RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 ZNRF2Q8NHG8 242 aa11.32□□□□□ -0.6
NR1H3-235ENST00000616973 OPRPNQ99935 248 aaPredicted RBP11.32□□□□□ -0.6
NR1H3-235ENST00000616973 Q9UF83 564 aa11.32□□□□□ -0.6
NR1H3-235ENST00000616973 TRGV1A0A0A0MS02 117 aa11.31□□□□□ -0.6
NR1H3-235ENST00000616973 C9orf118A6NHY6 69 aa11.31□□□□□ -0.6
NR1H3-235ENST00000616973 INAFM1C9JVW0 142 aa11.31□□□□□ -0.6
NR1H3-235ENST00000616973 CCL25O15444 150 aa11.31□□□□□ -0.6
NR1H3-235ENST00000616973 GCSHP23434 173 aa11.31□□□□□ -0.6
NR1H3-235ENST00000616973 C16orf74Q96GX8 76 aa11.31□□□□□ -0.6
NR1H3-235ENST00000616973 CHCHD7Q9BUK0 85 aa11.31□□□□□ -0.6
NR1H3-235ENST00000616973 WFDC10AQ9H1F0 79 aa11.31□□□□□ -0.6
NR1H3-235ENST00000616973 TRAV4A0A0B4J268 109 aa11.31□□□□□ -0.6
NR1H3-235ENST00000616973 FXYD2P54710 66 aa11.31□□□□□ -0.6
NR1H3-235ENST00000616973 EMP1P54849 157 aa11.31□□□□□ -0.6
NR1H3-235ENST00000616973 CSNK1G2-AS1Q8NCQ2 148 aa11.31□□□□□ -0.6
NR1H3-235ENST00000616973 AMELXQ99217 191 aa11.31□□□□□ -0.6
NR1H3-235ENST00000616973 VCX2Q9H322 139 aa11.31□□□□□ -0.6
NR1H3-235ENST00000616973 CUBNO60494 3623 aa11.31□□□□□ -0.6
NR1H3-235ENST00000616973 MTORP42345 2549 aa11.3□□□□□ -0.6
NR1H3-235ENST00000616973 K7EP13 123 aa11.3□□□□□ -0.6
NR1H3-235ENST00000616973 SPANXA1Q9NS26 97 aa11.3□□□□□ -0.6
NR1H3-235ENST00000616973 TRBV10-1A0A0K0K1A3 114 aa11.29□□□□□ -0.6
NR1H3-235ENST00000616973 RPL35AP18077 110 aaKnown RBP11.29□□□□□ -0.6
NR1H3-235ENST00000616973 TMEM170BQ5T4T1 132 aa11.29□□□□□ -0.6
NR1H3-235ENST00000616973 FAM104AQ969W3 186 aa11.29□□□□□ -0.6
NR1H3-235ENST00000616973 TRBV7-3A0A075B6L6 115 aa11.29□□□□□ -0.6
NR1H3-235ENST00000616973 PLAC8L1A1L4L8 177 aa11.29□□□□□ -0.6
NR1H3-235ENST00000616973 ZNF815PA8K554 130 aa11.29□□□□□ -0.6
NR1H3-235ENST00000616973 SMIM13P0DJ93 91 aa11.29□□□□□ -0.6
NR1H3-235ENST00000616973 Q6ZTI0 123 aa11.29□□□□□ -0.6
NR1H3-235ENST00000616973 RBX1P62877 108 aa11.28□□□□□ -0.6
NR1H3-235ENST00000616973 OVOL2Q9BRP0 275 aa11.28□□□□□ -0.6
NR1H3-235ENST00000616973 CIDEAO60543 219 aa11.27□□□□□ -0.6
NR1H3-235ENST00000616973 INSL3P51460 131 aa11.27□□□□□ -0.6
NR1H3-235ENST00000616973 AMMECR1LQ6DCA0 310 aa11.27□□□□□ -0.6
NR1H3-235ENST00000616973 ZNF479Q96JC4 524 aa11.27□□□□□ -0.6
NR1H3-235ENST00000616973 HIST1H4GQ99525 98 aa11.27□□□□□ -0.6
NR1H3-235ENST00000616973 UBE2D4Q9Y2X8 147 aa11.27□□□□□ -0.6
NR1H3-235ENST00000616973 TMEM223A0PJW6 202 aa11.27□□□□□ -0.61
NR1H3-235ENST00000616973 K7EQD1 137 aa11.26□□□□□ -0.61
NR1H3-235ENST00000616973 ZNF22P17026 224 aaPredicted RBP11.26□□□□□ -0.61
NR1H3-235ENST00000616973 NOP10Q9NPE3 64 aaKnown RBP11.26□□□□□ -0.61
NR1H3-235ENST00000616973 MRPS36P82909 103 aaKnown RBP11.25□□□□□ -0.61
NR1H3-235ENST00000616973 RRN3P1Q2M238 152 aa11.25□□□□□ -0.61
NR1H3-235ENST00000616973 PHLDA1Q8WV24 401 aaPredicted RBP11.25□□□□□ -0.61
NR1H3-235ENST00000616973 TIMM21Q9BVV7 248 aa11.25□□□□□ -0.61
NR1H3-235ENST00000616973 FLNBO75369 2602 aaKnown RBP11.25□□□□□ -0.61
NR1H3-235ENST00000616973 A0A0J9YXV3 536 aa11.25□□□□□ -0.61
NR1H3-235ENST00000616973 LEPROTO15243 131 aa11.25□□□□□ -0.61
NR1H3-235ENST00000616973 RPL36AP83881 106 aaKnown RBP11.25□□□□□ -0.61
NR1H3-235ENST00000616973 RPL36ALQ969Q0 106 aaKnown RBP11.25□□□□□ -0.61
NR1H3-235ENST00000616973 IGHV3-38A0A0C4DH36 116 aa11.24□□□□□ -0.61
NR1H3-235ENST00000616973 H3BUT2 72 aa11.24□□□□□ -0.61
NR1H3-235ENST00000616973 CRLF1O75462 422 aa11.24□□□□□ -0.61
NR1H3-235ENST00000616973 SCGB1D4Q6XE38 83 aa11.24□□□□□ -0.61
NR1H3-235ENST00000616973 OTOGQ6ZRI0 2925 aa11.24□□□□□ -0.61
NR1H3-235ENST00000616973 J3QQQ9 107 aa11.23□□□□□ -0.61
NR1H3-235ENST00000616973 TSPEAR-AS2P59090 65 aa11.23□□□□□ -0.61
NR1H3-235ENST00000616973 C9orf66Q5T8R8 295 aa11.23□□□□□ -0.61
NR1H3-235ENST00000616973 DAZ4Q86SG3 579 aaKnown RBP11.23□□□□□ -0.61
NR1H3-235ENST00000616973 RAB37Q96AX2 223 aa11.23□□□□□ -0.61
NR1H3-235ENST00000616973 PLEKHB2Q96CS7 222 aa11.23□□□□□ -0.61
NR1H3-235ENST00000616973 DAZ3Q9NR90 486 aaKnown RBP11.23□□□□□ -0.61
NR1H3-235ENST00000616973 NHP2Q9NX24 153 aaKnown RBP11.23□□□□□ -0.61
NR1H3-235ENST00000616973 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.23□□□□□ -0.61
NR1H3-235ENST00000616973 IGKV2-29A2NJV5 120 aaPredicted RBP11.23□□□□□ -0.61
NR1H3-235ENST00000616973 CEMP1Q6PRD7 247 aaPredicted RBP11.23□□□□□ -0.61
NR1H3-235ENST00000616973 SLC25A29Q8N8R3 303 aa11.23□□□□□ -0.61
NR1H3-235ENST00000616973 SETXQ7Z333 2677 aaKnown RBP11.22□□□□□ -0.61
NR1H3-235ENST00000616973 A0A0J9YY99 117 aa11.22□□□□□ -0.61
NR1H3-235ENST00000616973 A0A1B0GWB2 263 aa11.22□□□□□ -0.61
NR1H3-235ENST00000616973 LGALS3P17931 250 aaKnown RBP11.22□□□□□ -0.61
NR1H3-235ENST00000616973 UBE2D3P61077 147 aa11.22□□□□□ -0.61
NR1H3-235ENST00000616973 UBE2D2P62837 147 aa11.22□□□□□ -0.61
NR1H3-235ENST00000616973 OR5A1Q8NGJ0 315 aa11.22□□□□□ -0.61
NR1H3-235ENST00000616973 SPANXB1Q9NS25 103 aaPredicted RBP11.22□□□□□ -0.61
NR1H3-235ENST00000616973 TINCRA0A1B0GVN0 87 aa11.21□□□□□ -0.61
NR1H3-235ENST00000616973 A0A1W2PPM0 123 aa11.21□□□□□ -0.62
NR1H3-235ENST00000616973 C12orf74Q32Q52 190 aa11.21□□□□□ -0.62
NR1H3-235ENST00000616973 GTF2H5Q6ZYL4 71 aa11.21□□□□□ -0.62
NR1H3-235ENST00000616973 TRBV6-4A0A1B0GX49 114 aa11.2□□□□□ -0.62
NR1H3-235ENST00000616973 GAGE12BA1L429 117 aa11.2□□□□□ -0.62
NR1H3-235ENST00000616973 GAGE10A6NGK3 116 aa11.2□□□□□ -0.62
NR1H3-235ENST00000616973 GAGE7O76087 117 aa11.2□□□□□ -0.62
NR1H3-235ENST00000616973 GAGE12FP0CL80 117 aa11.2□□□□□ -0.62
NR1H3-235ENST00000616973 GAGE12GP0CL81 117 aa11.2□□□□□ -0.62
NR1H3-235ENST00000616973 GAGE12IP0CL82 117 aa11.2□□□□□ -0.62
NR1H3-235ENST00000616973 TRGV2A0A075B6R0 118 aa11.19□□□□□ -0.62
NR1H3-235ENST00000616973 SAMD5Q5TGI4 173 aa11.19□□□□□ -0.62
NR1H3-235ENST00000616973 Q6ZUT4 128 aa11.19□□□□□ -0.62
NR1H3-235ENST00000616973 CITED1Q99966 193 aa11.19□□□□□ -0.62
NR1H3-235ENST00000616973 CSDC2Q9Y534 153 aaKnown RBP11.19□□□□□ -0.62
NR1H3-235ENST00000616973 SETD2Q9BYW2 2564 aaPredicted RBP11.19□□□□□ -0.62
NR1H3-235ENST00000616973 K7EP34 96 aa11.19□□□□□ -0.62
NR1H3-235ENST00000616973 K7ERJ3 54 aa11.19□□□□□ -0.62
NR1H3-235ENST00000616973 SRSF9Q13242 221 aaKnown RBP eCLIP11.19□□□□□ -0.62
NR1H3-235ENST00000616973 TMEM238LA0A1B0GVL6 79 aa11.18□□□□□ -0.62
NR1H3-235ENST00000616973 A6NJY4 79 aa11.18□□□□□ -0.62
NR1H3-235ENST00000616973 SBSPONQ8IVN8 264 aa11.18□□□□□ -0.62
NR1H3-235ENST00000616973 NAA38Q9BRA0 125 aaKnown RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms