RNA–Protein interactions for RNA: ENST00000616939.4

GPN1-212, Transcript of GPN-loop GTPase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GPN1, Length 1,832 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-212ENST00000616939 IGKV3-20P01619 116 aa11.35□□□□□ -0.59
GPN1-212ENST00000616939 COX7A2LO14548 114 aa11.34□□□□□ -0.59
GPN1-212ENST00000616939 CIRBPQ14011 172 aaKnown RBP11.34□□□□□ -0.59
GPN1-212ENST00000616939 FAM19A3Q7Z5A8 133 aa11.34□□□□□ -0.59
GPN1-212ENST00000616939 ASPMQ8IZT6 3477 aa11.34□□□□□ -0.59
GPN1-212ENST00000616939 MEIG1Q5JSS6 88 aa11.33□□□□□ -0.6
GPN1-212ENST00000616939 DUX3Q96PT4 197 aa11.33□□□□□ -0.6
GPN1-212ENST00000616939 CITED2Q99967 270 aaPredicted RBP11.33□□□□□ -0.6
GPN1-212ENST00000616939 IGLV5-39A0A0G2JS06 123 aa11.32□□□□□ -0.6
GPN1-212ENST00000616939 CEMP1Q6PRD7 247 aaPredicted RBP11.32□□□□□ -0.6
GPN1-212ENST00000616939 LINC00467Q9BRT7 94 aa11.32□□□□□ -0.6
GPN1-212ENST00000616939 DCHS1Q96JQ0 3298 aa11.32□□□□□ -0.6
GPN1-212ENST00000616939 IGHV4-61A0A0C4DH41 118 aa11.32□□□□□ -0.6
GPN1-212ENST00000616939 RBMY1A1P0DJD3 496 aaKnown RBP11.32□□□□□ -0.6
GPN1-212ENST00000616939 RBMY1CP0DJD4 496 aa11.32□□□□□ -0.6
GPN1-212ENST00000616939 ZNF415Q09FC8 603 aa11.32□□□□□ -0.6
GPN1-212ENST00000616939 RBMY1FQ15415 496 aaKnown RBP11.32□□□□□ -0.6
GPN1-212ENST00000616939 SDIM1Q6ZPB5 146 aa11.32□□□□□ -0.6
GPN1-212ENST00000616939 Q6ZSV7 163 aa11.32□□□□□ -0.6
GPN1-212ENST00000616939 LINC00308Q8TCZ7 52 aa11.32□□□□□ -0.6
GPN1-212ENST00000616939 SPTBN1Q01082 2364 aaKnown RBP11.31□□□□□ -0.6
GPN1-212ENST00000616939 TRACP01848 142 aa11.31□□□□□ -0.6
GPN1-212ENST00000616939 SHISA2Q6UWI4 295 aa11.31□□□□□ -0.6
GPN1-212ENST00000616939 ATP5G1P05496 136 aa11.3□□□□□ -0.6
GPN1-212ENST00000616939 LY6DQ14210 128 aa11.3□□□□□ -0.6
GPN1-212ENST00000616939 LINC00643Q86TS7 51 aa11.3□□□□□ -0.6
GPN1-212ENST00000616939 C10orf105Q8TEF2 133 aa11.3□□□□□ -0.6
GPN1-212ENST00000616939 LINC01587Q99440 93 aa11.3□□□□□ -0.6
GPN1-212ENST00000616939 A8MZ25 164 aa11.3□□□□□ -0.6
GPN1-212ENST00000616939 IGHV3-53P01767 116 aa11.3□□□□□ -0.6
GPN1-212ENST00000616939 NPC2P61916 151 aa11.3□□□□□ -0.6
GPN1-212ENST00000616939 RNASE13Q5GAN3 156 aaKnown RBP11.3□□□□□ -0.6
GPN1-212ENST00000616939 CDKN2A-AS1Q9UH64 79 aa11.3□□□□□ -0.6
GPN1-212ENST00000616939 GVINP1Q7Z2Y8 2422 aa11.3□□□□□ -0.6
GPN1-212ENST00000616939 PROK1P58294 105 aa11.29□□□□□ -0.6
GPN1-212ENST00000616939 HERVK_113P63121 156 aa11.29□□□□□ -0.6
GPN1-212ENST00000616939 FAM222AQ5U5X8 452 aa11.29□□□□□ -0.6
GPN1-212ENST00000616939 DOPEY2Q9Y3R5 2298 aa11.28□□□□□ -0.6
GPN1-212ENST00000616939 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.28□□□□□ -0.6
GPN1-212ENST00000616939 IGKV2-29A2NJV5 120 aaPredicted RBP11.28□□□□□ -0.6
GPN1-212ENST00000616939 BEAN1Q3B7T3 259 aa11.28□□□□□ -0.6
GPN1-212ENST00000616939 SMIM20Q8N5G0 67 aa11.28□□□□□ -0.6
GPN1-212ENST00000616939 LRBAP50851 2863 aa11.28□□□□□ -0.6
GPN1-212ENST00000616939 IGHV3-73A0A0B4J1V6 119 aa11.28□□□□□ -0.6
GPN1-212ENST00000616939 DAND5Q8N907 189 aa11.28□□□□□ -0.6
GPN1-212ENST00000616939 RS1O15537 224 aa11.27□□□□□ -0.61
GPN1-212ENST00000616939 CXCL5P42830 114 aa11.27□□□□□ -0.61
GPN1-212ENST00000616939 PTPRZ1P23471 2315 aaPredicted RBP11.27□□□□□ -0.61
GPN1-212ENST00000616939 TMEM95Q3KNT9 176 aa11.26□□□□□ -0.61
GPN1-212ENST00000616939 Q6ZSN1 163 aa11.26□□□□□ -0.61
GPN1-212ENST00000616939 CHCHD5Q9BSY4 110 aa11.26□□□□□ -0.61
GPN1-212ENST00000616939 PEMTQ9UBM1 199 aa11.26□□□□□ -0.61
GPN1-212ENST00000616939 DMXL1Q9Y485 3027 aa11.26□□□□□ -0.61
GPN1-212ENST00000616939 MSMBP08118 114 aa11.25□□□□□ -0.61
GPN1-212ENST00000616939 HERV-K104P63124 156 aa11.25□□□□□ -0.61
GPN1-212ENST00000616939 SYNJ2BPP57105 145 aa11.25□□□□□ -0.61
GPN1-212ENST00000616939 Q9H8V8 135 aa11.25□□□□□ -0.61
GPN1-212ENST00000616939 ATMQ13315 3056 aa11.25□□□□□ -0.61
GPN1-212ENST00000616939 TTC28Q96AY4 2481 aa11.24□□□□□ -0.61
GPN1-212ENST00000616939 FAM236AA0A1B0GUQ0 79 aa11.24□□□□□ -0.61
GPN1-212ENST00000616939 FAM236BA0A1B0GV22 79 aa11.24□□□□□ -0.61
GPN1-212ENST00000616939 CSMD1Q96PZ7 3565 aa11.24□□□□□ -0.61
GPN1-212ENST00000616939 IGHV3OR16-12A0A075B7B8 117 aa11.23□□□□□ -0.61
GPN1-212ENST00000616939 INAFM2P0DMQ5 153 aa11.23□□□□□ -0.61
GPN1-212ENST00000616939 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.23□□□□□ -0.61
GPN1-212ENST00000616939 C11orf72Q8NBR9 251 aa11.23□□□□□ -0.61
GPN1-212ENST00000616939 CSDC2Q9Y534 153 aaKnown RBP11.23□□□□□ -0.61
GPN1-212ENST00000616939 RBMY1BA6NDE4 496 aaKnown RBP11.23□□□□□ -0.61
GPN1-212ENST00000616939 RBMY1EA6NEQ0 496 aaKnown RBP11.23□□□□□ -0.61
GPN1-212ENST00000616939 KNCNA6PVL3 124 aa11.23□□□□□ -0.61
GPN1-212ENST00000616939 RBMY1DP0C7P1 496 aaKnown RBP11.23□□□□□ -0.61
GPN1-212ENST00000616939 LINC00242Q5T6M2 205 aa11.23□□□□□ -0.61
GPN1-212ENST00000616939 SOSTDC1Q6X4U4 206 aa11.23□□□□□ -0.61
GPN1-212ENST00000616939 SMCR5Q8TEV8 140 aa11.23□□□□□ -0.61
GPN1-212ENST00000616939 ZNF625Q96I27 306 aaPredicted RBP11.23□□□□□ -0.61
GPN1-212ENST00000616939 COL6A6A6NMZ7 2263 aa11.23□□□□□ -0.61
GPN1-212ENST00000616939 SMIM1B2RUZ4 78 aa11.22□□□□□ -0.61
GPN1-212ENST00000616939 PF4P02776 101 aa11.22□□□□□ -0.61
GPN1-212ENST00000616939 DGAT2L7PQ6IED9 249 aa11.22□□□□□ -0.61
GPN1-212ENST00000616939 C5orf38Q86SI9 138 aa11.22□□□□□ -0.61
GPN1-212ENST00000616939 C3orf22Q8N5N4 141 aa11.22□□□□□ -0.61
GPN1-212ENST00000616939 DUX5Q96PT3 197 aa11.22□□□□□ -0.61
GPN1-212ENST00000616939 Q9UF83 564 aa11.22□□□□□ -0.61
GPN1-212ENST00000616939 RIF1Q5UIP0 2472 aaKnown RBP11.21□□□□□ -0.61
GPN1-212ENST00000616939 C19orf84I3L1E1 186 aa11.21□□□□□ -0.61
GPN1-212ENST00000616939 UQCRQO14949 82 aa11.21□□□□□ -0.61
GPN1-212ENST00000616939 HOXD3P31249 432 aaPredicted RBP11.21□□□□□ -0.61
GPN1-212ENST00000616939 COX6A2Q02221 97 aa11.21□□□□□ -0.61
GPN1-212ENST00000616939 DAZ2Q13117 558 aaKnown RBP11.21□□□□□ -0.61
GPN1-212ENST00000616939 CFAP161Q6P656 301 aa11.21□□□□□ -0.61
GPN1-212ENST00000616939 DAZ4Q86SG3 579 aaKnown RBP11.21□□□□□ -0.61
GPN1-212ENST00000616939 UBE2E2Q96LR5 201 aa11.21□□□□□ -0.61
GPN1-212ENST00000616939 OVOL2Q9BRP0 275 aa11.21□□□□□ -0.61
GPN1-212ENST00000616939 DAZ3Q9NR90 486 aaKnown RBP11.21□□□□□ -0.61
GPN1-212ENST00000616939 BAALC-AS2P0C853 105 aa11.21□□□□□ -0.62
GPN1-212ENST00000616939 DEFB131AP59861 70 aa11.21□□□□□ -0.62
GPN1-212ENST00000616939 C10orf99Q6UWK7 81 aa11.21□□□□□ -0.62
GPN1-212ENST00000616939 C22orf24Q9Y442 160 aa11.21□□□□□ -0.62
GPN1-212ENST00000616939 LINC00526Q96FQ7 95 aa11.19□□□□□ -0.62
GPN1-212ENST00000616939 CCL19Q99731 98 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms