□□ -1.33
USB1-216ENST00000624720 S4R3C0 116 aa6.77□□□□□ -1.33
USB1-216ENST00000624720 TENM4Q6N022 2769 aa6.76□□□□□ -1.33
USB1-216ENST00000624720 TRAV23DV6A0A075B6W5 121 aa6.76□□□□□ -1.33
USB1-216ENST00000624720 SAA1P0DJI8 122 aaPredicted RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms