RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 COTL1Q14019 142 aa9.6□□□□□ -0.87
CBWD3-217ENST00000621474 LAGE3Q14657 143 aa9.6□□□□□ -0.87
CBWD3-217ENST00000621474 SVBPQ8N300 66 aa9.6□□□□□ -0.87
CBWD3-217ENST00000621474 CHCHD5Q9BSY4 110 aa9.6□□□□□ -0.87
CBWD3-217ENST00000621474 TRAV9-1A0A075B6T8 112 aa9.6□□□□□ -0.87
CBWD3-217ENST00000621474 CKS2P33552 79 aa9.6□□□□□ -0.87
CBWD3-217ENST00000621474 SUMO2P61956 95 aaKnown RBP9.6□□□□□ -0.87
CBWD3-217ENST00000621474 KCNIP4Q6PIL6 250 aa9.6□□□□□ -0.87
CBWD3-217ENST00000621474 Q8N976 141 aa9.6□□□□□ -0.87
CBWD3-217ENST00000621474 A0A087WX48 190 aa9.59□□□□□ -0.87
CBWD3-217ENST00000621474 I3L3M4 83 aa9.59□□□□□ -0.87
CBWD3-217ENST00000621474 TSHBP01222 138 aa9.59□□□□□ -0.87
CBWD3-217ENST00000621474 GAGE6Q13070 117 aa9.59□□□□□ -0.87
CBWD3-217ENST00000621474 ATRAIDQ6UW56 229 aa9.59□□□□□ -0.87
CBWD3-217ENST00000621474 TMEM136Q6ZRR5 245 aa9.59□□□□□ -0.87
CBWD3-217ENST00000621474 TMEM262E9PQX1 116 aa9.58□□□□□ -0.88
CBWD3-217ENST00000621474 SNAPINO95295 136 aa9.58□□□□□ -0.88
CBWD3-217ENST00000621474 TNFRSF6BO95407 300 aa9.58□□□□□ -0.88
CBWD3-217ENST00000621474 NPYP01303 97 aa9.58□□□□□ -0.88
CBWD3-217ENST00000621474 AMTP48728 403 aa9.58□□□□□ -0.88
CBWD3-217ENST00000621474 TMEM243Q9BU79 118 aa9.58□□□□□ -0.88
CBWD3-217ENST00000621474 KLK12Q9UKR0 248 aa9.58□□□□□ -0.88
CBWD3-217ENST00000621474 PPP1R17O96001 155 aa9.57□□□□□ -0.88
CBWD3-217ENST00000621474 RBX1P62877 108 aa9.57□□□□□ -0.88
CBWD3-217ENST00000621474 NDUFA5Q16718 116 aa9.57□□□□□ -0.88
CBWD3-217ENST00000621474 Q9HAA7 133 aa9.57□□□□□ -0.88
CBWD3-217ENST00000621474 PPBPP02775 128 aa9.56□□□□□ -0.88
CBWD3-217ENST00000621474 ESDP10768 282 aa9.56□□□□□ -0.88
CBWD3-217ENST00000621474 PMCHP20382 165 aa9.56□□□□□ -0.88
CBWD3-217ENST00000621474 ORMDL3Q8N138 153 aa9.56□□□□□ -0.88
CBWD3-217ENST00000621474 C20orf78Q9BR46 151 aa9.56□□□□□ -0.88
CBWD3-217ENST00000621474 IGLV4-60A0A075B6I1 120 aa9.56□□□□□ -0.88
CBWD3-217ENST00000621474 APCSP02743 223 aa9.56□□□□□ -0.88
CBWD3-217ENST00000621474 S100PP25815 95 aa9.56□□□□□ -0.88
CBWD3-217ENST00000621474 RPL32P62910 135 aaKnown RBP9.56□□□□□ -0.88
CBWD3-217ENST00000621474 ENHOQ6UWT2 76 aa9.56□□□□□ -0.88
CBWD3-217ENST00000621474 NFE4Q86UQ8 179 aa9.56□□□□□ -0.88
CBWD3-217ENST00000621474 C20orf203Q8NBC4 194 aa9.56□□□□□ -0.88
CBWD3-217ENST00000621474 DNAH5Q8TE73 4624 aa9.55□□□□□ -0.88
CBWD3-217ENST00000621474 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.55□□□□□ -0.88
CBWD3-217ENST00000621474 A0A1B0GUV1 79 aa9.55□□□□□ -0.88
CBWD3-217ENST00000621474 IGKV2-29A2NJV5 120 aaPredicted RBP9.55□□□□□ -0.88
CBWD3-217ENST00000621474 VCYO14598 125 aa9.55□□□□□ -0.88
CBWD3-217ENST00000621474 PHOX2AO14813 284 aa9.55□□□□□ -0.88
CBWD3-217ENST00000621474 ANGP03950 147 aaKnown RBP9.55□□□□□ -0.88
CBWD3-217ENST00000621474 ELOBQ15370 118 aa9.55□□□□□ -0.88
CBWD3-217ENST00000621474 PKIAP61925 76 aa9.54□□□□□ -0.88
CBWD3-217ENST00000621474 PRELID3AQ96N28 172 aa9.54□□□□□ -0.88
CBWD3-217ENST00000621474 SMIM2Q9BVW6 85 aa9.54□□□□□ -0.88
CBWD3-217ENST00000621474 PRR34Q9NV39 138 aa9.54□□□□□ -0.88
CBWD3-217ENST00000621474 TRAV8-3A0A0A6YYJ7 113 aa9.53□□□□□ -0.88
CBWD3-217ENST00000621474 UBE2WQ96B02 151 aa9.53□□□□□ -0.88
CBWD3-217ENST00000621474 YPEL4Q96NS1 127 aa9.53□□□□□ -0.88
CBWD3-217ENST00000621474 GNB1LQ9BYB4 327 aa9.53□□□□□ -0.88
CBWD3-217ENST00000621474 TGIF2-C20orf24A0A0A6YYL0 155 aa9.53□□□□□ -0.88
CBWD3-217ENST00000621474 PRSS47A8MTI9 375 aa9.53□□□□□ -0.88
CBWD3-217ENST00000621474 HLA-DQA1P01909 254 aa9.53□□□□□ -0.88
CBWD3-217ENST00000621474 MAPKAPK5-AS1Q8N8E1 139 aa9.53□□□□□ -0.88
CBWD3-217ENST00000621474 BIRC6Q9NR09 4857 aa9.52□□□□□ -0.89
CBWD3-217ENST00000621474 LRCOL1A6NCL2 159 aa9.52□□□□□ -0.89
CBWD3-217ENST00000621474 H7C423 109 aa9.52□□□□□ -0.89
CBWD3-217ENST00000621474 UBE2L6O14933 153 aa9.52□□□□□ -0.89
CBWD3-217ENST00000621474 KIAA1644Q3SXP7 199 aa9.52□□□□□ -0.89
CBWD3-217ENST00000621474 CLPSL2Q6UWE3 100 aa9.52□□□□□ -0.89
CBWD3-217ENST00000621474 LINC00269Q8N2A0 174 aa9.52□□□□□ -0.89
CBWD3-217ENST00000621474 KIR2DL4Q99706 377 aa9.52□□□□□ -0.89
CBWD3-217ENST00000621474 LAMTOR2Q9Y2Q5 125 aa9.52□□□□□ -0.89
CBWD3-217ENST00000621474 FGF6P10767 208 aa9.51□□□□□ -0.89
CBWD3-217ENST00000621474 A0A087WTM6 91 aa9.5□□□□□ -0.89
CBWD3-217ENST00000621474 DYNC1H1Q14204 4646 aaKnown RBP9.5□□□□□ -0.89
CBWD3-217ENST00000621474 TCAPO15273 167 aa9.49□□□□□ -0.89
CBWD3-217ENST00000621474 FCER1GP30273 86 aa9.49□□□□□ -0.89
CBWD3-217ENST00000621474 REG3AQ06141 175 aa9.49□□□□□ -0.89
CBWD3-217ENST00000621474 Q0VG73 95 aa9.49□□□□□ -0.89
CBWD3-217ENST00000621474 WFDC2Q14508 124 aa9.49□□□□□ -0.89
CBWD3-217ENST00000621474 KRTAP26-1Q6PEX3 210 aa9.49□□□□□ -0.89
CBWD3-217ENST00000621474 CBLN2Q8IUK8 224 aa9.49□□□□□ -0.89
CBWD3-217ENST00000621474 CRPP02741 224 aa9.49□□□□□ -0.89
CBWD3-217ENST00000621474 KRTAP10-2P60368 255 aa9.49□□□□□ -0.89
CBWD3-217ENST00000621474 MIAQ16674 131 aa9.49□□□□□ -0.89
CBWD3-217ENST00000621474 COX19Q49B96 90 aa9.49□□□□□ -0.89
CBWD3-217ENST00000621474 MRPL52Q86TS9 123 aaKnown RBP9.49□□□□□ -0.89
CBWD3-217ENST00000621474 LRP1BQ9NZR2 4599 aa9.48□□□□□ -0.89
CBWD3-217ENST00000621474 IGKV2D-24A0A075B6R9 120 aa9.48□□□□□ -0.89
CBWD3-217ENST00000621474 LOC389332A0A1B0GUA5 103 aa9.48□□□□□ -0.89
CBWD3-217ENST00000621474 PSCAO43653 123 aa9.48□□□□□ -0.89
CBWD3-217ENST00000621474 MT-ND6P03923 174 aa9.48□□□□□ -0.89
CBWD3-217ENST00000621474 ZNF25P17030 456 aaPredicted RBP9.48□□□□□ -0.89
CBWD3-217ENST00000621474 RNASEKQ6P5S7 137 aaKnown RBP9.48□□□□□ -0.89
CBWD3-217ENST00000621474 MRPL18Q9H0U6 180 aaKnown RBP9.48□□□□□ -0.89
CBWD3-217ENST00000621474 MAP1LC3AQ9H492 121 aa9.48□□□□□ -0.89
CBWD3-217ENST00000621474 UBE2D4Q9Y2X8 147 aa9.48□□□□□ -0.89
CBWD3-217ENST00000621474 RPL39P62891 51 aaKnown RBP9.47□□□□□ -0.89
CBWD3-217ENST00000621474 AMMECR1LQ6DCA0 310 aa9.47□□□□□ -0.89
CBWD3-217ENST00000621474 ALKBH7Q9BT30 221 aaPredicted RBP9.47□□□□□ -0.89
CBWD3-217ENST00000621474 TM2D2Q9BX73 214 aa9.47□□□□□ -0.89
CBWD3-217ENST00000621474 FAM104AQ969W3 186 aa9.46□□□□□ -0.89
CBWD3-217ENST00000621474 C1orf43Q9BWL3 253 aa9.46□□□□□ -0.89
CBWD3-217ENST00000621474 CDC42SE2Q9NRR3 84 aa9.46□□□□□ -0.89
CBWD3-217ENST00000621474 IGLV10-54A0A075B6I4 117 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms