RNA–Protein interactions for RNA: ENST00000620394.1

SRRT-218, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-218ENST00000620394 NIT2Q9NQR4 276 aa14.22□□□□□ -0.13
SRRT-218ENST00000620394 C9orf163Q8N9P6 203 aa14.21□□□□□ -0.13
SRRT-218ENST00000620394 RPP21Q9H633 154 aaKnown RBP14.2□□□□□ -0.14
SRRT-218ENST00000620394 TRAV8-4A0A0B4J246 113 aa14.19□□□□□ -0.14
SRRT-218ENST00000620394 K7EN84 100 aa14.19□□□□□ -0.14
SRRT-218ENST00000620394 RPL37AP61513 92 aaKnown RBP14.19□□□□□ -0.14
SRRT-218ENST00000620394 PKHD1L1Q86WI1 4243 aa14.19□□□□□ -0.14
SRRT-218ENST00000620394 IGLV4-60A0A075B6I1 120 aa14.18□□□□□ -0.14
SRRT-218ENST00000620394 CLRN3Q8NCR9 226 aa14.18□□□□□ -0.14
SRRT-218ENST00000620394 GFRA4Q9GZZ7 299 aa14.18□□□□□ -0.14
SRRT-218ENST00000620394 IGLV10-54A0A075B6I4 117 aa14.17□□□□□ -0.14
SRRT-218ENST00000620394 RNASE7Q9H1E1 156 aaKnown RBP14.17□□□□□ -0.14
SRRT-218ENST00000620394 CNBPP62633 177 aaKnown RBP14.16□□□□□ -0.14
SRRT-218ENST00000620394 COTL1Q14019 142 aa14.16□□□□□ -0.14
SRRT-218ENST00000620394 OCC1Q8TAD7 63 aa14.16□□□□□ -0.14
SRRT-218ENST00000620394 TWIST1Q15672 202 aa14.15□□□□□ -0.14
SRRT-218ENST00000620394 Q6ZNX1 250 aa14.15□□□□□ -0.14
SRRT-218ENST00000620394 GATD1Q8NB37 220 aa14.15□□□□□ -0.14
SRRT-218ENST00000620394 TMEM250H0YL14 139 aa14.14□□□□□ -0.15
SRRT-218ENST00000620394 AMTP48728 403 aa14.14□□□□□ -0.15
SRRT-218ENST00000620394 GTSF1Q8WW33 167 aa14.14□□□□□ -0.15
SRRT-218ENST00000620394 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.14□□□□□ -0.15
SRRT-218ENST00000620394 UBE2L6O14933 153 aa14.13□□□□□ -0.15
SRRT-218ENST00000620394 SDIM1Q6ZPB5 146 aa14.13□□□□□ -0.15
SRRT-218ENST00000620394 LYPD6BQ8NI32 183 aa14.13□□□□□ -0.15
SRRT-218ENST00000620394 TRAV26-2A0A0B4J265 109 aa14.12□□□□□ -0.15
SRRT-218ENST00000620394 HNRNPA3P51991 378 aaKnown RBP14.12□□□□□ -0.15
SRRT-218ENST00000620394 CIRBPQ14011 172 aaKnown RBP14.12□□□□□ -0.15
SRRT-218ENST00000620394 PANO1I0J062 215 aa14.11□□□□□ -0.15
SRRT-218ENST00000620394 FAM231DQ6ZW35 169 aa14.11□□□□□ -0.15
SRRT-218ENST00000620394 hDV102S1A0JD36 115 aa14.1□□□□□ -0.15
SRRT-218ENST00000620394 BLOC1S1P78537 153 aa14.1□□□□□ -0.15
SRRT-218ENST00000620394 NCR2O95944 276 aa14.09□□□□□ -0.15
SRRT-218ENST00000620394 CT83Q5H943 113 aa14.09□□□□□ -0.15
SRRT-218ENST00000620394 ALKAL2Q6UX46 152 aa14.09□□□□□ -0.15
SRRT-218ENST00000620394 AKAP14Q86UN6 197 aa14.09□□□□□ -0.15
SRRT-218ENST00000620394 TEX261Q6UWH6 196 aa14.08□□□□□ -0.16
SRRT-218ENST00000620394 RPL39LQ96EH5 51 aaKnown RBP14.08□□□□□ -0.16
SRRT-218ENST00000620394 SLPIP03973 132 aa14.07□□□□□ -0.16
SRRT-218ENST00000620394 MT1HL1P0DM35 61 aa14.07□□□□□ -0.16
SRRT-218ENST00000620394 SMIM15Q7Z3B0 74 aa14.07□□□□□ -0.16
SRRT-218ENST00000620394 A8MWL6 223 aa14.06□□□□□ -0.16
SRRT-218ENST00000620394 H7C423 109 aa14.06□□□□□ -0.16
SRRT-218ENST00000620394 GATCO43716 136 aaKnown RBP14.06□□□□□ -0.16
SRRT-218ENST00000620394 NDUFS6O75380 124 aaKnown RBP14.06□□□□□ -0.16
SRRT-218ENST00000620394 FOXA3P55318 350 aaPredicted RBP14.06□□□□□ -0.16
SRRT-218ENST00000620394 C15orf56Q8N910 161 aa14.06□□□□□ -0.16
SRRT-218ENST00000620394 AP5S1Q9NUS5 200 aa14.06□□□□□ -0.16
SRRT-218ENST00000620394 SDHAF1A6NFY7 115 aa14.05□□□□□ -0.16
SRRT-218ENST00000620394 IGHV3-64A0A075B6Q5 118 aa14.04□□□□□ -0.16
SRRT-218ENST00000620394 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.04□□□□□ -0.16
SRRT-218ENST00000620394 APCSP02743 223 aa14.04□□□□□ -0.16
SRRT-218ENST00000620394 TRBV6-5A0A0K0K1A5 114 aa14.03□□□□□ -0.16
SRRT-218ENST00000620394 Q6ZRU5 148 aa14.03□□□□□ -0.16
SRRT-218ENST00000620394 RNF185Q96GF1 192 aa14.03□□□□□ -0.16
SRRT-218ENST00000620394 GAGE12HA6NDE8 117 aa14.02□□□□□ -0.17
SRRT-218ENST00000620394 AMMECR1LQ6DCA0 310 aa14.02□□□□□ -0.17
SRRT-218ENST00000620394 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.01□□□□□ -0.17
SRRT-218ENST00000620394 IGKV2-29A2NJV5 120 aaPredicted RBP14.01□□□□□ -0.17
SRRT-218ENST00000620394 FGF6P10767 208 aa14.01□□□□□ -0.17
SRRT-218ENST00000620394 ZNF25P17030 456 aaPredicted RBP14.01□□□□□ -0.17
SRRT-218ENST00000620394 CFAP161Q6P656 301 aa14.01□□□□□ -0.17
SRRT-218ENST00000620394 LINC01551Q86U37 167 aa14.01□□□□□ -0.17
SRRT-218ENST00000620394 SPACA4Q8TDM5 124 aa14.01□□□□□ -0.17
SRRT-218ENST00000620394 FAM231BA6NCW3 169 aa14□□□□□ -0.17
SRRT-218ENST00000620394 CHCHD10Q8WYQ3 142 aaPredicted RBP14□□□□□ -0.17
SRRT-218ENST00000620394 FAM210AQ96ND0 272 aa14□□□□□ -0.17
SRRT-218ENST00000620394 SMIM7Q9BQ49 75 aa14□□□□□ -0.17
SRRT-218ENST00000620394 I3L3M4 83 aa13.99□□□□□ -0.17
SRRT-218ENST00000620394 RNASEKQ6P5S7 137 aaKnown RBP13.99□□□□□ -0.17
SRRT-218ENST00000620394 TSKUQ8WUA8 353 aa13.99□□□□□ -0.17
SRRT-218ENST00000620394 hCG_2014768A0A024R1R8 64 aa13.98□□□□□ -0.17
SRRT-218ENST00000620394 GVQW2A0A096LPI5 108 aaPredicted RBP13.98□□□□□ -0.17
SRRT-218ENST00000620394 IGKV3OR2-268A0A0C4DH90 116 aa13.98□□□□□ -0.17
SRRT-218ENST00000620394 A0A1B0GUT8 65 aa13.98□□□□□ -0.17
SRRT-218ENST00000620394 HIGD1CA8MV81 97 aa13.98□□□□□ -0.17
SRRT-218ENST00000620394 CHTF8P0CG12 524 aa13.98□□□□□ -0.17
SRRT-218ENST00000620394 ESDP10768 282 aa13.98□□□□□ -0.17
SRRT-218ENST00000620394 CEBPGP53567 150 aa13.98□□□□□ -0.17
SRRT-218ENST00000620394 BORCS7Q96B45 105 aa13.98□□□□□ -0.17
SRRT-218ENST00000620394 TMEM191AQ9H0A3 160 aa13.98□□□□□ -0.17
SRRT-218ENST00000620394 A0A087WYN8 130 aa13.97□□□□□ -0.17
SRRT-218ENST00000620394 GAS8-AS1O95177 125 aa13.97□□□□□ -0.17
SRRT-218ENST00000620394 TSHBP01222 138 aa13.97□□□□□ -0.17
SRRT-218ENST00000620394 OSTCQ9NRP0 149 aa13.97□□□□□ -0.17
SRRT-218ENST00000620394 OR5A1Q8NGJ0 315 aa13.96□□□□□ -0.17
SRRT-218ENST00000620394 EIF5A2Q9GZV4 153 aaKnown RBP13.96□□□□□ -0.17
SRRT-218ENST00000620394 PLAC8Q9NZF1 115 aa13.96□□□□□ -0.17
SRRT-218ENST00000620394 PMCHP20382 165 aa13.95□□□□□ -0.18
SRRT-218ENST00000620394 RPS10P46783 165 aaKnown RBP13.95□□□□□ -0.18
SRRT-218ENST00000620394 FOXI1Q12951 378 aa13.95□□□□□ -0.18
SRRT-218ENST00000620394 ST20Q9HBF5 79 aa13.95□□□□□ -0.18
SRRT-218ENST00000620394 ZNF727A8MUV8 499 aa13.94□□□□□ -0.18
SRRT-218ENST00000620394 SRP19P09132 144 aaKnown RBP13.94□□□□□ -0.18
SRRT-218ENST00000620394 POLR2KP53803 58 aaKnown RBP13.94□□□□□ -0.18
SRRT-218ENST00000620394 HIGD2BQ4VC39 106 aa13.94□□□□□ -0.18
SRRT-218ENST00000620394 MRAP2Q96G30 205 aa13.94□□□□□ -0.18
SRRT-218ENST00000620394 TMEM242Q9NWH2 141 aa13.94□□□□□ -0.18
SRRT-218ENST00000620394 LRP2P98164 4655 aa13.94□□□□□ -0.18
SRRT-218ENST00000620394 TRBV27A0A0K0K1C4 114 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms