RNA–Protein interactions for RNA: ENST00000622755.4

CBWD3-218, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,413 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-218ENST00000622755 ISOC2Q96AB3 205 aa8.2□□□□□ -1.1
CBWD3-218ENST00000622755 NAT8BQ9UHF3 227 aa8.2□□□□□ -1.1
CBWD3-218ENST00000622755 PKHD1P08F94 4074 aa8.2□□□□□ -1.1
CBWD3-218ENST00000622755 LECT2O14960 151 aa8.2□□□□□ -1.1
CBWD3-218ENST00000622755 PPP1R17O96001 155 aa8.2□□□□□ -1.1
CBWD3-218ENST00000622755 PMCHP20382 165 aa8.2□□□□□ -1.1
CBWD3-218ENST00000622755 RPL23P62829 140 aaKnown RBP8.2□□□□□ -1.1
CBWD3-218ENST00000622755 RBX1P62877 108 aa8.2□□□□□ -1.1
CBWD3-218ENST00000622755 AMMECR1LQ6DCA0 310 aa8.2□□□□□ -1.1
CBWD3-218ENST00000622755 GATD1Q8NB37 220 aa8.2□□□□□ -1.1
CBWD3-218ENST00000622755 BAALCQ8WXS3 180 aa8.2□□□□□ -1.1
CBWD3-218ENST00000622755 TMEM191AQ9H0A3 160 aa8.2□□□□□ -1.1
CBWD3-218ENST00000622755 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.19□□□□□ -1.1
CBWD3-218ENST00000622755 TRAV26-2A0A0B4J265 109 aa8.19□□□□□ -1.1
CBWD3-218ENST00000622755 HLA-DQA1P01909 254 aa8.19□□□□□ -1.1
CBWD3-218ENST00000622755 APCSP02743 223 aa8.19□□□□□ -1.1
CBWD3-218ENST00000622755 S100A8P05109 93 aa8.19□□□□□ -1.1
CBWD3-218ENST00000622755 FUSP35637 526 aaKnown RBP eCLIP8.19□□□□□ -1.1
CBWD3-218ENST00000622755 LINC00269Q8N2A0 174 aa8.19□□□□□ -1.1
CBWD3-218ENST00000622755 MRAP2Q96G30 205 aa8.19□□□□□ -1.1
CBWD3-218ENST00000622755 ST20Q9HBF5 79 aa8.19□□□□□ -1.1
CBWD3-218ENST00000622755 TRAV8-4A0A0B4J246 113 aa8.18□□□□□ -1.1
CBWD3-218ENST00000622755 A0A1B0GUV1 79 aa8.18□□□□□ -1.1
CBWD3-218ENST00000622755 A0A1B0GW15 77 aa8.18□□□□□ -1.1
CBWD3-218ENST00000622755 I3L3M4 83 aa8.18□□□□□ -1.1
CBWD3-218ENST00000622755 REG3AQ06141 175 aa8.18□□□□□ -1.1
CBWD3-218ENST00000622755 BTF3L4Q96K17 158 aa8.18□□□□□ -1.1
CBWD3-218ENST00000622755 TMEM70Q9BUB7 260 aa8.18□□□□□ -1.1
CBWD3-218ENST00000622755 V9GYV3 84 aa8.18□□□□□ -1.1
CBWD3-218ENST00000622755 SDHAF1A6NFY7 115 aa8.17□□□□□ -1.1
CBWD3-218ENST00000622755 H7C423 109 aa8.17□□□□□ -1.1
CBWD3-218ENST00000622755 SMAGPQ0VAQ4 97 aa8.17□□□□□ -1.1
CBWD3-218ENST00000622755 CLPSL2Q6UWE3 100 aa8.17□□□□□ -1.1
CBWD3-218ENST00000622755 ENHOQ6UWT2 76 aa8.17□□□□□ -1.1
CBWD3-218ENST00000622755 PPP1R2P9O14990 202 aa8.16□□□□□ -1.1
CBWD3-218ENST00000622755 RNASEKQ6P5S7 137 aaKnown RBP8.16□□□□□ -1.1
CBWD3-218ENST00000622755 Q8N1X5 172 aa8.16□□□□□ -1.1
CBWD3-218ENST00000622755 NUP35Q8NFH5 326 aa8.16□□□□□ -1.1
CBWD3-218ENST00000622755 RPL39LQ96EH5 51 aaKnown RBP8.16□□□□□ -1.1
CBWD3-218ENST00000622755 TMEM101Q96IK0 257 aa8.16□□□□□ -1.1
CBWD3-218ENST00000622755 PRR34Q9NV39 138 aa8.16□□□□□ -1.1
CBWD3-218ENST00000622755 TRBV6-5A0A0K0K1A5 114 aa8.15□□□□□ -1.1
CBWD3-218ENST00000622755 F8W036 122 aa8.15□□□□□ -1.1
CBWD3-218ENST00000622755 KRTAP10-1P60331 282 aa8.15□□□□□ -1.1
CBWD3-218ENST00000622755 PNRC1Q12796 327 aaPredicted RBP8.15□□□□□ -1.1
CBWD3-218ENST00000622755 DNAH11Q96DT5 4516 aa8.14□□□□□ -1.11
CBWD3-218ENST00000622755 EPM2AB3EWF7 344 aa8.14□□□□□ -1.11
CBWD3-218ENST00000622755 ZNF25P17030 456 aaPredicted RBP8.14□□□□□ -1.11
CBWD3-218ENST00000622755 FCER1GP30273 86 aa8.14□□□□□ -1.11
CBWD3-218ENST00000622755 SRSF3P84103 164 aaKnown RBP8.14□□□□□ -1.11
CBWD3-218ENST00000622755 AMN1Q8IY45 258 aa8.14□□□□□ -1.11
CBWD3-218ENST00000622755 SMIM27A0A1W2PRY6 76 aa8.13□□□□□ -1.11
CBWD3-218ENST00000622755 C9JQL5 133 aa8.13□□□□□ -1.11
CBWD3-218ENST00000622755 RAB4AP20338 218 aa8.13□□□□□ -1.11
CBWD3-218ENST00000622755 CAMPP49913 170 aa8.13□□□□□ -1.11
CBWD3-218ENST00000622755 DEFB104AQ8WTQ1 72 aa8.13□□□□□ -1.11
CBWD3-218ENST00000622755 KIR2DL4Q99706 377 aa8.13□□□□□ -1.11
CBWD3-218ENST00000622755 IGLV10-54A0A075B6I4 117 aa8.12□□□□□ -1.11
CBWD3-218ENST00000622755 LINC00862A6NCI5 91 aa8.12□□□□□ -1.11
CBWD3-218ENST00000622755 USP17L23D6RBM5 183 aa8.12□□□□□ -1.11
CBWD3-218ENST00000622755 FAM229AH3BQW9 127 aa8.12□□□□□ -1.11
CBWD3-218ENST00000622755 VCYO14598 125 aa8.12□□□□□ -1.11
CBWD3-218ENST00000622755 WFDC2Q14508 124 aa8.12□□□□□ -1.11
CBWD3-218ENST00000622755 C20orf203Q8NBC4 194 aa8.12□□□□□ -1.11
CBWD3-218ENST00000622755 AP5S1Q9NUS5 200 aa8.12□□□□□ -1.11
CBWD3-218ENST00000622755 KIAA1109Q2LD37 5005 aa8.12□□□□□ -1.11
CBWD3-218ENST00000622755 DYNC1H1Q14204 4646 aaKnown RBP8.12□□□□□ -1.11
CBWD3-218ENST00000622755 IGLV4-60A0A075B6I1 120 aa8.12□□□□□ -1.11
CBWD3-218ENST00000622755 IGKV3OR2-268A0A0C4DH90 116 aa8.12□□□□□ -1.11
CBWD3-218ENST00000622755 TCAPO15273 167 aa8.12□□□□□ -1.11
CBWD3-218ENST00000622755 MT-ND4LP03901 98 aa8.12□□□□□ -1.11
CBWD3-218ENST00000622755 CKS2P33552 79 aa8.12□□□□□ -1.11
CBWD3-218ENST00000622755 HBBP68871 147 aa8.12□□□□□ -1.11
CBWD3-218ENST00000622755 DGAT2L7PQ6IED9 249 aa8.12□□□□□ -1.11
CBWD3-218ENST00000622755 CFAP161Q6P656 301 aa8.12□□□□□ -1.11
CBWD3-218ENST00000622755 TMEM18Q96B42 140 aa8.12□□□□□ -1.11
CBWD3-218ENST00000622755 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.11□□□□□ -1.11
CBWD3-218ENST00000622755 IGKV2-29A2NJV5 120 aaPredicted RBP8.11□□□□□ -1.11
CBWD3-218ENST00000622755 C7orf77A4D0Y5 90 aa8.11□□□□□ -1.11
CBWD3-218ENST00000622755 FGF6P10767 208 aa8.11□□□□□ -1.11
CBWD3-218ENST00000622755 SUMO2P61956 95 aaKnown RBP8.11□□□□□ -1.11
CBWD3-218ENST00000622755 FAM104BQ5XKR9 115 aa8.11□□□□□ -1.11
CBWD3-218ENST00000622755 OR5A1Q8NGJ0 315 aa8.11□□□□□ -1.11
CBWD3-218ENST00000622755 RNF185Q96GF1 192 aa8.11□□□□□ -1.11
CBWD3-218ENST00000622755 TMEM242Q9NWH2 141 aa8.11□□□□□ -1.11
CBWD3-218ENST00000622755 HERC2O95714 4834 aa8.1□□□□□ -1.11
CBWD3-218ENST00000622755 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.1□□□□□ -1.11
CBWD3-218ENST00000622755 TRBV27A0A0K0K1C4 114 aa8.1□□□□□ -1.11
CBWD3-218ENST00000622755 XGP55808 180 aa8.1□□□□□ -1.11
CBWD3-218ENST00000622755 CLLU1Q5K131 121 aa8.1□□□□□ -1.11
CBWD3-218ENST00000622755 MRPL54Q6P161 138 aaKnown RBP8.1□□□□□ -1.11
CBWD3-218ENST00000622755 ATP5L2Q7Z4Y8 100 aa8.1□□□□□ -1.11
CBWD3-218ENST00000622755 PPBPP02775 128 aa8.09□□□□□ -1.11
CBWD3-218ENST00000622755 C20orf78Q9BR46 151 aa8.09□□□□□ -1.11
CBWD3-218ENST00000622755 hDV102S1A0JD36 115 aa8.08□□□□□ -1.12
CBWD3-218ENST00000622755 POLR2KP53803 58 aaKnown RBP8.08□□□□□ -1.12
CBWD3-218ENST00000622755 MRPL51Q4U2R6 128 aaKnown RBP8.08□□□□□ -1.12
CBWD3-218ENST00000622755 SMKR1H3BMG3 65 aa8.07□□□□□ -1.12
CBWD3-218ENST00000622755 TSHBP01222 138 aa8.07□□□□□ -1.12
CBWD3-218ENST00000622755 RPS10P46783 165 aaKnown RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms