RNA–Protein interactions for RNA: ENST00000616237.1

LHX1-202, Transcript of LIM homeobox 1, humanhuman

TSL 1 (best)

Gene LHX1, Length 1,364 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1-202ENST00000616237 Q0VG73 95 aa11.22□□□□□ -0.61
LHX1-202ENST00000616237 NTN5Q8WTR8 489 aaPredicted RBP11.22□□□□□ -0.61
LHX1-202ENST00000616237 PRR34Q9NV39 138 aa11.22□□□□□ -0.61
LHX1-202ENST00000616237 GCSHP23434 173 aa11.21□□□□□ -0.61
LHX1-202ENST00000616237 XGP55808 180 aa11.21□□□□□ -0.61
LHX1-202ENST00000616237 C20orf203Q8NBC4 194 aa11.21□□□□□ -0.61
LHX1-202ENST00000616237 TMEM243Q9BU79 118 aa11.21□□□□□ -0.61
LHX1-202ENST00000616237 ABCA13Q86UQ4 5058 aa11.21□□□□□ -0.61
LHX1-202ENST00000616237 PCLOQ9Y6V0 5065 aa11.21□□□□□ -0.61
LHX1-202ENST00000616237 IGLV4-60A0A075B6I1 120 aa11.2□□□□□ -0.62
LHX1-202ENST00000616237 SMIM27A0A1W2PRY6 76 aa11.2□□□□□ -0.62
LHX1-202ENST00000616237 CRPP02741 224 aa11.2□□□□□ -0.62
LHX1-202ENST00000616237 RAB4AP20338 218 aa11.2□□□□□ -0.62
LHX1-202ENST00000616237 COTL1Q14019 142 aa11.2□□□□□ -0.62
LHX1-202ENST00000616237 CLPSL2Q6UWE3 100 aa11.2□□□□□ -0.62
LHX1-202ENST00000616237 AMN1Q8IY45 258 aa11.2□□□□□ -0.62
LHX1-202ENST00000616237 LINC00269Q8N2A0 174 aa11.2□□□□□ -0.62
LHX1-202ENST00000616237 NAT8BQ9UHF3 227 aa11.2□□□□□ -0.62
LHX1-202ENST00000616237 TRBV6-5A0A0K0K1A5 114 aa11.19□□□□□ -0.62
LHX1-202ENST00000616237 SDHAF1A6NFY7 115 aa11.19□□□□□ -0.62
LHX1-202ENST00000616237 RPS10P46783 165 aaKnown RBP11.19□□□□□ -0.62
LHX1-202ENST00000616237 AMTP48728 403 aa11.19□□□□□ -0.62
LHX1-202ENST00000616237 KRTAP26-1Q6PEX3 210 aa11.19□□□□□ -0.62
LHX1-202ENST00000616237 C1orf43Q9BWL3 253 aa11.19□□□□□ -0.62
LHX1-202ENST00000616237 A0A1B0GUV1 79 aa11.18□□□□□ -0.62
LHX1-202ENST00000616237 RIGQ13278 110 aa11.18□□□□□ -0.62
LHX1-202ENST00000616237 MIAQ16674 131 aa11.18□□□□□ -0.62
LHX1-202ENST00000616237 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.17□□□□□ -0.62
LHX1-202ENST00000616237 IFITM2Q01629 132 aa11.17□□□□□ -0.62
LHX1-202ENST00000616237 RAB14P61106 215 aa11.16□□□□□ -0.62
LHX1-202ENST00000616237 CLLU1Q5K131 121 aa11.16□□□□□ -0.62
LHX1-202ENST00000616237 SMKR1H3BMG3 65 aa11.16□□□□□ -0.62
LHX1-202ENST00000616237 NCR2O95944 276 aa11.16□□□□□ -0.62
LHX1-202ENST00000616237 REG3AQ06141 175 aa11.16□□□□□ -0.62
LHX1-202ENST00000616237 Q8N1X5 172 aa11.16□□□□□ -0.62
LHX1-202ENST00000616237 MRAP2Q96G30 205 aa11.16□□□□□ -0.62
LHX1-202ENST00000616237 TMEM70Q9BUB7 260 aa11.16□□□□□ -0.62
LHX1-202ENST00000616237 UBE2L6O14933 153 aa11.15□□□□□ -0.63
LHX1-202ENST00000616237 POLR2KP53803 58 aaKnown RBP11.15□□□□□ -0.63
LHX1-202ENST00000616237 FAM30AQ9NZY2 134 aa11.15□□□□□ -0.63
LHX1-202ENST00000616237 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.14□□□□□ -0.63
LHX1-202ENST00000616237 IGKV2-29A2NJV5 120 aaPredicted RBP11.14□□□□□ -0.63
LHX1-202ENST00000616237 I3L3M4 83 aa11.14□□□□□ -0.63
LHX1-202ENST00000616237 TSHBP01222 138 aa11.14□□□□□ -0.63
LHX1-202ENST00000616237 HLA-DQA1P01909 254 aa11.14□□□□□ -0.63
LHX1-202ENST00000616237 PMCHP20382 165 aa11.14□□□□□ -0.63
LHX1-202ENST00000616237 CAMPP49913 170 aa11.14□□□□□ -0.63
LHX1-202ENST00000616237 HAMPP81172 84 aa11.14□□□□□ -0.63
LHX1-202ENST00000616237 NRACQ8N912 160 aa11.14□□□□□ -0.63
LHX1-202ENST00000616237 ST20Q9HBF5 79 aa11.14□□□□□ -0.63
LHX1-202ENST00000616237 IGLV10-54A0A075B6I4 117 aa11.13□□□□□ -0.63
LHX1-202ENST00000616237 APCSP02743 223 aa11.13□□□□□ -0.63
LHX1-202ENST00000616237 LINC01620Q4KN68 170 aa11.13□□□□□ -0.63
LHX1-202ENST00000616237 MRPL51Q4U2R6 128 aaKnown RBP11.13□□□□□ -0.63
LHX1-202ENST00000616237 FAM104BQ5XKR9 115 aa11.13□□□□□ -0.63
LHX1-202ENST00000616237 A0A1B0GXF2 115 aa11.12□□□□□ -0.63
LHX1-202ENST00000616237 ESDP10768 282 aa11.12□□□□□ -0.63
LHX1-202ENST00000616237 MRPL54Q6P161 138 aaKnown RBP11.12□□□□□ -0.63
LHX1-202ENST00000616237 TMEM242Q9NWH2 141 aa11.12□□□□□ -0.63
LHX1-202ENST00000616237 TRBV27A0A0K0K1C4 114 aa11.11□□□□□ -0.63
LHX1-202ENST00000616237 USP17L23D6RBM5 183 aa11.11□□□□□ -0.63
LHX1-202ENST00000616237 FGF6P10767 208 aa11.1□□□□□ -0.63
LHX1-202ENST00000616237 TRAV8-4A0A0B4J246 113 aa11.09□□□□□ -0.63
LHX1-202ENST00000616237 A0A1B0GW15 77 aa11.09□□□□□ -0.63
LHX1-202ENST00000616237 H7C423 109 aa11.09□□□□□ -0.63
LHX1-202ENST00000616237 PNRC1Q12796 327 aaPredicted RBP11.09□□□□□ -0.63
LHX1-202ENST00000616237 Q6ZSA8 131 aa11.09□□□□□ -0.63
LHX1-202ENST00000616237 PRSS1P07477 247 aa11.08□□□□□ -0.64
LHX1-202ENST00000616237 SUMO2P61956 95 aaKnown RBP11.08□□□□□ -0.64
LHX1-202ENST00000616237 HBBP68871 147 aa11.08□□□□□ -0.64
LHX1-202ENST00000616237 AMMECR1LQ6DCA0 310 aa11.08□□□□□ -0.64
LHX1-202ENST00000616237 RNASEKQ6P5S7 137 aaKnown RBP11.08□□□□□ -0.64
LHX1-202ENST00000616237 PPP1R2P9O14990 202 aa11.07□□□□□ -0.64
LHX1-202ENST00000616237 ADCYAP1P18509 176 aa11.07□□□□□ -0.64
LHX1-202ENST00000616237 C14orf177Q52M58 125 aa11.07□□□□□ -0.64
LHX1-202ENST00000616237 VPS13BQ7Z7G8 4022 aa11.07□□□□□ -0.64
LHX1-202ENST00000616237 IGKV3OR2-268A0A0C4DH90 116 aa11.06□□□□□ -0.64
LHX1-202ENST00000616237 VCYO14598 125 aa11.06□□□□□ -0.64
LHX1-202ENST00000616237 PPP1R17O96001 155 aa11.06□□□□□ -0.64
LHX1-202ENST00000616237 SMR3BP02814 79 aaPredicted RBP11.06□□□□□ -0.64
LHX1-202ENST00000616237 TRBV24-1A0A075B6N3 115 aa11.05□□□□□ -0.64
LHX1-202ENST00000616237 LINC00862A6NCI5 91 aa11.05□□□□□ -0.64
LHX1-202ENST00000616237 CKS2P33552 79 aa11.05□□□□□ -0.64
LHX1-202ENST00000616237 D6R8Y8 96 aa11.04□□□□□ -0.64
LHX1-202ENST00000616237 S100A8P05109 93 aa11.04□□□□□ -0.64
LHX1-202ENST00000616237 ZNF25P17030 456 aaPredicted RBP11.04□□□□□ -0.64
LHX1-202ENST00000616237 ATP5L2Q7Z4Y8 100 aa11.04□□□□□ -0.64
LHX1-202ENST00000616237 ANAPC16Q96DE5 110 aa11.04□□□□□ -0.64
LHX1-202ENST00000616237 TMEM218A2RU14 115 aa11.03□□□□□ -0.64
LHX1-202ENST00000616237 C7orf77A4D0Y5 90 aa11.03□□□□□ -0.64
LHX1-202ENST00000616237 F8W036 122 aa11.03□□□□□ -0.64
LHX1-202ENST00000616237 TNFRSF6BO95407 300 aa11.03□□□□□ -0.64
LHX1-202ENST00000616237 MT-ND4LP03901 98 aa11.03□□□□□ -0.64
LHX1-202ENST00000616237 UQCC3Q6UW78 93 aa11.03□□□□□ -0.64
LHX1-202ENST00000616237 MRPL52Q86TS9 123 aaKnown RBP11.03□□□□□ -0.64
LHX1-202ENST00000616237 C20orf78Q9BR46 151 aa11.03□□□□□ -0.64
LHX1-202ENST00000616237 GAGE12HA6NDE8 117 aa11.03□□□□□ -0.64
LHX1-202ENST00000616237 EPM2AB3EWF7 344 aa11.03□□□□□ -0.64
LHX1-202ENST00000616237 NPYP01303 97 aa11.03□□□□□ -0.64
LHX1-202ENST00000616237 OR5A1Q8NGJ0 315 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms