RNA–Protein interactions for RNA: ENST00000622878.4

DDB2-216, Transcript of damage specific DNA binding protein 2, humanhuman

TSL 4

Gene DDB2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB2-216ENST00000622878 TRAV26-2A0A0B4J265 109 aa10.39□□□□□ -0.75
DDB2-216ENST00000622878 USP17L23D6RBM5 183 aa10.39□□□□□ -0.75
DDB2-216ENST00000622878 CT83Q5H943 113 aa10.39□□□□□ -0.75
DDB2-216ENST00000622878 DEFB104AQ8WTQ1 72 aa10.39□□□□□ -0.75
DDB2-216ENST00000622878 GFRA4Q9GZZ7 299 aa10.39□□□□□ -0.75
DDB2-216ENST00000622878 IGLV4-60A0A075B6I1 120 aa10.38□□□□□ -0.75
DDB2-216ENST00000622878 A8MWL6 223 aa10.38□□□□□ -0.75
DDB2-216ENST00000622878 HLA-DQA1P01909 254 aa10.38□□□□□ -0.75
DDB2-216ENST00000622878 CEBPGP53567 150 aa10.38□□□□□ -0.75
DDB2-216ENST00000622878 REG3AQ06141 175 aa10.38□□□□□ -0.75
DDB2-216ENST00000622878 SCXQ7RTU7 201 aa10.38□□□□□ -0.75
DDB2-216ENST00000622878 LINC01551Q86U37 167 aa10.38□□□□□ -0.75
DDB2-216ENST00000622878 EIF5A2Q9GZV4 153 aaKnown RBP10.38□□□□□ -0.75
DDB2-216ENST00000622878 PRSS1P07477 247 aa10.37□□□□□ -0.75
DDB2-216ENST00000622878 SRP19P09132 144 aaKnown RBP10.37□□□□□ -0.75
DDB2-216ENST00000622878 COTL1Q14019 142 aa10.37□□□□□ -0.75
DDB2-216ENST00000622878 RPL39LQ96EH5 51 aaKnown RBP10.37□□□□□ -0.75
DDB2-216ENST00000622878 SMIM7Q9BQ49 75 aa10.37□□□□□ -0.75
DDB2-216ENST00000622878 CHAC1Q9BUX1 264 aa10.37□□□□□ -0.75
DDB2-216ENST00000622878 TRAV8-4A0A0B4J246 113 aa10.35□□□□□ -0.75
DDB2-216ENST00000622878 AMTP48728 403 aa10.35□□□□□ -0.75
DDB2-216ENST00000622878 DGAT2L7PQ6IED9 249 aa10.35□□□□□ -0.75
DDB2-216ENST00000622878 TEX261Q6UWH6 196 aa10.35□□□□□ -0.75
DDB2-216ENST00000622878 SMIM15Q7Z3B0 74 aa10.35□□□□□ -0.75
DDB2-216ENST00000622878 LINC00528Q8N1L1 170 aa10.35□□□□□ -0.75
DDB2-216ENST00000622878 CIRBP-AS1Q8TBR5 109 aa10.35□□□□□ -0.75
DDB2-216ENST00000622878 IGLV10-54A0A075B6I4 117 aa10.34□□□□□ -0.75
DDB2-216ENST00000622878 ZNF727A8MUV8 499 aa10.34□□□□□ -0.75
DDB2-216ENST00000622878 TSKUQ8WUA8 353 aa10.34□□□□□ -0.75
DDB2-216ENST00000622878 OSTCQ9NRP0 149 aa10.34□□□□□ -0.75
DDB2-216ENST00000622878 TRBV6-5A0A0K0K1A5 114 aa10.33□□□□□ -0.76
DDB2-216ENST00000622878 FAM231BA6NCW3 169 aa10.33□□□□□ -0.76
DDB2-216ENST00000622878 UBE2L6O14933 153 aa10.33□□□□□ -0.76
DDB2-216ENST00000622878 NCR2O95944 276 aa10.33□□□□□ -0.76
DDB2-216ENST00000622878 C9orf163Q8N9P6 203 aa10.33□□□□□ -0.76
DDB2-216ENST00000622878 LRP1Q07954 4544 aaKnown RBP10.33□□□□□ -0.76
DDB2-216ENST00000622878 SDHAF1A6NFY7 115 aa10.32□□□□□ -0.76
DDB2-216ENST00000622878 HIGD1CA8MV81 97 aa10.32□□□□□ -0.76
DDB2-216ENST00000622878 GAS8-AS1O95177 125 aa10.32□□□□□ -0.76
DDB2-216ENST00000622878 CLRN3Q8NCR9 226 aa10.32□□□□□ -0.76
DDB2-216ENST00000622878 V9GYV3 84 aa10.32□□□□□ -0.76
DDB2-216ENST00000622878 PKHD1L1Q86WI1 4243 aa10.32□□□□□ -0.76
DDB2-216ENST00000622878 A0A1B0GUT8 65 aa10.31□□□□□ -0.76
DDB2-216ENST00000622878 C9JQL5 133 aa10.31□□□□□ -0.76
DDB2-216ENST00000622878 PLA2G1BP04054 148 aaKnown RBP10.31□□□□□ -0.76
DDB2-216ENST00000622878 KRTAP10-4P60372 401 aaPredicted RBP10.31□□□□□ -0.76
DDB2-216ENST00000622878 RNF185Q96GF1 192 aa10.31□□□□□ -0.76
DDB2-216ENST00000622878 TMEM191AQ9H0A3 160 aa10.31□□□□□ -0.76
DDB2-216ENST00000622878 FAT3Q8TDW7 4589 aa10.3□□□□□ -0.76
DDB2-216ENST00000622878 H7C423 109 aa10.3□□□□□ -0.76
DDB2-216ENST00000622878 ISOC2Q96AB3 205 aa10.3□□□□□ -0.76
DDB2-216ENST00000622878 I3L3M4 83 aa10.29□□□□□ -0.76
DDB2-216ENST00000622878 RAB4AP20338 218 aa10.29□□□□□ -0.76
DDB2-216ENST00000622878 CNBPP62633 177 aaKnown RBP10.29□□□□□ -0.76
DDB2-216ENST00000622878 TMEM241Q24JQ0 296 aa10.29□□□□□ -0.76
DDB2-216ENST00000622878 FAM74A3Q4VXF1 159 aa10.29□□□□□ -0.76
DDB2-216ENST00000622878 BORCS7Q96B45 105 aa10.29□□□□□ -0.76
DDB2-216ENST00000622878 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.28□□□□□ -0.76
DDB2-216ENST00000622878 IGKV2-29A2NJV5 120 aaPredicted RBP10.28□□□□□ -0.76
DDB2-216ENST00000622878 APCSP02743 223 aa10.28□□□□□ -0.76
DDB2-216ENST00000622878 SLPIP03973 132 aa10.28□□□□□ -0.76
DDB2-216ENST00000622878 RPL23P62829 140 aaKnown RBP10.28□□□□□ -0.76
DDB2-216ENST00000622878 SRSF3P84103 164 aaKnown RBP10.28□□□□□ -0.76
DDB2-216ENST00000622878 SDIM1Q6ZPB5 146 aa10.28□□□□□ -0.76
DDB2-216ENST00000622878 NUP35Q8NFH5 326 aa10.28□□□□□ -0.76
DDB2-216ENST00000622878 TSHBP01222 138 aa10.27□□□□□ -0.77
DDB2-216ENST00000622878 FGF6P10767 208 aa10.27□□□□□ -0.77
DDB2-216ENST00000622878 ESDP10768 282 aa10.27□□□□□ -0.77
DDB2-216ENST00000622878 RPS10P46783 165 aaKnown RBP10.27□□□□□ -0.77
DDB2-216ENST00000622878 POLR2KP53803 58 aaKnown RBP10.27□□□□□ -0.77
DDB2-216ENST00000622878 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.27□□□□□ -0.77
DDB2-216ENST00000622878 hDV102S1A0JD36 115 aa10.26□□□□□ -0.77
DDB2-216ENST00000622878 PANO1I0J062 215 aa10.26□□□□□ -0.77
DDB2-216ENST00000622878 PMCHP20382 165 aa10.26□□□□□ -0.77
DDB2-216ENST00000622878 AMN1Q8IY45 258 aa10.26□□□□□ -0.77
DDB2-216ENST00000622878 C15orf56Q8N910 161 aa10.26□□□□□ -0.77
DDB2-216ENST00000622878 MRAP2Q96G30 205 aa10.26□□□□□ -0.77
DDB2-216ENST00000622878 ST20Q9HBF5 79 aa10.26□□□□□ -0.77
DDB2-216ENST00000622878 TRBV27A0A0K0K1C4 114 aa10.25□□□□□ -0.77
DDB2-216ENST00000622878 GAGE12HA6NDE8 117 aa10.25□□□□□ -0.77
DDB2-216ENST00000622878 ZNF25P17030 456 aaPredicted RBP10.25□□□□□ -0.77
DDB2-216ENST00000622878 AMMECR1LQ6DCA0 310 aa10.25□□□□□ -0.77
DDB2-216ENST00000622878 RNASEKQ6P5S7 137 aaKnown RBP10.25□□□□□ -0.77
DDB2-216ENST00000622878 NAT8Q9UHE5 227 aa10.25□□□□□ -0.77
DDB2-216ENST00000622878 RIGQ13278 110 aa10.24□□□□□ -0.77
DDB2-216ENST00000622878 CIRBPQ14011 172 aaKnown RBP10.24□□□□□ -0.77
DDB2-216ENST00000622878 CHCHD10Q8WYQ3 142 aaPredicted RBP10.24□□□□□ -0.77
DDB2-216ENST00000622878 SMDT1Q9H4I9 107 aa10.24□□□□□ -0.77
DDB2-216ENST00000622878 TMEM242Q9NWH2 141 aa10.24□□□□□ -0.77
DDB2-216ENST00000622878 NAT8BQ9UHF3 227 aa10.24□□□□□ -0.77
DDB2-216ENST00000622878 IGKV3OR2-268A0A0C4DH90 116 aa10.23□□□□□ -0.77
DDB2-216ENST00000622878 SMIM27A0A1W2PRY6 76 aa10.23□□□□□ -0.77
DDB2-216ENST00000622878 PEA15Q15121 130 aa10.23□□□□□ -0.77
DDB2-216ENST00000622878 ADIRFQ15847 76 aa10.23□□□□□ -0.77
DDB2-216ENST00000622878 NRACQ8N912 160 aa10.23□□□□□ -0.77
DDB2-216ENST00000622878 SMKR1H3BMG3 65 aa10.22□□□□□ -0.77
DDB2-216ENST00000622878 MRPL52Q86TS9 123 aaKnown RBP10.22□□□□□ -0.77
DDB2-216ENST00000622878 OR5A1Q8NGJ0 315 aa10.22□□□□□ -0.77
DDB2-216ENST00000622878 KRTAP29-1A8MX34 341 aaPredicted RBP10.21□□□□□ -0.77
DDB2-216ENST00000622878 FOXI1Q12951 378 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms