RNA–Protein interactions for RNA: ENST00000616288.4

PPP4R3B-205, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-205ENST00000616288 FAM223AQ8IWN6 122 aa10.2□□□□□ -0.78
PPP4R3B-205ENST00000616288 PCSK5Q92824 1860 aa10.2□□□□□ -0.78
PPP4R3B-205ENST00000616288 IGHV1-69P01742 117 aa10.19□□□□□ -0.78
PPP4R3B-205ENST00000616288 LENEPQ9Y5L5 61 aa10.19□□□□□ -0.78
PPP4R3B-205ENST00000616288 PIP4P1Q86T03 277 aa10.19□□□□□ -0.78
PPP4R3B-205ENST00000616288 U3KQE9 123 aa10.19□□□□□ -0.78
PPP4R3B-205ENST00000616288 TIMM17BO60830 172 aa10.19□□□□□ -0.78
PPP4R3B-205ENST00000616288 C6orf226Q5I0X4 101 aa10.19□□□□□ -0.78
PPP4R3B-205ENST00000616288 UPK3BQ9BT76 320 aa10.19□□□□□ -0.78
PPP4R3B-205ENST00000616288 IGIPA6NJ69 53 aa10.18□□□□□ -0.78
PPP4R3B-205ENST00000616288 IGLV4-3A0A075B6K6 122 aa10.18□□□□□ -0.78
PPP4R3B-205ENST00000616288 ADAMTSL4-AS1Q5T5F5 129 aa10.18□□□□□ -0.78
PPP4R3B-205ENST00000616288 FAM110DQ8TAY7 271 aaPredicted RBP10.18□□□□□ -0.78
PPP4R3B-205ENST00000616288 NDUFC2-KCTD14E9PQ53 114 aa10.18□□□□□ -0.78
PPP4R3B-205ENST00000616288 CRYGDP07320 174 aa10.18□□□□□ -0.78
PPP4R3B-205ENST00000616288 PIK3CD-AS1Q5SR53 167 aa10.17□□□□□ -0.78
PPP4R3B-205ENST00000616288 IGF2-ASQ6U949 168 aa10.17□□□□□ -0.78
PPP4R3B-205ENST00000616288 LINC00308Q8TCZ7 52 aa10.17□□□□□ -0.78
PPP4R3B-205ENST00000616288 CDKN2A-AS1Q9UH64 79 aa10.17□□□□□ -0.78
PPP4R3B-205ENST00000616288 CELSR3Q9NYQ7 3312 aa10.17□□□□□ -0.78
PPP4R3B-205ENST00000616288 ZNF672Q499Z4 452 aaPredicted RBP10.17□□□□□ -0.78
PPP4R3B-205ENST00000616288 ANKHD1Q8IWZ3 2542 aaKnown RBP10.17□□□□□ -0.78
PPP4R3B-205ENST00000616288 PRR9Q5T870 116 aa10.17□□□□□ -0.78
PPP4R3B-205ENST00000616288 NBL1P41271 181 aa10.16□□□□□ -0.78
PPP4R3B-205ENST00000616288 LY6DQ14210 128 aa10.16□□□□□ -0.78
PPP4R3B-205ENST00000616288 MRPL53Q96EL3 112 aaKnown RBP10.16□□□□□ -0.78
PPP4R3B-205ENST00000616288 CSPG4Q6UVK1 2322 aa10.16□□□□□ -0.78
PPP4R3B-205ENST00000616288 IGLV1-47P01700 117 aa10.16□□□□□ -0.78
PPP4R3B-205ENST00000616288 SOSTDC1Q6X4U4 206 aa10.16□□□□□ -0.78
PPP4R3B-205ENST00000616288 POM121L12Q8N7R1 296 aa10.16□□□□□ -0.78
PPP4R3B-205ENST00000616288 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.15□□□□□ -0.78
PPP4R3B-205ENST00000616288 HIST2H2BCQ6DN03 193 aa10.15□□□□□ -0.78
PPP4R3B-205ENST00000616288 HIST2H2BDQ6DRA6 164 aa10.15□□□□□ -0.78
PPP4R3B-205ENST00000616288 VSIG2Q96IQ7 327 aa10.15□□□□□ -0.78
PPP4R3B-205ENST00000616288 LINC00574Q9H8X3 128 aa10.15□□□□□ -0.78
PPP4R3B-205ENST00000616288 LAMA1P25391 3075 aa10.15□□□□□ -0.78
PPP4R3B-205ENST00000616288 SMIM26A0A096LP01 95 aa10.15□□□□□ -0.78
PPP4R3B-205ENST00000616288 IGHG3P01860 377 aa10.15□□□□□ -0.78
PPP4R3B-205ENST00000616288 ITLN2Q8WWU7 325 aaPredicted RBP10.15□□□□□ -0.78
PPP4R3B-205ENST00000616288 H0YGX0 51 aa10.15□□□□□ -0.79
PPP4R3B-205ENST00000616288 DYNLRB2Q8TF09 96 aa10.14□□□□□ -0.79
PPP4R3B-205ENST00000616288 TRBV12-3P01733 135 aa10.14□□□□□ -0.79
PPP4R3B-205ENST00000616288 FAM19A4Q96LR4 140 aa10.14□□□□□ -0.79
PPP4R3B-205ENST00000616288 TRIOO75962 3097 aa10.13□□□□□ -0.79
PPP4R3B-205ENST00000616288 EBI3Q14213 229 aa10.13□□□□□ -0.79
PPP4R3B-205ENST00000616288 MIR7-3HGQ8N6C7 128 aa10.13□□□□□ -0.79
PPP4R3B-205ENST00000616288 POLR2KP53803 58 aaKnown RBP10.13□□□□□ -0.79
PPP4R3B-205ENST00000616288 TSHBP01222 138 aa10.12□□□□□ -0.79
PPP4R3B-205ENST00000616288 DEFB124Q8NES8 71 aa10.12□□□□□ -0.79
PPP4R3B-205ENST00000616288 IGHV7-81A0A0B4J1V7 117 aa10.12□□□□□ -0.79
PPP4R3B-205ENST00000616288 F8WEM9 126 aa10.12□□□□□ -0.79
PPP4R3B-205ENST00000616288 MINOS1Q5TGZ0 78 aa10.12□□□□□ -0.79
PPP4R3B-205ENST00000616288 SERP1Q9Y6X1 66 aa10.12□□□□□ -0.79
PPP4R3B-205ENST00000616288 HILS1P60008 231 aa10.12□□□□□ -0.79
PPP4R3B-205ENST00000616288 TRGV1A0A0A0MS02 117 aa10.11□□□□□ -0.79
PPP4R3B-205ENST00000616288 RETNQ9HD89 108 aa10.11□□□□□ -0.79
PPP4R3B-205ENST00000616288 FAM223BA6NKX1 122 aa10.11□□□□□ -0.79
PPP4R3B-205ENST00000616288 E7EQL1 145 aa10.11□□□□□ -0.79
PPP4R3B-205ENST00000616288 Q6JHZ5 121 aa10.11□□□□□ -0.79
PPP4R3B-205ENST00000616288 ZFAND2AQ8N6M9 145 aa10.11□□□□□ -0.79
PPP4R3B-205ENST00000616288 TRGV2A0A075B6R0 118 aa10.1□□□□□ -0.79
PPP4R3B-205ENST00000616288 KAAG1Q9UBP8 84 aa10.1□□□□□ -0.79
PPP4R3B-205ENST00000616288 TRBV27A0A0K0K1C4 114 aa10.1□□□□□ -0.79
PPP4R3B-205ENST00000616288 LINC01546A6NGU7 62 aa10.1□□□□□ -0.79
PPP4R3B-205ENST00000616288 SMCR5Q8TEV8 140 aa10.1□□□□□ -0.79
PPP4R3B-205ENST00000616288 IGHV4-4A0A075B6R2 117 aa10.09□□□□□ -0.79
PPP4R3B-205ENST00000616288 RNASE3P12724 160 aaKnown RBP10.09□□□□□ -0.79
PPP4R3B-205ENST00000616288 XCL1P47992 114 aa10.09□□□□□ -0.79
PPP4R3B-205ENST00000616288 LINC00846Q9NV44 126 aa10.09□□□□□ -0.79
PPP4R3B-205ENST00000616288 XCL2Q9UBD3 114 aa10.09□□□□□ -0.79
PPP4R3B-205ENST00000616288 SCXQ7RTU7 201 aa10.09□□□□□ -0.79
PPP4R3B-205ENST00000616288 C20orf173Q96LM9 149 aa10.09□□□□□ -0.79
PPP4R3B-205ENST00000616288 ATRXP46100 2492 aa10.09□□□□□ -0.79
PPP4R3B-205ENST00000616288 COX7B2Q8TF08 81 aa10.09□□□□□ -0.79
PPP4R3B-205ENST00000616288 PIEZO2Q9H5I5 2752 aa10.09□□□□□ -0.79
PPP4R3B-205ENST00000616288 LINC00336Q6ZUF6 198 aa10.09□□□□□ -0.79
PPP4R3B-205ENST00000616288 SAA4P35542 130 aa10.08□□□□□ -0.8
PPP4R3B-205ENST00000616288 GPHB5Q86YW7 130 aa10.08□□□□□ -0.8
PPP4R3B-205ENST00000616288 COL6A3P12111 3177 aa10.08□□□□□ -0.8
PPP4R3B-205ENST00000616288 MED14OSP0DP75 135 aa10.08□□□□□ -0.8
PPP4R3B-205ENST00000616288 JMJD7-PLA2G4BH0Y9G9 81 aa10.08□□□□□ -0.8
PPP4R3B-205ENST00000616288 MRPL55Q7Z7F7 128 aaKnown RBP10.08□□□□□ -0.8
PPP4R3B-205ENST00000616288 EDN2P20800 178 aa10.07□□□□□ -0.8
PPP4R3B-205ENST00000616288 FAM19A1Q7Z5A9 133 aa10.07□□□□□ -0.8
PPP4R3B-205ENST00000616288 CLPSL1A2RUU4 121 aa10.07□□□□□ -0.8
PPP4R3B-205ENST00000616288 BRD3OSQ6XYD6 125 aa10.07□□□□□ -0.8
PPP4R3B-205ENST00000616288 MINOS1-NBL1R4GNA1 71 aa10.07□□□□□ -0.8
PPP4R3B-205ENST00000616288 A0A0J9YX75 114 aa10.06□□□□□ -0.8
PPP4R3B-205ENST00000616288 NPBQ8NG41 125 aa10.06□□□□□ -0.8
PPP4R3B-205ENST00000616288 PTPN13Q12923 2485 aa10.06□□□□□ -0.8
PPP4R3B-205ENST00000616288 M0QY20 66 aa10.06□□□□□ -0.8
PPP4R3B-205ENST00000616288 UNQ9165/PRO28630Q6UXU0 137 aa10.06□□□□□ -0.8
PPP4R3B-205ENST00000616288 PSMG3-AS1Q96PY0 264 aa10.06□□□□□ -0.8
PPP4R3B-205ENST00000616288 IGHV4OR15-8A0A075B7B6 117 aa10.06□□□□□ -0.8
PPP4R3B-205ENST00000616288 A0A087WW49 117 aa10.06□□□□□ -0.8
PPP4R3B-205ENST00000616288 C5orf38Q86SI9 138 aa10.06□□□□□ -0.8
PPP4R3B-205ENST00000616288 FRYLO94915 3013 aa10.06□□□□□ -0.8
PPP4R3B-205ENST00000616288 UBE2E2Q96LR5 201 aa10.06□□□□□ -0.8
PPP4R3B-205ENST00000616288 NDUFA4O00483 81 aa10.05□□□□□ -0.8
PPP4R3B-205ENST00000616288 COX8CQ7Z4L0 72 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms