RNA–Protein interactions for RNA: ENST00000622533.4

CHD1L-210, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5

Gene CHD1L, Length 2,937 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-210ENST00000622533 M0R2P5 195 aa9.66□□□□□ -0.86
CHD1L-210ENST00000622533 IGHV3-11P01762 117 aa9.66□□□□□ -0.86
CHD1L-210ENST00000622533 FAM236AA0A1B0GUQ0 79 aa9.66□□□□□ -0.86
CHD1L-210ENST00000622533 FAM236BA0A1B0GV22 79 aa9.66□□□□□ -0.86
CHD1L-210ENST00000622533 SPXQ9BT56 116 aa9.66□□□□□ -0.86
CHD1L-210ENST00000622533 YAE1D1Q9NRH1 226 aa9.66□□□□□ -0.86
CHD1L-210ENST00000622533 IGHV3OR16-10A0A075B7F0 116 aa9.66□□□□□ -0.86
CHD1L-210ENST00000622533 A6NDX4 124 aa9.66□□□□□ -0.86
CHD1L-210ENST00000622533 RHOHQ15669 191 aa9.66□□□□□ -0.86
CHD1L-210ENST00000622533 ADAMTSL4-AS1Q5T5F5 129 aa9.66□□□□□ -0.86
CHD1L-210ENST00000622533 PIMREGQ9BSJ6 248 aa9.66□□□□□ -0.86
CHD1L-210ENST00000622533 TRGV11A0A075B6L2 103 aa9.65□□□□□ -0.86
CHD1L-210ENST00000622533 IGLV1-40P01703 118 aa9.65□□□□□ -0.86
CHD1L-210ENST00000622533 LINC00694P0DN24 101 aa9.65□□□□□ -0.86
CHD1L-210ENST00000622533 BRD3OSQ6XYD6 125 aa9.65□□□□□ -0.86
CHD1L-210ENST00000622533 ZNF462Q96JM2 2506 aa9.65□□□□□ -0.87
CHD1L-210ENST00000622533 PTPN13Q12923 2485 aa9.64□□□□□ -0.87
CHD1L-210ENST00000622533 TRAV8-3A0A0A6YYJ7 113 aa9.64□□□□□ -0.87
CHD1L-210ENST00000622533 LOC107984640A0A0U1RRK4 108 aa9.64□□□□□ -0.87
CHD1L-210ENST00000622533 LY6EQ16553 131 aa9.64□□□□□ -0.87
CHD1L-210ENST00000622533 NSUN5P1Q3KNT7 163 aa9.64□□□□□ -0.87
CHD1L-210ENST00000622533 A8MZ25 164 aa9.63□□□□□ -0.87
CHD1L-210ENST00000622533 CCDC168Q8NDH2 2452 aa9.63□□□□□ -0.87
CHD1L-210ENST00000622533 C9orf85Q96MD7 179 aa9.63□□□□□ -0.87
CHD1L-210ENST00000622533 H3BUX3 64 aa9.63□□□□□ -0.87
CHD1L-210ENST00000622533 DCANP1Q8TF63 244 aa9.63□□□□□ -0.87
CHD1L-210ENST00000622533 LINC01600Q96MT4 127 aa9.63□□□□□ -0.87
CHD1L-210ENST00000622533 TMEM126AQ9H061 195 aa9.63□□□□□ -0.87
CHD1L-210ENST00000622533 IGHV3-30-3P0DP02 117 aa9.62□□□□□ -0.87
CHD1L-210ENST00000622533 LITAFQ99732 161 aa9.62□□□□□ -0.87
CHD1L-210ENST00000622533 KLK5Q9Y337 293 aaPredicted RBP9.62□□□□□ -0.87
CHD1L-210ENST00000622533 TRAV12-3A0A0B4J271 114 aa9.62□□□□□ -0.87
CHD1L-210ENST00000622533 RNASE13Q5GAN3 156 aaKnown RBP9.62□□□□□ -0.87
CHD1L-210ENST00000622533 IGHV3-16A0A0C4DH30 117 aa9.61□□□□□ -0.87
CHD1L-210ENST00000622533 TRBV7-7A0A0K0K1E9 115 aa9.61□□□□□ -0.87
CHD1L-210ENST00000622533 H3BT86 120 aa9.61□□□□□ -0.87
CHD1L-210ENST00000622533 I3L3M4 83 aa9.61□□□□□ -0.87
CHD1L-210ENST00000622533 COX6CP09669 75 aa9.61□□□□□ -0.87
CHD1L-210ENST00000622533 SNRPD3P62318 126 aaKnown RBP9.61□□□□□ -0.87
CHD1L-210ENST00000622533 MRPL23Q16540 153 aaKnown RBP9.61□□□□□ -0.87
CHD1L-210ENST00000622533 SPANXA1Q9NS26 97 aa9.61□□□□□ -0.87
CHD1L-210ENST00000622533 CFHR3Q02985 330 aa9.61□□□□□ -0.87
CHD1L-210ENST00000622533 C9orf153Q5TBE3 101 aa9.61□□□□□ -0.87
CHD1L-210ENST00000622533 DAND5Q8N907 189 aa9.61□□□□□ -0.87
CHD1L-210ENST00000622533 TMEM101Q96IK0 257 aa9.61□□□□□ -0.87
CHD1L-210ENST00000622533 DOPEY2Q9Y3R5 2298 aa9.61□□□□□ -0.87
CHD1L-210ENST00000622533 DUX5Q96PT3 197 aa9.6□□□□□ -0.87
CHD1L-210ENST00000622533 NOTCH2Q04721 2471 aa9.6□□□□□ -0.87
CHD1L-210ENST00000622533 M0QY20 66 aa9.6□□□□□ -0.87
CHD1L-210ENST00000622533 IGHV4-38-2P0DP08 117 aa9.6□□□□□ -0.87
CHD1L-210ENST00000622533 LST1O00453 97 aa9.59□□□□□ -0.87
CHD1L-210ENST00000622533 BLCAPP62952 87 aa9.59□□□□□ -0.87
CHD1L-210ENST00000622533 SMCR5Q8TEV8 140 aa9.59□□□□□ -0.87
CHD1L-210ENST00000622533 TIMM21Q9BVV7 248 aa9.59□□□□□ -0.87
CHD1L-210ENST00000622533 IGHV4-61A0A0C4DH41 118 aa9.59□□□□□ -0.87
CHD1L-210ENST00000622533 ATP5J2P56134 94 aa9.59□□□□□ -0.87
CHD1L-210ENST00000622533 IGLV4-3A0A075B6K6 122 aa9.59□□□□□ -0.87
CHD1L-210ENST00000622533 A0A0J9YX75 114 aa9.59□□□□□ -0.87
CHD1L-210ENST00000622533 FAM240AA0A1B0GVK7 77 aa9.59□□□□□ -0.87
CHD1L-210ENST00000622533 TMEM89A2RUT3 159 aa9.59□□□□□ -0.87
CHD1L-210ENST00000622533 C10orf105Q8TEF2 133 aa9.59□□□□□ -0.87
CHD1L-210ENST00000622533 SONP18583 2426 aaKnown RBP9.58□□□□□ -0.88
CHD1L-210ENST00000622533 CREBBPQ92793 2442 aa9.58□□□□□ -0.88
CHD1L-210ENST00000622533 IGHV1OR15-1A0A075B7D0 117 aa9.58□□□□□ -0.88
CHD1L-210ENST00000622533 CSDC2Q9Y534 153 aaKnown RBP9.58□□□□□ -0.88
CHD1L-210ENST00000622533 DEFB121Q5J5C9 76 aa9.58□□□□□ -0.88
CHD1L-210ENST00000622533 C20orf203Q8NBC4 194 aa9.58□□□□□ -0.88
CHD1L-210ENST00000622533 NDUFA12Q9UI09 145 aa9.58□□□□□ -0.88
CHD1L-210ENST00000622533 NRGNQ92686 78 aa9.57□□□□□ -0.88
CHD1L-210ENST00000622533 NDUFA7O95182 113 aa9.56□□□□□ -0.88
CHD1L-210ENST00000622533 HERVK_113P63121 156 aa9.56□□□□□ -0.88
CHD1L-210ENST00000622533 C3orf22Q8N5N4 141 aa9.56□□□□□ -0.88
CHD1L-210ENST00000622533 MSMBP08118 114 aa9.56□□□□□ -0.88
CHD1L-210ENST00000622533 PSMB8P28062 276 aa9.56□□□□□ -0.88
CHD1L-210ENST00000622533 RNF152Q8N8N0 203 aa9.56□□□□□ -0.88
CHD1L-210ENST00000622533 CCL19Q99731 98 aa9.56□□□□□ -0.88
CHD1L-210ENST00000622533 EDA2RQ9HAV5 297 aa9.56□□□□□ -0.88
CHD1L-210ENST00000622533 IGKV3-20P01619 116 aa9.55□□□□□ -0.88
CHD1L-210ENST00000622533 SORL1Q92673 2214 aa9.55□□□□□ -0.88
CHD1L-210ENST00000622533 C19orf84I3L1E1 186 aa9.55□□□□□ -0.88
CHD1L-210ENST00000622533 K7EQG2 157 aa9.55□□□□□ -0.88
CHD1L-210ENST00000622533 CD28P10747 220 aa9.55□□□□□ -0.88
CHD1L-210ENST00000622533 MIAQ16674 131 aa9.55□□□□□ -0.88
CHD1L-210ENST00000622533 TMEM61Q8N0U2 210 aa9.55□□□□□ -0.88
CHD1L-210ENST00000622533 DNAJC30Q96LL9 226 aa9.55□□□□□ -0.88
CHD1L-210ENST00000622533 PYGO1Q9Y3Y4 419 aa9.55□□□□□ -0.88
CHD1L-210ENST00000622533 TRAV12-2A0A075B6T6 113 aa9.55□□□□□ -0.88
CHD1L-210ENST00000622533 EDN2P20800 178 aa9.54□□□□□ -0.88
CHD1L-210ENST00000622533 A0A0U1RRA0 63 aa9.54□□□□□ -0.88
CHD1L-210ENST00000622533 FAM104AQ969W3 186 aa9.53□□□□□ -0.88
CHD1L-210ENST00000622533 SPANXDQ9BXN6 97 aa9.53□□□□□ -0.88
CHD1L-210ENST00000622533 SPANXCQ9NY87 97 aa9.53□□□□□ -0.88
CHD1L-210ENST00000622533 IGHV3-73A0A0B4J1V6 119 aa9.53□□□□□ -0.88
CHD1L-210ENST00000622533 IGHV1-58A0A0C4DH39 117 aa9.52□□□□□ -0.88
CHD1L-210ENST00000622533 SPINK13Q1W4C9 94 aa9.52□□□□□ -0.89
CHD1L-210ENST00000622533 CITED2Q99967 270 aaPredicted RBP9.52□□□□□ -0.89
CHD1L-210ENST00000622533 NOTCH3Q9UM47 2321 aa9.52□□□□□ -0.89
CHD1L-210ENST00000622533 B4DSR2 109 aa9.52□□□□□ -0.89
CHD1L-210ENST00000622533 UQCRQO14949 82 aa9.52□□□□□ -0.89
CHD1L-210ENST00000622533 FAM19A5Q7Z5A7 132 aaPredicted RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 136.1 ms