RNA–Protein interactions for RNA: ENST00000618061.4

CBWD1-226, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 2,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-226ENST00000618061 NHP2Q9NX24 153 aaKnown RBP10.05□□□□□ -0.8
CBWD1-226ENST00000618061 ZNF815PA8K554 130 aa10.05□□□□□ -0.8
CBWD1-226ENST00000618061 IGHV3-64A0A075B6Q5 118 aa10.04□□□□□ -0.8
CBWD1-226ENST00000618061 GIG44P09565 113 aaPredicted RBP10.04□□□□□ -0.8
CBWD1-226ENST00000618061 TSPEAR-AS2P59090 65 aa10.04□□□□□ -0.8
CBWD1-226ENST00000618061 IGLV4-3A0A075B6K6 122 aa10.04□□□□□ -0.8
CBWD1-226ENST00000618061 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.04□□□□□ -0.8
CBWD1-226ENST00000618061 IGKV2-29A2NJV5 120 aaPredicted RBP10.04□□□□□ -0.8
CBWD1-226ENST00000618061 VWFP04275 2813 aa10.04□□□□□ -0.8
CBWD1-226ENST00000618061 IGLV1-51P01701 117 aa10.03□□□□□ -0.8
CBWD1-226ENST00000618061 SMIM13P0DJ93 91 aa10.03□□□□□ -0.8
CBWD1-226ENST00000618061 Q6ZTI0 123 aa10.03□□□□□ -0.8
CBWD1-226ENST00000618061 FAM104AQ969W3 186 aa10.03□□□□□ -0.8
CBWD1-226ENST00000618061 ZNF479Q96JC4 524 aa10.03□□□□□ -0.8
CBWD1-226ENST00000618061 LINC00467Q9BRT7 94 aa10.03□□□□□ -0.8
CBWD1-226ENST00000618061 A0A0J9YXV3 536 aa10.02□□□□□ -0.8
CBWD1-226ENST00000618061 SCGB2A2Q13296 93 aa10.02□□□□□ -0.8
CBWD1-226ENST00000618061 BEAN1Q3B7T3 259 aa10.02□□□□□ -0.8
CBWD1-226ENST00000618061 RNASE8Q8TDE3 154 aaKnown RBP10.02□□□□□ -0.8
CBWD1-226ENST00000618061 SPXQ9BT56 116 aa10.02□□□□□ -0.8
CBWD1-226ENST00000618061 LINC01549A6NIU2 74 aa10.02□□□□□ -0.81
CBWD1-226ENST00000618061 INAFM1C9JVW0 142 aa10.02□□□□□ -0.81
CBWD1-226ENST00000618061 RS1O15537 224 aa10.02□□□□□ -0.81
CBWD1-226ENST00000618061 SCGB1D4Q6XE38 83 aa10.02□□□□□ -0.81
CBWD1-226ENST00000618061 CLUHP3Q96NS8 147 aa10.02□□□□□ -0.81
CBWD1-226ENST00000618061 TM2D2Q9BX73 214 aa10.02□□□□□ -0.81
CBWD1-226ENST00000618061 EDA2RQ9HAV5 297 aa10.02□□□□□ -0.81
CBWD1-226ENST00000618061 C19orf73Q9NVV2 129 aa10.02□□□□□ -0.81
CBWD1-226ENST00000618061 TRBV7-3A0A075B6L6 115 aa10.01□□□□□ -0.81
CBWD1-226ENST00000618061 SPATA3Q8NHX4 192 aa10.01□□□□□ -0.81
CBWD1-226ENST00000618061 VCX2Q9H322 139 aa10.01□□□□□ -0.81
CBWD1-226ENST00000618061 NOP10Q9NPE3 64 aaKnown RBP10.01□□□□□ -0.81
CBWD1-226ENST00000618061 CHCHD7Q9BUK0 85 aa10.01□□□□□ -0.81
CBWD1-226ENST00000618061 GAGE10A6NGK3 116 aa10□□□□□ -0.81
CBWD1-226ENST00000618061 NDUFA7O95182 113 aa10□□□□□ -0.81
CBWD1-226ENST00000618061 IL17DQ8TAD2 202 aa10□□□□□ -0.81
CBWD1-226ENST00000618061 RHODO00212 210 aa9.99□□□□□ -0.81
CBWD1-226ENST00000618061 HERVK_113P61574 105 aa9.99□□□□□ -0.81
CBWD1-226ENST00000618061 PAPPA-AS1Q5QFB9 102 aa9.99□□□□□ -0.81
CBWD1-226ENST00000618061 PIK3CD-AS1Q5SR53 167 aa9.99□□□□□ -0.81
CBWD1-226ENST00000618061 PTH2Q96A98 100 aa9.99□□□□□ -0.81
CBWD1-226ENST00000618061 A0A1W2PPM0 123 aa9.98□□□□□ -0.81
CBWD1-226ENST00000618061 PF4P02776 101 aa9.98□□□□□ -0.81
CBWD1-226ENST00000618061 ZNF22P17026 224 aaPredicted RBP9.98□□□□□ -0.81
CBWD1-226ENST00000618061 SAMD5Q5TGI4 173 aa9.98□□□□□ -0.81
CBWD1-226ENST00000618061 NFE4Q86UQ8 179 aa9.98□□□□□ -0.81
CBWD1-226ENST00000618061 FN1P02751 2386 aaKnown RBP9.98□□□□□ -0.81
CBWD1-226ENST00000618061 C12orf74Q32Q52 190 aa9.98□□□□□ -0.81
CBWD1-226ENST00000618061 TMEM263Q8WUH6 116 aaKnown RBP9.98□□□□□ -0.81
CBWD1-226ENST00000618061 TENM1Q9UKZ4 2725 aa9.98□□□□□ -0.81
CBWD1-226ENST00000618061 BAHCC1Q9P281 2608 aa9.97□□□□□ -0.81
CBWD1-226ENST00000618061 UBE2D4Q9Y2X8 147 aa9.97□□□□□ -0.81
CBWD1-226ENST00000618061 TMEM223A0PJW6 202 aa9.97□□□□□ -0.81
CBWD1-226ENST00000618061 GAGE12BA1L429 117 aa9.97□□□□□ -0.81
CBWD1-226ENST00000618061 J3QQQ9 107 aa9.97□□□□□ -0.81
CBWD1-226ENST00000618061 GAGE7O76087 117 aa9.97□□□□□ -0.81
CBWD1-226ENST00000618061 GAGE12FP0CL80 117 aa9.97□□□□□ -0.81
CBWD1-226ENST00000618061 GAGE12GP0CL81 117 aa9.97□□□□□ -0.81
CBWD1-226ENST00000618061 GAGE12IP0CL82 117 aa9.97□□□□□ -0.81
CBWD1-226ENST00000618061 SRSF9Q13242 221 aaKnown RBP eCLIP9.97□□□□□ -0.81
CBWD1-226ENST00000618061 TAL2Q16559 108 aa9.97□□□□□ -0.81
CBWD1-226ENST00000618061 Q6ZUT4 128 aa9.97□□□□□ -0.81
CBWD1-226ENST00000618061 PLAC8L1A1L4L8 177 aa9.96□□□□□ -0.82
CBWD1-226ENST00000618061 COTL1Q14019 142 aa9.96□□□□□ -0.82
CBWD1-226ENST00000618061 SPCS1Q9Y6A9 102 aa9.96□□□□□ -0.82
CBWD1-226ENST00000618061 TRRAPQ9Y4A5 3859 aa9.96□□□□□ -0.82
CBWD1-226ENST00000618061 A0A0J9YY99 117 aa9.95□□□□□ -0.82
CBWD1-226ENST00000618061 K7EP34 96 aa9.95□□□□□ -0.82
CBWD1-226ENST00000618061 CSNK1G2-AS1Q8NCQ2 148 aa9.95□□□□□ -0.82
CBWD1-226ENST00000618061 AMELXQ99217 191 aa9.95□□□□□ -0.82
CBWD1-226ENST00000618061 PYGO1Q9Y3Y4 419 aa9.95□□□□□ -0.82
CBWD1-226ENST00000618061 TRAV8-3A0A0A6YYJ7 113 aa9.95□□□□□ -0.82
CBWD1-226ENST00000618061 LGALS3P17931 250 aaKnown RBP9.95□□□□□ -0.82
CBWD1-226ENST00000618061 SLC25A29Q8N8R3 303 aa9.95□□□□□ -0.82
CBWD1-226ENST00000618061 DNAJC30Q96LL9 226 aa9.95□□□□□ -0.82
CBWD1-226ENST00000618061 C2CD3Q4AC94 2353 aa9.95□□□□□ -0.82
CBWD1-226ENST00000618061 NSD1Q96L73 2696 aaPredicted RBP9.95□□□□□ -0.82
CBWD1-226ENST00000618061 HIVEP1P15822 2718 aa9.94□□□□□ -0.82
CBWD1-226ENST00000618061 LOC100131303A0A0U1RQF7 123 aa9.94□□□□□ -0.82
CBWD1-226ENST00000618061 GAGE12JA6NER3 117 aa9.94□□□□□ -0.82
CBWD1-226ENST00000618061 A8MZ25 164 aa9.94□□□□□ -0.82
CBWD1-226ENST00000618061 GAGE4Q13068 117 aa9.94□□□□□ -0.82
CBWD1-226ENST00000618061 GAGE5Q13069 117 aa9.94□□□□□ -0.82
CBWD1-226ENST00000618061 GAGE13Q4V321 117 aa9.94□□□□□ -0.82
CBWD1-226ENST00000618061 NDUFA11Q86Y39 141 aa9.94□□□□□ -0.82
CBWD1-226ENST00000618061 LINC00482Q8N8I6 264 aa9.94□□□□□ -0.82
CBWD1-226ENST00000618061 NBEAL2Q6ZNJ1 2754 aa9.94□□□□□ -0.82
CBWD1-226ENST00000618061 IGLL5B9A064 214 aa9.94□□□□□ -0.82
CBWD1-226ENST00000618061 LINC00694P0DN24 101 aa9.94□□□□□ -0.82
CBWD1-226ENST00000618061 FABP2P12104 132 aa9.94□□□□□ -0.82
CBWD1-226ENST00000618061 GTF2H5Q6ZYL4 71 aa9.94□□□□□ -0.82
CBWD1-226ENST00000618061 TRGV2A0A075B6R0 118 aa9.93□□□□□ -0.82
CBWD1-226ENST00000618061 K7EQD1 137 aa9.93□□□□□ -0.82
CBWD1-226ENST00000618061 LEPROTO15243 131 aa9.92□□□□□ -0.82
CBWD1-226ENST00000618061 CMC4P56277 68 aaPredicted RBP9.92□□□□□ -0.82
CBWD1-226ENST00000618061 NTM-AS1Q6ZSK4 140 aa9.92□□□□□ -0.82
CBWD1-226ENST00000618061 TRAV4A0A0B4J268 109 aa9.92□□□□□ -0.82
CBWD1-226ENST00000618061 MRPS36P82909 103 aaKnown RBP9.92□□□□□ -0.82
CBWD1-226ENST00000618061 RRN3P1Q2M238 152 aa9.92□□□□□ -0.82
CBWD1-226ENST00000618061 SFTA2Q6UW10 78 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms