RNA–Protein interactions for RNA: ENST00000616545.4

TARDBP-217, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-217ENST00000616545 TRBV25-1A0A075B6N4 114 aa8.08□□□□□ -1.12
TARDBP-217ENST00000616545 TRBV6-8A0A0A6YYG3 113 aa8.08□□□□□ -1.12
TARDBP-217ENST00000616545 IGHV1-24A0A0C4DH33 117 aa8.08□□□□□ -1.12
TARDBP-217ENST00000616545 C3orf84H3BNL1 204 aa8.08□□□□□ -1.12
TARDBP-217ENST00000616545 S100A6P06703 90 aa8.08□□□□□ -1.12
TARDBP-217ENST00000616545 IQCJQ1A5X6 159 aa8.08□□□□□ -1.12
TARDBP-217ENST00000616545 LELP1Q5T871 98 aa8.08□□□□□ -1.12
TARDBP-217ENST00000616545 TSHBP01222 138 aa8.07□□□□□ -1.12
TARDBP-217ENST00000616545 ESDP10768 282 aa8.07□□□□□ -1.12
TARDBP-217ENST00000616545 AMTP48728 403 aa8.07□□□□□ -1.12
TARDBP-217ENST00000616545 CCL18P55774 89 aa8.07□□□□□ -1.12
TARDBP-217ENST00000616545 RNASEKQ6P5S7 137 aaKnown RBP8.07□□□□□ -1.12
TARDBP-217ENST00000616545 LYPD5Q6UWN5 251 aa8.07□□□□□ -1.12
TARDBP-217ENST00000616545 TRAV8-6A0A0B4J262 113 aa8.06□□□□□ -1.12
TARDBP-217ENST00000616545 IGHV3-38A0A0C4DH36 116 aa8.06□□□□□ -1.12
TARDBP-217ENST00000616545 HSBP1O75506 76 aa8.06□□□□□ -1.12
TARDBP-217ENST00000616545 NDUFA6P56556 154 aa8.06□□□□□ -1.12
TARDBP-217ENST00000616545 TMEM243Q9BU79 118 aa8.06□□□□□ -1.12
TARDBP-217ENST00000616545 APLNQ9ULZ1 77 aa8.06□□□□□ -1.12
TARDBP-217ENST00000616545 SERF1AO75920 110 aa8.05□□□□□ -1.12
TARDBP-217ENST00000616545 NPSP0C0P6 89 aa8.05□□□□□ -1.12
TARDBP-217ENST00000616545 NTM-AS1Q6ZSK4 140 aa8.05□□□□□ -1.12
TARDBP-217ENST00000616545 C20orf203Q8NBC4 194 aa8.05□□□□□ -1.12
TARDBP-217ENST00000616545 URB1-AS1Q96HZ7 61 aa8.05□□□□□ -1.12
TARDBP-217ENST00000616545 CYSLTR1Q9Y271 337 aa8.05□□□□□ -1.12
TARDBP-217ENST00000616545 COL7A1Q02388 2944 aa8.05□□□□□ -1.12
TARDBP-217ENST00000616545 PRKDCP78527 4128 aaKnown RBP8.05□□□□□ -1.12
TARDBP-217ENST00000616545 UBE2L6O14933 153 aa8.04□□□□□ -1.12
TARDBP-217ENST00000616545 HBDP02042 147 aa8.04□□□□□ -1.12
TARDBP-217ENST00000616545 PACRGQ96M98 296 aaPredicted RBP8.04□□□□□ -1.12
TARDBP-217ENST00000616545 CHCHD7Q9BUK0 85 aa8.04□□□□□ -1.12
TARDBP-217ENST00000616545 TIMM21Q9BVV7 248 aa8.04□□□□□ -1.12
TARDBP-217ENST00000616545 ZNF25P17030 456 aaPredicted RBP8.03□□□□□ -1.12
TARDBP-217ENST00000616545 ESRGQ1W209 222 aa8.03□□□□□ -1.12
TARDBP-217ENST00000616545 UPK3BQ9BT76 320 aa8.03□□□□□ -1.12
TARDBP-217ENST00000616545 SPANXA1Q9NS26 97 aa8.03□□□□□ -1.12
TARDBP-217ENST00000616545 MRPS16Q9Y3D3 137 aaKnown RBP8.03□□□□□ -1.12
TARDBP-217ENST00000616545 PYGO1Q9Y3Y4 419 aa8.03□□□□□ -1.12
TARDBP-217ENST00000616545 CSDC2Q9Y534 153 aaKnown RBP8.03□□□□□ -1.12
TARDBP-217ENST00000616545 HUWE1Q7Z6Z7 4374 aaKnown RBP8.03□□□□□ -1.12
TARDBP-217ENST00000616545 A0A1B0GUV1 79 aa8.02□□□□□ -1.13
TARDBP-217ENST00000616545 K7EP13 123 aa8.02□□□□□ -1.13
TARDBP-217ENST00000616545 BTF3P20290 206 aaKnown RBP8.02□□□□□ -1.13
TARDBP-217ENST00000616545 LINC00310P59036 64 aa8.02□□□□□ -1.13
TARDBP-217ENST00000616545 C2orf66Q6UXQ4 117 aa8.02□□□□□ -1.13
TARDBP-217ENST00000616545 MRPL52Q86TS9 123 aaKnown RBP8.02□□□□□ -1.13
TARDBP-217ENST00000616545 TOMM6Q96B49 74 aa8.02□□□□□ -1.13
TARDBP-217ENST00000616545 CHCHD5Q9BSY4 110 aa8.02□□□□□ -1.13
TARDBP-217ENST00000616545 DNAH9Q9NYC9 4486 aa8.01□□□□□ -1.13
TARDBP-217ENST00000616545 ATP5LO75964 103 aa8.01□□□□□ -1.13
TARDBP-217ENST00000616545 PAPPA-AS1Q5QFB9 102 aa8.01□□□□□ -1.13
TARDBP-217ENST00000616545 ZFAND6Q6FIF0 208 aa8.01□□□□□ -1.13
TARDBP-217ENST00000616545 ERASQ7Z444 233 aa8.01□□□□□ -1.13
TARDBP-217ENST00000616545 TIMM17AQ99595 171 aa8.01□□□□□ -1.13
TARDBP-217ENST00000616545 C5orf52A6NGY3 159 aa8□□□□□ -1.13
TARDBP-217ENST00000616545 CASC10Q5T4H9 136 aa8□□□□□ -1.13
TARDBP-217ENST00000616545 AMMECR1LQ6DCA0 310 aa8□□□□□ -1.13
TARDBP-217ENST00000616545 TMEM141Q96I45 108 aa8□□□□□ -1.13
TARDBP-217ENST00000616545 TMEM101Q96IK0 257 aa8□□□□□ -1.13
TARDBP-217ENST00000616545 HSPB8Q9UJY1 196 aa8□□□□□ -1.13
TARDBP-217ENST00000616545 LINC00588Q9Y4M8 146 aa8□□□□□ -1.13
TARDBP-217ENST00000616545 A0A087WX48 190 aa7.99□□□□□ -1.13
TARDBP-217ENST00000616545 A0A096LNJ9 63 aa7.99□□□□□ -1.13
TARDBP-217ENST00000616545 NUPR1O60356 82 aa7.99□□□□□ -1.13
TARDBP-217ENST00000616545 LEPROTL1O95214 131 aa7.99□□□□□ -1.13
TARDBP-217ENST00000616545 FGF6P10767 208 aa7.99□□□□□ -1.13
TARDBP-217ENST00000616545 S100A2P29034 98 aa7.99□□□□□ -1.13
TARDBP-217ENST00000616545 MRPS36P82909 103 aaKnown RBP7.99□□□□□ -1.13
TARDBP-217ENST00000616545 PDZD11Q5EBL8 140 aa7.99□□□□□ -1.13
TARDBP-217ENST00000616545 DGAT2L7PQ6IED9 249 aa7.99□□□□□ -1.13
TARDBP-217ENST00000616545 UBE2DNLQ8IWF7 75 aa7.99□□□□□ -1.13
TARDBP-217ENST00000616545 SCGB3A1Q96QR1 104 aa7.99□□□□□ -1.13
TARDBP-217ENST00000616545 UBE2D4Q9Y2X8 147 aa7.99□□□□□ -1.13
TARDBP-217ENST00000616545 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.98□□□□□ -1.13
TARDBP-217ENST00000616545 IGKV2-29A2NJV5 120 aaPredicted RBP7.98□□□□□ -1.13
TARDBP-217ENST00000616545 IGIPA6NJ69 53 aa7.98□□□□□ -1.13
TARDBP-217ENST00000616545 TMEM262E9PQX1 116 aa7.98□□□□□ -1.13
TARDBP-217ENST00000616545 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.98□□□□□ -1.13
TARDBP-217ENST00000616545 DNAH10OSP0CZ25 163 aa7.98□□□□□ -1.13
TARDBP-217ENST00000616545 SNRPEP62304 92 aaKnown RBP7.98□□□□□ -1.13
TARDBP-217ENST00000616545 LINC01556Q5JQF7 62 aa7.98□□□□□ -1.13
TARDBP-217ENST00000616545 LGALS9CQ6DKI2 356 aa7.98□□□□□ -1.13
TARDBP-217ENST00000616545 HIST3H2BBQ8N257 126 aa7.98□□□□□ -1.13
TARDBP-217ENST00000616545 FAM19A2Q8N3H0 131 aa7.98□□□□□ -1.13
TARDBP-217ENST00000616545 OR5A1Q8NGJ0 315 aa7.98□□□□□ -1.13
TARDBP-217ENST00000616545 DEFB104AQ8WTQ1 72 aa7.98□□□□□ -1.13
TARDBP-217ENST00000616545 TMA7Q9Y2S6 64 aaKnown RBP7.98□□□□□ -1.13
TARDBP-217ENST00000616545 TRAV9-2A0A087WT02 112 aa7.97□□□□□ -1.13
TARDBP-217ENST00000616545 SIVA1O15304 175 aa7.97□□□□□ -1.13
TARDBP-217ENST00000616545 RPL39P62891 51 aaKnown RBP7.97□□□□□ -1.13
TARDBP-217ENST00000616545 GAGE6Q13070 117 aa7.97□□□□□ -1.13
TARDBP-217ENST00000616545 PMCHL1Q16048 86 aa7.97□□□□□ -1.13
TARDBP-217ENST00000616545 Q6ZN92 141 aa7.97□□□□□ -1.13
TARDBP-217ENST00000616545 RBX1P62877 108 aa7.96□□□□□ -1.14
TARDBP-217ENST00000616545 C10orf126Q8N4M7 172 aa7.96□□□□□ -1.14
TARDBP-217ENST00000616545 IFI27L1Q96BM0 104 aa7.96□□□□□ -1.14
TARDBP-217ENST00000616545 CCL25O15444 150 aa7.95□□□□□ -1.14
TARDBP-217ENST00000616545 WFDC10BQ8IUB3 73 aa7.95□□□□□ -1.14
TARDBP-217ENST00000616545 ZNF664Q8N3J9 261 aa7.95□□□□□ -1.14
TARDBP-217ENST00000616545 VCX2Q9H322 139 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms