RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 TRBV6-5A0A0K0K1A5 114 aa10.2□□□□□ -0.78
UBXN1-218ENST00000616865 GAS8-AS1O95177 125 aa10.2□□□□□ -0.78
UBXN1-218ENST00000616865 TNFRSF6BO95407 300 aa10.2□□□□□ -0.78
UBXN1-218ENST00000616865 PMCHP20382 165 aa10.2□□□□□ -0.78
UBXN1-218ENST00000616865 GTSF1LQ9H1H1 148 aa10.2□□□□□ -0.78
UBXN1-218ENST00000616865 LAMTOR2Q9Y2Q5 125 aa10.2□□□□□ -0.78
UBXN1-218ENST00000616865 SDHAF1A6NFY7 115 aa10.19□□□□□ -0.78
UBXN1-218ENST00000616865 PHOX2AO14813 284 aa10.19□□□□□ -0.78
UBXN1-218ENST00000616865 LINC00694P0DN24 101 aa10.19□□□□□ -0.78
UBXN1-218ENST00000616865 SUMO2P61956 95 aaKnown RBP10.19□□□□□ -0.78
UBXN1-218ENST00000616865 TMEM97Q5BJF2 176 aa10.19□□□□□ -0.78
UBXN1-218ENST00000616865 LYPD5Q6UWN5 251 aa10.19□□□□□ -0.78
UBXN1-218ENST00000616865 NRACQ8N912 160 aa10.19□□□□□ -0.78
UBXN1-218ENST00000616865 MAP1LC3AQ9H492 121 aa10.19□□□□□ -0.78
UBXN1-218ENST00000616865 LINC00588Q9Y4M8 146 aa10.19□□□□□ -0.78
UBXN1-218ENST00000616865 COLCA2A8K830 154 aa10.18□□□□□ -0.78
UBXN1-218ENST00000616865 NPYP01303 97 aa10.18□□□□□ -0.78
UBXN1-218ENST00000616865 RAB5AP20339 215 aa10.18□□□□□ -0.78
UBXN1-218ENST00000616865 COTL1Q14019 142 aa10.18□□□□□ -0.78
UBXN1-218ENST00000616865 ESRGQ1W209 222 aa10.18□□□□□ -0.78
UBXN1-218ENST00000616865 Q8N1X5 172 aa10.18□□□□□ -0.78
UBXN1-218ENST00000616865 C20orf78Q9BR46 151 aa10.18□□□□□ -0.78
UBXN1-218ENST00000616865 TRAV8-6A0A0B4J262 113 aa10.17□□□□□ -0.78
UBXN1-218ENST00000616865 I3L3M4 83 aa10.17□□□□□ -0.78
UBXN1-218ENST00000616865 VCYO14598 125 aa10.17□□□□□ -0.78
UBXN1-218ENST00000616865 LOC389332A0A1B0GUA5 103 aa10.16□□□□□ -0.78
UBXN1-218ENST00000616865 FCER1GP30273 86 aa10.16□□□□□ -0.78
UBXN1-218ENST00000616865 TIRAPP58753 221 aa10.16□□□□□ -0.78
UBXN1-218ENST00000616865 KIR2DL4Q99706 377 aa10.16□□□□□ -0.78
UBXN1-218ENST00000616865 TMEM70Q9BUB7 260 aa10.16□□□□□ -0.78
UBXN1-218ENST00000616865 AMTP48728 403 aa10.15□□□□□ -0.78
UBXN1-218ENST00000616865 LELP1Q5T871 98 aa10.15□□□□□ -0.78
UBXN1-218ENST00000616865 SPATA12Q7Z6I5 190 aa10.15□□□□□ -0.78
UBXN1-218ENST00000616865 DEFB104AQ8WTQ1 72 aa10.15□□□□□ -0.78
UBXN1-218ENST00000616865 ALKBH7Q9BT30 221 aaPredicted RBP10.15□□□□□ -0.78
UBXN1-218ENST00000616865 SMIM2Q9BVW6 85 aa10.15□□□□□ -0.78
UBXN1-218ENST00000616865 MRPS16Q9Y3D3 137 aaKnown RBP10.15□□□□□ -0.78
UBXN1-218ENST00000616865 TRBV25-1A0A075B6N4 114 aa10.14□□□□□ -0.79
UBXN1-218ENST00000616865 IGHV1-24A0A0C4DH33 117 aa10.14□□□□□ -0.79
UBXN1-218ENST00000616865 TRGC2P03986 189 aa10.14□□□□□ -0.79
UBXN1-218ENST00000616865 POLR2KP53803 58 aaKnown RBP10.14□□□□□ -0.79
UBXN1-218ENST00000616865 KRTAP1-5Q9BYS1 174 aa10.14□□□□□ -0.79
UBXN1-218ENST00000616865 HERC1Q15751 4861 aa10.13□□□□□ -0.79
UBXN1-218ENST00000616865 TRBV6-8A0A0A6YYG3 113 aa10.13□□□□□ -0.79
UBXN1-218ENST00000616865 TRBV27A0A0K0K1C4 114 aa10.13□□□□□ -0.79
UBXN1-218ENST00000616865 TCAPO15273 167 aa10.13□□□□□ -0.79
UBXN1-218ENST00000616865 RPL32P62910 135 aaKnown RBP10.13□□□□□ -0.79
UBXN1-218ENST00000616865 TTC32Q5I0X7 151 aa10.13□□□□□ -0.79
UBXN1-218ENST00000616865 PRSS3P2Q8NHM4 247 aa10.13□□□□□ -0.79
UBXN1-218ENST00000616865 CHCHD5Q9BSY4 110 aa10.13□□□□□ -0.79
UBXN1-218ENST00000616865 Q9H8V8 135 aa10.13□□□□□ -0.79
UBXN1-218ENST00000616865 UBE2L6O14933 153 aa10.12□□□□□ -0.79
UBXN1-218ENST00000616865 TMEM243Q9BU79 118 aa10.12□□□□□ -0.79
UBXN1-218ENST00000616865 NXT2Q9NPJ8 142 aaKnown RBP10.12□□□□□ -0.79
UBXN1-218ENST00000616865 TMEM262E9PQX1 116 aa10.11□□□□□ -0.79
UBXN1-218ENST00000616865 TSHBP01222 138 aa10.11□□□□□ -0.79
UBXN1-218ENST00000616865 KRTAP10-2P60368 255 aa10.11□□□□□ -0.79
UBXN1-218ENST00000616865 Q8N8P6 123 aa10.11□□□□□ -0.79
UBXN1-218ENST00000616865 PRSS47A8MTI9 375 aa10.1□□□□□ -0.79
UBXN1-218ENST00000616865 SIVA1O15304 175 aa10.1□□□□□ -0.79
UBXN1-218ENST00000616865 PKIAP61925 76 aa10.1□□□□□ -0.79
UBXN1-218ENST00000616865 IQCJQ1A5X6 159 aa10.1□□□□□ -0.79
UBXN1-218ENST00000616865 NTM-AS1Q6ZSK4 140 aa10.1□□□□□ -0.79
UBXN1-218ENST00000616865 FA2HQ7L5A8 372 aa10.1□□□□□ -0.79
UBXN1-218ENST00000616865 UPK3BQ9BT76 320 aa10.1□□□□□ -0.79
UBXN1-218ENST00000616865 A0A087WX48 190 aa10.09□□□□□ -0.79
UBXN1-218ENST00000616865 BTF3P20290 206 aaKnown RBP10.09□□□□□ -0.79
UBXN1-218ENST00000616865 IFI27P40305 119 aaPredicted RBP10.09□□□□□ -0.79
UBXN1-218ENST00000616865 WFDC10BQ8IUB3 73 aa10.09□□□□□ -0.79
UBXN1-218ENST00000616865 RAB5BP61020 215 aa10.08□□□□□ -0.8
UBXN1-218ENST00000616865 GAGE6Q13070 117 aa10.08□□□□□ -0.8
UBXN1-218ENST00000616865 C18orf32Q8TCD1 76 aa10.08□□□□□ -0.8
UBXN1-218ENST00000616865 TMEM18Q96B42 140 aa10.08□□□□□ -0.8
UBXN1-218ENST00000616865 SMAGPQ0VAQ4 97 aa10.07□□□□□ -0.8
UBXN1-218ENST00000616865 ORMDL2Q53FV1 153 aa10.07□□□□□ -0.8
UBXN1-218ENST00000616865 AMMECR1LQ6DCA0 310 aa10.07□□□□□ -0.8
UBXN1-218ENST00000616865 BAGE3Q86Y29 109 aa10.07□□□□□ -0.8
UBXN1-218ENST00000616865 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.06□□□□□ -0.8
UBXN1-218ENST00000616865 TRAV9-2A0A087WT02 112 aa10.06□□□□□ -0.8
UBXN1-218ENST00000616865 IGKV2-29A2NJV5 120 aaPredicted RBP10.06□□□□□ -0.8
UBXN1-218ENST00000616865 C1orf196B1AJZ1 125 aa10.06□□□□□ -0.8
UBXN1-218ENST00000616865 K7EMI3 77 aa10.06□□□□□ -0.8
UBXN1-218ENST00000616865 IGHV3-30P01768 117 aa10.06□□□□□ -0.8
UBXN1-218ENST00000616865 IGHV3-33P01772 117 aa10.06□□□□□ -0.8
UBXN1-218ENST00000616865 IGHV3-30-3P0DP02 117 aa10.06□□□□□ -0.8
UBXN1-218ENST00000616865 IGHV3-30-5P0DP03 117 aa10.06□□□□□ -0.8
UBXN1-218ENST00000616865 G0S2P27469 103 aa10.06□□□□□ -0.8
UBXN1-218ENST00000616865 LAGE3Q14657 143 aa10.06□□□□□ -0.8
UBXN1-218ENST00000616865 RNASEKQ6P5S7 137 aaKnown RBP10.06□□□□□ -0.8
UBXN1-218ENST00000616865 H7C423 109 aa10.05□□□□□ -0.8
UBXN1-218ENST00000616865 NIT1Q86X76 327 aa10.05□□□□□ -0.8
UBXN1-218ENST00000616865 TMEM101Q96IK0 257 aa10.05□□□□□ -0.8
UBXN1-218ENST00000616865 CHCHD7Q9BUK0 85 aa10.05□□□□□ -0.8
UBXN1-218ENST00000616865 LINC00614P0C842 121 aa10.04□□□□□ -0.8
UBXN1-218ENST00000616865 ESDP10768 282 aa10.04□□□□□ -0.8
UBXN1-218ENST00000616865 DGAT2L7PQ6IED9 249 aa10.04□□□□□ -0.8
UBXN1-218ENST00000616865 AP5S1Q9NUS5 200 aa10.04□□□□□ -0.8
UBXN1-218ENST00000616865 FAT1Q14517 4588 aa10.04□□□□□ -0.8
UBXN1-218ENST00000616865 DNAH10OSP0CZ25 163 aa10.03□□□□□ -0.8
UBXN1-218ENST00000616865 LINC01556Q5JQF7 62 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms