RNA–Protein interactions for RNA: ENST00000621562.1

U1.39-201, humanhuman

BASIC

Gene U1, Length 146 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U1.39-201ENST00000621562 ATP6V0E2Q8NHE4 81 aa2.35□□□□□ -2.03
U1.39-201ENST00000621562 BBC3Q96PG8 261 aaPredicted RBP2.35□□□□□ -2.03
U1.39-201ENST00000621562 DUX5Q96PT3 197 aa2.35□□□□□ -2.03
U1.39-201ENST00000621562 SPATA25Q9BR10 227 aa2.35□□□□□ -2.03
U1.39-201ENST00000621562 VPS25Q9BRG1 176 aa2.35□□□□□ -2.03
U1.39-201ENST00000621562 CHCHD7Q9BUK0 85 aa2.35□□□□□ -2.03
U1.39-201ENST00000621562 MAP6D1Q9H9H5 199 aa2.35□□□□□ -2.03
U1.39-201ENST00000621562 PGPEP1Q9NXJ5 209 aa2.35□□□□□ -2.03
U1.39-201ENST00000621562 Q9UF83 564 aa2.35□□□□□ -2.03
U1.39-201ENST00000621562 PYGO1Q9Y3Y4 419 aa2.35□□□□□ -2.03
U1.39-201ENST00000621562 DNAH10Q8IVF4 4471 aa2.34□□□□□ -2.03
U1.39-201ENST00000621562 A0A0J9YXV3 536 aa2.34□□□□□ -2.03
U1.39-201ENST00000621562 F8W1H4 67 aa2.34□□□□□ -2.03
U1.39-201ENST00000621562 H3BMG7 143 aa2.34□□□□□ -2.03
U1.39-201ENST00000621562 RHODO00212 210 aa2.34□□□□□ -2.03
U1.39-201ENST00000621562 HOXA3O43365 443 aaPredicted RBP2.34□□□□□ -2.03
U1.39-201ENST00000621562 TCL1BO95988 128 aa2.34□□□□□ -2.03
U1.39-201ENST00000621562 IGKV3-20P01619 116 aa2.34□□□□□ -2.03
U1.39-201ENST00000621562 IGHV3-33P01772 117 aa2.34□□□□□ -2.03
U1.39-201ENST00000621562 PRB1P04280 392 aa2.34□□□□□ -2.03
U1.39-201ENST00000621562 PRM2P04554 102 aa2.34□□□□□ -2.03
U1.39-201ENST00000621562 CFC1BP0CG36 223 aa2.34□□□□□ -2.03
U1.39-201ENST00000621562 CFC1P0CG37 223 aa2.34□□□□□ -2.03
U1.39-201ENST00000621562 CRYBA4P53673 196 aa2.34□□□□□ -2.03
U1.39-201ENST00000621562 PROK1P58294 105 aa2.34□□□□□ -2.03
U1.39-201ENST00000621562 HERVK_113P61574 105 aa2.34□□□□□ -2.03
U1.39-201ENST00000621562 MRPS36P82909 103 aaKnown RBP2.34□□□□□ -2.03
U1.39-201ENST00000621562 KRTAP1-1Q07627 177 aa2.34□□□□□ -2.03
U1.39-201ENST00000621562 COTL1Q14019 142 aa2.34□□□□□ -2.03
U1.39-201ENST00000621562 ODF3L2Q3SX64 289 aa2.34□□□□□ -2.03
U1.39-201ENST00000621562 ETDBQ3ZM63 59 aa2.34□□□□□ -2.03
U1.39-201ENST00000621562 FAM74A4Q5TZK3 123 aa2.34□□□□□ -2.03
U1.39-201ENST00000621562 MTURNQ8N3F0 131 aa2.34□□□□□ -2.03
U1.39-201ENST00000621562 TMEM263Q8WUH6 116 aaKnown RBP2.34□□□□□ -2.03
U1.39-201ENST00000621562 CARD19Q96LW7 228 aa2.34□□□□□ -2.03
U1.39-201ENST00000621562 LINC01600Q96MT4 127 aa2.34□□□□□ -2.03
U1.39-201ENST00000621562 CLUHP3Q96NS8 147 aa2.34□□□□□ -2.03
U1.39-201ENST00000621562 KIR2DL4Q99706 377 aa2.34□□□□□ -2.03
U1.39-201ENST00000621562 TSSC4Q9Y5U2 329 aaPredicted RBP2.34□□□□□ -2.03
U1.39-201ENST00000621562 DNAH6Q9C0G6 4158 aa2.34□□□□□ -2.03
U1.39-201ENST00000621562 DNAH7Q8WXX0 4024 aa2.34□□□□□ -2.04
U1.39-201ENST00000621562 TENM3Q9P273 2699 aa2.34□□□□□ -2.04
U1.39-201ENST00000621562 IGLV5-45A0A087WSX0 123 aa2.33□□□□□ -2.04
U1.39-201ENST00000621562 A0A0B4J2C4 111 aa2.33□□□□□ -2.04
U1.39-201ENST00000621562 IGLV5-39A0A0G2JS06 123 aa2.33□□□□□ -2.04
U1.39-201ENST00000621562 A0A0J9YXY3 114 aa2.33□□□□□ -2.04
U1.39-201ENST00000621562 TMEM238LA0A1B0GVL6 79 aa2.33□□□□□ -2.04
U1.39-201ENST00000621562 A6NJY4 79 aa2.33□□□□□ -2.04
U1.39-201ENST00000621562 TMEM238C9JI98 176 aa2.33□□□□□ -2.04
U1.39-201ENST00000621562 F5H697 171 aa2.33□□□□□ -2.04
U1.39-201ENST00000621562 I3L3M4 83 aa2.33□□□□□ -2.04
U1.39-201ENST00000621562 M0QXV9 152 aa2.33□□□□□ -2.04
U1.39-201ENST00000621562 RS1O15537 224 aa2.33□□□□□ -2.04
U1.39-201ENST00000621562 TGFAP01135 160 aa2.33□□□□□ -2.04
U1.39-201ENST00000621562 IGHV3-53P01767 116 aa2.33□□□□□ -2.04
U1.39-201ENST00000621562 IGHV3-30-3P0DP02 117 aa2.33□□□□□ -2.04
U1.39-201ENST00000621562 CD28P10747 220 aa2.33□□□□□ -2.04
U1.39-201ENST00000621562 DEFB131AP59861 70 aa2.33□□□□□ -2.04
U1.39-201ENST00000621562 ZNF415Q09FC8 603 aa2.33□□□□□ -2.04
U1.39-201ENST00000621562 GAGE13Q4V321 117 aa2.33□□□□□ -2.04
U1.39-201ENST00000621562 HIST2H2BDQ6DRA6 164 aa2.33□□□□□ -2.04
U1.39-201ENST00000621562 CEMP1Q6PRD7 247 aaPredicted RBP2.33□□□□□ -2.04
U1.39-201ENST00000621562 Q6ZUT4 128 aa2.33□□□□□ -2.04
U1.39-201ENST00000621562 FAM19A3Q7Z5A8 133 aa2.33□□□□□ -2.04
U1.39-201ENST00000621562 LRRC75A-AS1Q8N1F1 130 aa2.33□□□□□ -2.04
U1.39-201ENST00000621562 TMEM86BQ8N661 226 aa2.33□□□□□ -2.04
U1.39-201ENST00000621562 C4orf3Q8WVX3 66 aa2.33□□□□□ -2.04
U1.39-201ENST00000621562 DUX3Q96PT4 197 aa2.33□□□□□ -2.04
U1.39-201ENST00000621562 C1QTNF4Q9BXJ3 329 aa2.33□□□□□ -2.04
U1.39-201ENST00000621562 CDIP1Q9H305 208 aa2.33□□□□□ -2.04
U1.39-201ENST00000621562 BEX4Q9NWD9 120 aaPredicted RBP2.33□□□□□ -2.04
U1.39-201ENST00000621562 UBE2D4Q9Y2X8 147 aa2.33□□□□□ -2.04
U1.39-201ENST00000621562 PKD1L1Q8TDX9 2849 aa2.33□□□□□ -2.04
U1.39-201ENST00000621562 VPS13DQ5THJ4 4388 aa2.33□□□□□ -2.04
U1.39-201ENST00000621562 DNAH17Q9UFH2 4485 aa2.33□□□□□ -2.04
U1.39-201ENST00000621562 TRAV8-3A0A0A6YYJ7 113 aa2.32□□□□□ -2.04
U1.39-201ENST00000621562 IGHV3-73A0A0B4J1V6 119 aa2.32□□□□□ -2.04
U1.39-201ENST00000621562 TINCRA0A1B0GVN0 87 aa2.32□□□□□ -2.04
U1.39-201ENST00000621562 A4D1N5 150 aa2.32□□□□□ -2.04
U1.39-201ENST00000621562 GAGE12HA6NDE8 117 aa2.32□□□□□ -2.04
U1.39-201ENST00000621562 A8MWV9 139 aa2.32□□□□□ -2.04
U1.39-201ENST00000621562 APOMO95445 188 aa2.32□□□□□ -2.04
U1.39-201ENST00000621562 INSP01308 110 aa2.32□□□□□ -2.04
U1.39-201ENST00000621562 GIG44P09565 113 aaPredicted RBP2.32□□□□□ -2.04
U1.39-201ENST00000621562 LINC00694P0DN24 101 aa2.32□□□□□ -2.04
U1.39-201ENST00000621562 SCGB1A1P11684 91 aa2.32□□□□□ -2.04
U1.39-201ENST00000621562 LGALS3P17931 250 aaKnown RBP2.32□□□□□ -2.04
U1.39-201ENST00000621562 AZU1P20160 251 aa2.32□□□□□ -2.04
U1.39-201ENST00000621562 RPL24P83731 157 aaKnown RBP2.32□□□□□ -2.04
U1.39-201ENST00000621562 FOXI1Q12951 378 aa2.32□□□□□ -2.04
U1.39-201ENST00000621562 DEFB114Q30KQ6 69 aa2.32□□□□□ -2.04
U1.39-201ENST00000621562 DEFB113Q30KQ7 82 aa2.32□□□□□ -2.04
U1.39-201ENST00000621562 TMEM170BQ5T4T1 132 aa2.32□□□□□ -2.04
U1.39-201ENST00000621562 ADAMTSL4-AS1Q5T5F5 129 aa2.32□□□□□ -2.04
U1.39-201ENST00000621562 ZFAND6Q6FIF0 208 aa2.32□□□□□ -2.04
U1.39-201ENST00000621562 SCGB1D4Q6XE38 83 aa2.32□□□□□ -2.04
U1.39-201ENST00000621562 Q6ZSV7 163 aa2.32□□□□□ -2.04
U1.39-201ENST00000621562 C1orf158Q8N1D5 194 aa2.32□□□□□ -2.04
U1.39-201ENST00000621562 ZNF843Q8N446 348 aa2.32□□□□□ -2.04
U1.39-201ENST00000621562 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 186.7 ms