RNA–Protein interactions for RNA: ENST00000621757.1

COL8A1-208, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-208ENST00000621757 IGKV2D-24A0A075B6R9 120 aa7.99□□□□□ -1.13
COL8A1-208ENST00000621757 TRBV6-5A0A0K0K1A5 114 aa7.99□□□□□ -1.13
COL8A1-208ENST00000621757 SMKR1H3BMG3 65 aa7.99□□□□□ -1.13
COL8A1-208ENST00000621757 NCR2O95944 276 aa7.99□□□□□ -1.13
COL8A1-208ENST00000621757 ADCYAP1P18509 176 aa7.99□□□□□ -1.13
COL8A1-208ENST00000621757 RPS10P46783 165 aaKnown RBP7.99□□□□□ -1.13
COL8A1-208ENST00000621757 CAMPP49913 170 aa7.99□□□□□ -1.13
COL8A1-208ENST00000621757 WFDC2Q14508 124 aa7.99□□□□□ -1.13
COL8A1-208ENST00000621757 CDPF1Q6NVV7 123 aa7.99□□□□□ -1.13
COL8A1-208ENST00000621757 MRPL54Q6P161 138 aaKnown RBP7.99□□□□□ -1.13
COL8A1-208ENST00000621757 CLPSL2Q6UWE3 100 aa7.99□□□□□ -1.13
COL8A1-208ENST00000621757 ENHOQ6UWT2 76 aa7.99□□□□□ -1.13
COL8A1-208ENST00000621757 APOBP04114 4563 aaKnown RBP7.98□□□□□ -1.13
COL8A1-208ENST00000621757 A0A1B0GW15 77 aa7.98□□□□□ -1.13
COL8A1-208ENST00000621757 PPP1R2P9O14990 202 aa7.98□□□□□ -1.13
COL8A1-208ENST00000621757 Q0VG73 95 aa7.98□□□□□ -1.13
COL8A1-208ENST00000621757 UQCC3Q6UW78 93 aa7.98□□□□□ -1.13
COL8A1-208ENST00000621757 Q8N814 137 aa7.98□□□□□ -1.13
COL8A1-208ENST00000621757 MAPKAPK5-AS1Q8N8E1 139 aa7.98□□□□□ -1.13
COL8A1-208ENST00000621757 ST20Q9HBF5 79 aa7.98□□□□□ -1.13
COL8A1-208ENST00000621757 PGPEP1Q9NXJ5 209 aa7.98□□□□□ -1.13
COL8A1-208ENST00000621757 COX11Q9Y6N1 276 aa7.98□□□□□ -1.13
COL8A1-208ENST00000621757 A0A1B0GXF2 115 aa7.97□□□□□ -1.13
COL8A1-208ENST00000621757 UBE2L6O14933 153 aa7.97□□□□□ -1.13
COL8A1-208ENST00000621757 LECT2O14960 151 aa7.97□□□□□ -1.13
COL8A1-208ENST00000621757 APCSP02743 223 aa7.97□□□□□ -1.13
COL8A1-208ENST00000621757 HBBP68871 147 aa7.97□□□□□ -1.13
COL8A1-208ENST00000621757 FAM104BQ5XKR9 115 aa7.97□□□□□ -1.13
COL8A1-208ENST00000621757 COMMD7Q86VX2 200 aa7.97□□□□□ -1.13
COL8A1-208ENST00000621757 LINC00269Q8N2A0 174 aa7.97□□□□□ -1.13
COL8A1-208ENST00000621757 C20orf203Q8NBC4 194 aa7.97□□□□□ -1.13
COL8A1-208ENST00000621757 TMEM70Q9BUB7 260 aa7.97□□□□□ -1.13
COL8A1-208ENST00000621757 C1orf43Q9BWL3 253 aa7.97□□□□□ -1.13
COL8A1-208ENST00000621757 PRR34Q9NV39 138 aa7.97□□□□□ -1.13
COL8A1-208ENST00000621757 HSPG2P98160 4391 aa7.97□□□□□ -1.13
COL8A1-208ENST00000621757 IGLV4-60A0A075B6I1 120 aa7.96□□□□□ -1.14
COL8A1-208ENST00000621757 I3L3M4 83 aa7.96□□□□□ -1.14
COL8A1-208ENST00000621757 MT-ND4LP03901 98 aa7.96□□□□□ -1.14
COL8A1-208ENST00000621757 MIAQ16674 131 aa7.96□□□□□ -1.14
COL8A1-208ENST00000621757 MRPL51Q4U2R6 128 aaKnown RBP7.96□□□□□ -1.14
COL8A1-208ENST00000621757 NRACQ8N912 160 aa7.96□□□□□ -1.14
COL8A1-208ENST00000621757 BAALCQ8WXS3 180 aa7.96□□□□□ -1.14
COL8A1-208ENST00000621757 ANAPC16Q96DE5 110 aa7.96□□□□□ -1.14
COL8A1-208ENST00000621757 TMEM242Q9NWH2 141 aa7.96□□□□□ -1.14
COL8A1-208ENST00000621757 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.95□□□□□ -1.14
COL8A1-208ENST00000621757 A0A1B0GUV1 79 aa7.95□□□□□ -1.14
COL8A1-208ENST00000621757 IGKV2-29A2NJV5 120 aaPredicted RBP7.95□□□□□ -1.14
COL8A1-208ENST00000621757 TMEM218A2RU14 115 aa7.95□□□□□ -1.14
COL8A1-208ENST00000621757 TSHBP01222 138 aa7.95□□□□□ -1.14
COL8A1-208ENST00000621757 S100A8P05109 93 aa7.95□□□□□ -1.14
COL8A1-208ENST00000621757 PMCHP20382 165 aa7.95□□□□□ -1.14
COL8A1-208ENST00000621757 NTN5Q8WTR8 489 aaPredicted RBP7.95□□□□□ -1.14
COL8A1-208ENST00000621757 IGLV5-52A0A0A0MRZ9 124 aa7.94□□□□□ -1.14
COL8A1-208ENST00000621757 TRBV27A0A0K0K1C4 114 aa7.94□□□□□ -1.14
COL8A1-208ENST00000621757 F8W036 122 aa7.94□□□□□ -1.14
COL8A1-208ENST00000621757 CDK2AP2O75956 126 aa7.94□□□□□ -1.14
COL8A1-208ENST00000621757 POLR2KP53803 58 aaKnown RBP7.94□□□□□ -1.14
COL8A1-208ENST00000621757 REG3AQ06141 175 aa7.94□□□□□ -1.14
COL8A1-208ENST00000621757 ATP5L2Q7Z4Y8 100 aa7.94□□□□□ -1.14
COL8A1-208ENST00000621757 PPP1R17O96001 155 aa7.93□□□□□ -1.14
COL8A1-208ENST00000621757 HLA-DQA1P01909 254 aa7.93□□□□□ -1.14
COL8A1-208ENST00000621757 SUMO2P61956 95 aaKnown RBP7.93□□□□□ -1.14
COL8A1-208ENST00000621757 AMMECR1LQ6DCA0 310 aa7.93□□□□□ -1.14
COL8A1-208ENST00000621757 IGLV10-54A0A075B6I4 117 aa7.92□□□□□ -1.14
COL8A1-208ENST00000621757 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.92□□□□□ -1.14
COL8A1-208ENST00000621757 LINC00862A6NCI5 91 aa7.92□□□□□ -1.14
COL8A1-208ENST00000621757 D6R8Y8 96 aa7.92□□□□□ -1.14
COL8A1-208ENST00000621757 H7C423 109 aa7.92□□□□□ -1.14
COL8A1-208ENST00000621757 FGF6P10767 208 aa7.92□□□□□ -1.14
COL8A1-208ENST00000621757 ESDP10768 282 aa7.92□□□□□ -1.14
COL8A1-208ENST00000621757 GCSHP23434 173 aa7.92□□□□□ -1.14
COL8A1-208ENST00000621757 CKS2P33552 79 aa7.92□□□□□ -1.14
COL8A1-208ENST00000621757 KRTAP10-1P60331 282 aa7.92□□□□□ -1.14
COL8A1-208ENST00000621757 SEC11CQ9BY50 192 aa7.92□□□□□ -1.14
COL8A1-208ENST00000621757 VCYO14598 125 aa7.91□□□□□ -1.14
COL8A1-208ENST00000621757 RNASEKQ6P5S7 137 aaKnown RBP7.91□□□□□ -1.14
COL8A1-208ENST00000621757 KRTAP26-1Q6PEX3 210 aa7.91□□□□□ -1.14
COL8A1-208ENST00000621757 TRBV24-1A0A075B6N3 115 aa7.9□□□□□ -1.14
COL8A1-208ENST00000621757 IGKV3OR2-268A0A0C4DH90 116 aa7.9□□□□□ -1.14
COL8A1-208ENST00000621757 C7orf77A4D0Y5 90 aa7.9□□□□□ -1.14
COL8A1-208ENST00000621757 TNFRSF6BO95407 300 aa7.9□□□□□ -1.14
COL8A1-208ENST00000621757 NPYP01303 97 aa7.9□□□□□ -1.14
COL8A1-208ENST00000621757 ZNF25P17030 456 aaPredicted RBP7.9□□□□□ -1.14
COL8A1-208ENST00000621757 FCER1GP30273 86 aa7.9□□□□□ -1.14
COL8A1-208ENST00000621757 BTF3L4Q96K17 158 aa7.9□□□□□ -1.14
COL8A1-208ENST00000621757 KIR2DL4Q99706 377 aa7.9□□□□□ -1.14
COL8A1-208ENST00000621757 C20orf78Q9BR46 151 aa7.9□□□□□ -1.14
COL8A1-208ENST00000621757 TRAV8-4A0A0B4J246 113 aa7.89□□□□□ -1.15
COL8A1-208ENST00000621757 USP17L23D6RBM5 183 aa7.89□□□□□ -1.15
COL8A1-208ENST00000621757 PPBPP02775 128 aa7.89□□□□□ -1.15
COL8A1-208ENST00000621757 ORMDL3Q8N138 153 aa7.89□□□□□ -1.15
COL8A1-208ENST00000621757 SMIM2Q9BVW6 85 aa7.89□□□□□ -1.15
COL8A1-208ENST00000621757 PHOX2AO14813 284 aa7.88□□□□□ -1.15
COL8A1-208ENST00000621757 RPL32P62910 135 aaKnown RBP7.88□□□□□ -1.15
COL8A1-208ENST00000621757 C14orf177Q52M58 125 aa7.88□□□□□ -1.15
COL8A1-208ENST00000621757 C10orf91Q5T1B1 145 aa7.88□□□□□ -1.15
COL8A1-208ENST00000621757 MRPL52Q86TS9 123 aaKnown RBP7.88□□□□□ -1.15
COL8A1-208ENST00000621757 OR5A1Q8NGJ0 315 aa7.88□□□□□ -1.15
COL8A1-208ENST00000621757 TMEM101Q96IK0 257 aa7.88□□□□□ -1.15
COL8A1-208ENST00000621757 IMMP2LQ96T52 175 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms