RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 I3L3M4 83 aa5.59□□□□□ -1.51
CPNE3-209ENST00000620393 LINC00694P0DN24 101 aa5.59□□□□□ -1.51
CPNE3-209ENST00000620393 PMCHP20382 165 aa5.59□□□□□ -1.51
CPNE3-209ENST00000620393 MRPL23Q16540 153 aaKnown RBP5.59□□□□□ -1.51
CPNE3-209ENST00000620393 COA6Q5JTJ3 125 aaKnown RBP5.59□□□□□ -1.51
CPNE3-209ENST00000620393 SH2D6Q7Z4S9 175 aa5.59□□□□□ -1.51
CPNE3-209ENST00000620393 DAZ4Q86SG3 579 aaKnown RBP5.59□□□□□ -1.51
CPNE3-209ENST00000620393 SMIM2Q9BVW6 85 aa5.59□□□□□ -1.51
CPNE3-209ENST00000620393 DAZ3Q9NR90 486 aaKnown RBP5.59□□□□□ -1.51
CPNE3-209ENST00000620393 FBN3Q75N90 2809 aa5.59□□□□□ -1.51
CPNE3-209ENST00000620393 A0A096LPF7 62 aa5.58□□□□□ -1.52
CPNE3-209ENST00000620393 LINC01546A6NGU7 62 aa5.58□□□□□ -1.52
CPNE3-209ENST00000620393 K7EMI3 77 aa5.58□□□□□ -1.52
CPNE3-209ENST00000620393 NDUFA6P56556 154 aa5.58□□□□□ -1.52
CPNE3-209ENST00000620393 FA2HQ7L5A8 372 aa5.58□□□□□ -1.52
CPNE3-209ENST00000620393 NEGR1Q7Z3B1 354 aa5.58□□□□□ -1.52
CPNE3-209ENST00000620393 ATP6V0E2Q8NHE4 81 aa5.58□□□□□ -1.52
CPNE3-209ENST00000620393 URB1-AS1Q96HZ7 61 aa5.58□□□□□ -1.52
CPNE3-209ENST00000620393 ICOSQ9Y6W8 199 aa5.58□□□□□ -1.52
CPNE3-209ENST00000620393 IGHV3-38A0A0C4DH36 116 aa5.57□□□□□ -1.52
CPNE3-209ENST00000620393 TCAPO15273 167 aa5.57□□□□□ -1.52
CPNE3-209ENST00000620393 NUPR1O60356 82 aa5.57□□□□□ -1.52
CPNE3-209ENST00000620393 CEMP1Q6PRD7 247 aaPredicted RBP5.57□□□□□ -1.52
CPNE3-209ENST00000620393 CHCHD1Q96BP2 118 aaKnown RBP5.57□□□□□ -1.52
CPNE3-209ENST00000620393 KIR2DL4Q99706 377 aa5.57□□□□□ -1.52
CPNE3-209ENST00000620393 NACAE9PAV3 2078 aa5.57□□□□□ -1.52
CPNE3-209ENST00000620393 IGLL5B9A064 214 aa5.56□□□□□ -1.52
CPNE3-209ENST00000620393 SERF1AO75920 110 aa5.56□□□□□ -1.52
CPNE3-209ENST00000620393 NUDT3O95989 172 aa5.56□□□□□ -1.52
CPNE3-209ENST00000620393 TSHBP01222 138 aa5.56□□□□□ -1.52
CPNE3-209ENST00000620393 S100A6P06703 90 aa5.56□□□□□ -1.52
CPNE3-209ENST00000620393 ESDP10768 282 aa5.56□□□□□ -1.52
CPNE3-209ENST00000620393 FCER1GP30273 86 aa5.56□□□□□ -1.52
CPNE3-209ENST00000620393 LINC00310P59036 64 aa5.56□□□□□ -1.52
CPNE3-209ENST00000620393 COTL1Q14019 142 aa5.56□□□□□ -1.52
CPNE3-209ENST00000620393 LAGE3Q14657 143 aa5.56□□□□□ -1.52
CPNE3-209ENST00000620393 TMEM97Q5BJF2 176 aa5.56□□□□□ -1.52
CPNE3-209ENST00000620393 RNASEKQ6P5S7 137 aaKnown RBP5.56□□□□□ -1.52
CPNE3-209ENST00000620393 LYPD5Q6UWN5 251 aa5.56□□□□□ -1.52
CPNE3-209ENST00000620393 NTM-AS1Q6ZSK4 140 aa5.56□□□□□ -1.52
CPNE3-209ENST00000620393 C15orf53Q8NAA6 179 aa5.56□□□□□ -1.52
CPNE3-209ENST00000620393 DEFB104AQ8WTQ1 72 aa5.56□□□□□ -1.52
CPNE3-209ENST00000620393 GTSF1LQ9H1H1 148 aa5.56□□□□□ -1.52
CPNE3-209ENST00000620393 AP5S1Q9NUS5 200 aa5.56□□□□□ -1.52
CPNE3-209ENST00000620393 COL7A1Q02388 2944 aa5.55□□□□□ -1.52
CPNE3-209ENST00000620393 STAB2Q8WWQ8 2551 aa5.55□□□□□ -1.52
CPNE3-209ENST00000620393 NUPR2A6NF83 97 aa5.55□□□□□ -1.52
CPNE3-209ENST00000620393 HSBP1O75506 76 aa5.55□□□□□ -1.52
CPNE3-209ENST00000620393 G0S2P27469 103 aa5.55□□□□□ -1.52
CPNE3-209ENST00000620393 TIRAPP58753 221 aa5.55□□□□□ -1.52
CPNE3-209ENST00000620393 ORMDL2Q53FV1 153 aa5.55□□□□□ -1.52
CPNE3-209ENST00000620393 WWC2-AS2Q96NR7 200 aa5.55□□□□□ -1.52
CPNE3-209ENST00000620393 KRTAP4-11Q9BYQ6 195 aa5.55□□□□□ -1.52
CPNE3-209ENST00000620393 KRTAP4-5Q9BYR2 181 aa5.55□□□□□ -1.52
CPNE3-209ENST00000620393 TMA7Q9Y2S6 64 aaKnown RBP5.55□□□□□ -1.52
CPNE3-209ENST00000620393 KLK5Q9Y337 293 aaPredicted RBP5.55□□□□□ -1.52
CPNE3-209ENST00000620393 TRBV6-8A0A0A6YYG3 113 aa5.54□□□□□ -1.52
CPNE3-209ENST00000620393 C5orf52A6NGY3 159 aa5.54□□□□□ -1.52
CPNE3-209ENST00000620393 SNRPEP62304 92 aaKnown RBP5.54□□□□□ -1.52
CPNE3-209ENST00000620393 ESRGQ1W209 222 aa5.54□□□□□ -1.52
CPNE3-209ENST00000620393 CHCHD7Q9BUK0 85 aa5.54□□□□□ -1.52
CPNE3-209ENST00000620393 APLNQ9ULZ1 77 aa5.54□□□□□ -1.52
CPNE3-209ENST00000620393 TRBV25-1A0A075B6N4 114 aa5.53□□□□□ -1.52
CPNE3-209ENST00000620393 IGHV1-24A0A0C4DH33 117 aa5.53□□□□□ -1.52
CPNE3-209ENST00000620393 AMTP48728 403 aa5.53□□□□□ -1.52
CPNE3-209ENST00000620393 TCTAP57738 103 aa5.53□□□□□ -1.52
CPNE3-209ENST00000620393 LELP1Q5T871 98 aa5.53□□□□□ -1.52
CPNE3-209ENST00000620393 FAM19A2Q8N3H0 131 aa5.53□□□□□ -1.52
CPNE3-209ENST00000620393 C20orf203Q8NBC4 194 aa5.53□□□□□ -1.52
CPNE3-209ENST00000620393 MUC7Q8TAX7 377 aa5.53□□□□□ -1.52
CPNE3-209ENST00000620393 TMEM243Q9BU79 118 aa5.53□□□□□ -1.52
CPNE3-209ENST00000620393 A0A096LNJ9 63 aa5.52□□□□□ -1.53
CPNE3-209ENST00000620393 LINC01549A6NIU2 74 aa5.52□□□□□ -1.53
CPNE3-209ENST00000620393 H7C423 109 aa5.52□□□□□ -1.53
CPNE3-209ENST00000620393 HBDP02042 147 aa5.52□□□□□ -1.53
CPNE3-209ENST00000620393 BTF3P20290 206 aaKnown RBP5.52□□□□□ -1.53
CPNE3-209ENST00000620393 PMCHL1Q16048 86 aa5.52□□□□□ -1.53
CPNE3-209ENST00000620393 C2orf66Q6UXQ4 117 aa5.52□□□□□ -1.53
CPNE3-209ENST00000620393 HIST3H2BBQ8N257 126 aa5.52□□□□□ -1.53
CPNE3-209ENST00000620393 TMEM18Q96B42 140 aa5.52□□□□□ -1.53
CPNE3-209ENST00000620393 TOMM6Q96B49 74 aa5.52□□□□□ -1.53
CPNE3-209ENST00000620393 PACRGQ96M98 296 aaPredicted RBP5.52□□□□□ -1.53
CPNE3-209ENST00000620393 KRTAP9-8Q9BYQ0 159 aa5.52□□□□□ -1.53
CPNE3-209ENST00000620393 CYSLTR1Q9Y271 337 aa5.52□□□□□ -1.53
CPNE3-209ENST00000620393 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.51□□□□□ -1.53
CPNE3-209ENST00000620393 IGKV2-29A2NJV5 120 aaPredicted RBP5.51□□□□□ -1.53
CPNE3-209ENST00000620393 CCL18P55774 89 aa5.51□□□□□ -1.53
CPNE3-209ENST00000620393 RPL39P62891 51 aaKnown RBP5.51□□□□□ -1.53
CPNE3-209ENST00000620393 PDZD11Q5EBL8 140 aa5.51□□□□□ -1.53
CPNE3-209ENST00000620393 ZFAND6Q6FIF0 208 aa5.51□□□□□ -1.53
CPNE3-209ENST00000620393 CHCHD5Q9BSY4 110 aa5.51□□□□□ -1.53
CPNE3-209ENST00000620393 PYGO1Q9Y3Y4 419 aa5.51□□□□□ -1.53
CPNE3-209ENST00000620393 DYNC2H1Q8NCM8 4307 aaKnown RBP5.51□□□□□ -1.53
CPNE3-209ENST00000620393 DNAH7Q8WXX0 4024 aa5.51□□□□□ -1.53
CPNE3-209ENST00000620393 TRAV8-6A0A0B4J262 113 aa5.5□□□□□ -1.53
CPNE3-209ENST00000620393 IGIPA6NJ69 53 aa5.5□□□□□ -1.53
CPNE3-209ENST00000620393 TMEM262E9PQX1 116 aa5.5□□□□□ -1.53
CPNE3-209ENST00000620393 UBE2L6O14933 153 aa5.5□□□□□ -1.53
CPNE3-209ENST00000620393 LEPROTL1O95214 131 aa5.5□□□□□ -1.53
CPNE3-209ENST00000620393 S100A2P29034 98 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 130.2 ms