RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 C19orf73Q9NVV2 129 aa5.25□□□□□ -1.57
SRGAP3-213ENST00000618999 AGRNO00468 2067 aa5.25□□□□□ -1.57
SRGAP3-213ENST00000618999 A0A0J9YY99 117 aa5.24□□□□□ -1.57
SRGAP3-213ENST00000618999 F6UB75 175 aa5.24□□□□□ -1.57
SRGAP3-213ENST00000618999 NDUFA4O00483 81 aa5.24□□□□□ -1.57
SRGAP3-213ENST00000618999 IGF1P05019 195 aa5.24□□□□□ -1.57
SRGAP3-213ENST00000618999 UBE2D1P51668 147 aa5.24□□□□□ -1.57
SRGAP3-213ENST00000618999 Q6YL49 198 aa5.24□□□□□ -1.57
SRGAP3-213ENST00000618999 CLPSL1A2RUU4 121 aa5.24□□□□□ -1.57
SRGAP3-213ENST00000618999 CFC1BP0CG36 223 aa5.24□□□□□ -1.57
SRGAP3-213ENST00000618999 CFC1P0CG37 223 aa5.24□□□□□ -1.57
SRGAP3-213ENST00000618999 RPL39P62891 51 aaKnown RBP5.24□□□□□ -1.57
SRGAP3-213ENST00000618999 PRR9Q5T870 116 aa5.24□□□□□ -1.57
SRGAP3-213ENST00000618999 RHPN1-AS1Q9BWJ2 59 aa5.24□□□□□ -1.57
SRGAP3-213ENST00000618999 TRAV12-3A0A0B4J271 114 aa5.24□□□□□ -1.57
SRGAP3-213ENST00000618999 SMCPP49901 116 aaPredicted RBP5.24□□□□□ -1.57
SRGAP3-213ENST00000618999 ZFAND2AQ8N6M9 145 aa5.24□□□□□ -1.57
SRGAP3-213ENST00000618999 TIMM17AQ99595 171 aa5.24□□□□□ -1.57
SRGAP3-213ENST00000618999 CR1P17927 2039 aa5.24□□□□□ -1.57
SRGAP3-213ENST00000618999 HTN1P15515 57 aa5.23□□□□□ -1.57
SRGAP3-213ENST00000618999 XGP55808 180 aa5.23□□□□□ -1.57
SRGAP3-213ENST00000618999 SUMO4Q6EEV6 95 aa5.23□□□□□ -1.57
SRGAP3-213ENST00000618999 DEFB1P60022 68 aa5.23□□□□□ -1.57
SRGAP3-213ENST00000618999 SNRPD3P62318 126 aaKnown RBP5.23□□□□□ -1.57
SRGAP3-213ENST00000618999 USMG5Q96IX5 58 aa5.23□□□□□ -1.57
SRGAP3-213ENST00000618999 M0R2P5 195 aa5.23□□□□□ -1.57
SRGAP3-213ENST00000618999 CD28P10747 220 aa5.23□□□□□ -1.57
SRGAP3-213ENST00000618999 SLC25A29Q8N8R3 303 aa5.23□□□□□ -1.57
SRGAP3-213ENST00000618999 NTN5Q8WTR8 489 aaPredicted RBP5.23□□□□□ -1.57
SRGAP3-213ENST00000618999 C20orf173Q96LM9 149 aa5.23□□□□□ -1.57
SRGAP3-213ENST00000618999 SMR3AQ99954 134 aa5.23□□□□□ -1.57
SRGAP3-213ENST00000618999 FSHBP01225 129 aa5.22□□□□□ -1.57
SRGAP3-213ENST00000618999 PLA2G1BP04054 148 aaKnown RBP5.22□□□□□ -1.57
SRGAP3-213ENST00000618999 UBE2D3P61077 147 aa5.22□□□□□ -1.57
SRGAP3-213ENST00000618999 UBE2D2P62837 147 aa5.22□□□□□ -1.57
SRGAP3-213ENST00000618999 GAGE5Q13069 117 aa5.22□□□□□ -1.57
SRGAP3-213ENST00000618999 GAGE6Q13070 117 aa5.22□□□□□ -1.57
SRGAP3-213ENST00000618999 C2orf82Q6UX34 121 aa5.22□□□□□ -1.57
SRGAP3-213ENST00000618999 NFE4Q86UQ8 179 aa5.22□□□□□ -1.57
SRGAP3-213ENST00000618999 LEPROTO15243 131 aa5.22□□□□□ -1.57
SRGAP3-213ENST00000618999 TRPT1Q86TN4 253 aaKnown RBP5.22□□□□□ -1.57
SRGAP3-213ENST00000618999 DAZ1Q9NQZ3 744 aaKnown RBP5.22□□□□□ -1.57
SRGAP3-213ENST00000618999 TIMM21Q9BVV7 248 aa5.22□□□□□ -1.57
SRGAP3-213ENST00000618999 H3BMM0 161 aa5.21□□□□□ -1.57
SRGAP3-213ENST00000618999 M0QXV9 152 aa5.21□□□□□ -1.57
SRGAP3-213ENST00000618999 IGHV3-30P01768 117 aa5.21□□□□□ -1.57
SRGAP3-213ENST00000618999 IGHV3-30-5P0DP03 117 aa5.21□□□□□ -1.57
SRGAP3-213ENST00000618999 RHOHQ15669 191 aa5.21□□□□□ -1.57
SRGAP3-213ENST00000618999 ZNF876PQ49A33 203 aa5.21□□□□□ -1.57
SRGAP3-213ENST00000618999 UNQ9165/PRO28630Q6UXU0 137 aa5.21□□□□□ -1.57
SRGAP3-213ENST00000618999 UBE2WQ96B02 151 aa5.21□□□□□ -1.57
SRGAP3-213ENST00000618999 C10orf99Q6UWK7 81 aa5.21□□□□□ -1.58
SRGAP3-213ENST00000618999 MUSTN1Q8IVN3 82 aa5.21□□□□□ -1.58
SRGAP3-213ENST00000618999 JPT2Q9H910 190 aa5.21□□□□□ -1.58
SRGAP3-213ENST00000618999 TNFRSF18Q9Y5U5 241 aa5.21□□□□□ -1.58
SRGAP3-213ENST00000618999 NBPF19A0A087WUL8 3843 aa5.2□□□□□ -1.58
SRGAP3-213ENST00000618999 TRBV12-3P01733 135 aa5.2□□□□□ -1.58
SRGAP3-213ENST00000618999 IFITM1P13164 125 aa5.2□□□□□ -1.58
SRGAP3-213ENST00000618999 LINC01620Q4KN68 170 aa5.2□□□□□ -1.58
SRGAP3-213ENST00000618999 H3BUA1 57 aa5.2□□□□□ -1.58
SRGAP3-213ENST00000618999 I3L3M4 83 aa5.2□□□□□ -1.58
SRGAP3-213ENST00000618999 IGLV1-40P01703 118 aa5.2□□□□□ -1.58
SRGAP3-213ENST00000618999 RNASE3P12724 160 aaKnown RBP5.2□□□□□ -1.58
SRGAP3-213ENST00000618999 RPL32P62910 135 aaKnown RBP5.2□□□□□ -1.58
SRGAP3-213ENST00000618999 CIRBPQ14011 172 aaKnown RBP5.2□□□□□ -1.58
SRGAP3-213ENST00000618999 ZNF575Q86XF7 245 aa5.2□□□□□ -1.58
SRGAP3-213ENST00000618999 IGHV4OR15-8A0A075B7B6 117 aa5.2□□□□□ -1.58
SRGAP3-213ENST00000618999 A0A087WW49 117 aa5.2□□□□□ -1.58
SRGAP3-213ENST00000618999 CRIP2P52943 208 aaPredicted RBP5.2□□□□□ -1.58
SRGAP3-213ENST00000618999 MXRA5Q9NR99 2828 aa5.19□□□□□ -1.58
SRGAP3-213ENST00000618999 IGLV4-69A0A075B6H9 119 aa5.19□□□□□ -1.58
SRGAP3-213ENST00000618999 A0A0B4J2C4 111 aa5.19□□□□□ -1.58
SRGAP3-213ENST00000618999 GAGE12JA6NER3 117 aa5.19□□□□□ -1.58
SRGAP3-213ENST00000618999 DNAJC9-AS1A6NH13 148 aa5.19□□□□□ -1.58
SRGAP3-213ENST00000618999 IGIPA6NJ69 53 aa5.19□□□□□ -1.58
SRGAP3-213ENST00000618999 GAGE7O76087 117 aa5.19□□□□□ -1.58
SRGAP3-213ENST00000618999 GAGE12FP0CL80 117 aa5.19□□□□□ -1.58
SRGAP3-213ENST00000618999 GAGE12GP0CL81 117 aa5.19□□□□□ -1.58
SRGAP3-213ENST00000618999 GAGE12IP0CL82 117 aa5.19□□□□□ -1.58
SRGAP3-213ENST00000618999 GAGE4Q13068 117 aa5.19□□□□□ -1.58
SRGAP3-213ENST00000618999 PDZD2O15018 2839 aa5.19□□□□□ -1.58
SRGAP3-213ENST00000618999 A0A0J9YXV3 536 aa5.19□□□□□ -1.58
SRGAP3-213ENST00000618999 NPC2P61916 151 aa5.19□□□□□ -1.58
SRGAP3-213ENST00000618999 GPHB5Q86YW7 130 aa5.19□□□□□ -1.58
SRGAP3-213ENST00000618999 CARD19Q96LW7 228 aa5.19□□□□□ -1.58
SRGAP3-213ENST00000618999 ZNF702PQ9H963 129 aa5.19□□□□□ -1.58
SRGAP3-213ENST00000618999 LY6G6DO95868 133 aa5.19□□□□□ -1.58
SRGAP3-213ENST00000618999 IGHV3-33P01772 117 aa5.19□□□□□ -1.58
SRGAP3-213ENST00000618999 POLR2KP53803 58 aaKnown RBP5.19□□□□□ -1.58
SRGAP3-213ENST00000618999 C15orf53Q8NAA6 179 aa5.19□□□□□ -1.58
SRGAP3-213ENST00000618999 OPRPNQ99935 248 aaPredicted RBP5.19□□□□□ -1.58
SRGAP3-213ENST00000618999 TRAV12-2A0A075B6T6 113 aa5.18□□□□□ -1.58
SRGAP3-213ENST00000618999 RNASE1P07998 156 aaKnown RBP5.18□□□□□ -1.58
SRGAP3-213ENST00000618999 C5orf47Q569G3 176 aa5.18□□□□□ -1.58
SRGAP3-213ENST00000618999 NDUFA12Q9UI09 145 aa5.18□□□□□ -1.58
SRGAP3-213ENST00000618999 CRYGDP07320 174 aa5.18□□□□□ -1.58
SRGAP3-213ENST00000618999 TSPEAR-AS2P59090 65 aa5.18□□□□□ -1.58
SRGAP3-213ENST00000618999 KRTAP1-1Q07627 177 aa5.18□□□□□ -1.58
SRGAP3-213ENST00000618999 ZNRF2Q8NHG8 242 aa5.18□□□□□ -1.58
SRGAP3-213ENST00000618999 KLK9Q9UKQ9 250 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms