RNA–Protein interactions for RNA: ENST00000615732.1

COL4A1-205, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 5

Gene COL4A1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-205ENST00000615732 SPATA45Q537H7 98 aa7.65□□□□□ -1.18
COL4A1-205ENST00000615732 LINC01545Q5VT33 79 aa7.65□□□□□ -1.18
COL4A1-205ENST00000615732 NEGR1Q7Z3B1 354 aa7.65□□□□□ -1.18
COL4A1-205ENST00000615732 SPATA12Q7Z6I5 190 aa7.65□□□□□ -1.18
COL4A1-205ENST00000615732 TNFRSF18Q9Y5U5 241 aa7.65□□□□□ -1.18
COL4A1-205ENST00000615732 TRAV9-2A0A087WT02 112 aa7.64□□□□□ -1.19
COL4A1-205ENST00000615732 TRAV4A0A0B4J268 109 aa7.64□□□□□ -1.19
COL4A1-205ENST00000615732 LINC01549A6NIU2 74 aa7.64□□□□□ -1.19
COL4A1-205ENST00000615732 PRSS1P07477 247 aa7.64□□□□□ -1.19
COL4A1-205ENST00000615732 POLR2KP53803 58 aaKnown RBP7.64□□□□□ -1.19
COL4A1-205ENST00000615732 DAZ2Q13117 558 aaKnown RBP7.64□□□□□ -1.19
COL4A1-205ENST00000615732 LGALS9BQ3B8N2 356 aa7.64□□□□□ -1.19
COL4A1-205ENST00000615732 LGALS9CQ6DKI2 356 aa7.64□□□□□ -1.19
COL4A1-205ENST00000615732 UFSP1Q6NVU6 142 aa7.64□□□□□ -1.19
COL4A1-205ENST00000615732 CSNK1G2-AS1Q8NCQ2 148 aa7.64□□□□□ -1.19
COL4A1-205ENST00000615732 OR11H2Q8NH07 326 aa7.64□□□□□ -1.19
COL4A1-205ENST00000615732 SCGB3A1Q96QR1 104 aa7.64□□□□□ -1.19
COL4A1-205ENST00000615732 NOP10Q9NPE3 64 aaKnown RBP7.64□□□□□ -1.19
COL4A1-205ENST00000615732 DNAH17Q9UFH2 4485 aa7.64□□□□□ -1.19
COL4A1-205ENST00000615732 DDTP30046 118 aa7.63□□□□□ -1.19
COL4A1-205ENST00000615732 RHOHQ15669 191 aa7.63□□□□□ -1.19
COL4A1-205ENST00000615732 C2orf66Q6UXQ4 117 aa7.63□□□□□ -1.19
COL4A1-205ENST00000615732 ZFP2Q6ZN57 461 aa7.63□□□□□ -1.19
COL4A1-205ENST00000615732 Q6ZN92 141 aa7.63□□□□□ -1.19
COL4A1-205ENST00000615732 Q6ZTI0 123 aa7.63□□□□□ -1.19
COL4A1-205ENST00000615732 C11orf45Q8TAV5 145 aa7.63□□□□□ -1.19
COL4A1-205ENST00000615732 TOMM6Q96B49 74 aa7.63□□□□□ -1.19
COL4A1-205ENST00000615732 C11orf68Q9H3H3 251 aaKnown RBP7.63□□□□□ -1.19
COL4A1-205ENST00000615732 CYSLTR1Q9Y271 337 aa7.63□□□□□ -1.19
COL4A1-205ENST00000615732 DNAH11Q96DT5 4516 aa7.62□□□□□ -1.19
COL4A1-205ENST00000615732 TRGV2A0A075B6R0 118 aa7.62□□□□□ -1.19
COL4A1-205ENST00000615732 TRBV27A0A0K0K1C4 114 aa7.62□□□□□ -1.19
COL4A1-205ENST00000615732 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.62□□□□□ -1.19
COL4A1-205ENST00000615732 I3L3M4 83 aa7.62□□□□□ -1.19
COL4A1-205ENST00000615732 IGHV3-53P01767 116 aa7.62□□□□□ -1.19
COL4A1-205ENST00000615732 DNAJC30Q96LL9 226 aa7.62□□□□□ -1.19
COL4A1-205ENST00000615732 PMCHL2Q9BQD1 86 aa7.62□□□□□ -1.19
COL4A1-205ENST00000615732 GAGE12BA1L429 117 aa7.61□□□□□ -1.19
COL4A1-205ENST00000615732 SMIM9A6NGZ8 99 aa7.61□□□□□ -1.19
COL4A1-205ENST00000615732 LINC00587B1AMM8 73 aa7.61□□□□□ -1.19
COL4A1-205ENST00000615732 GAGE7O76087 117 aa7.61□□□□□ -1.19
COL4A1-205ENST00000615732 GAGE12FP0CL80 117 aa7.61□□□□□ -1.19
COL4A1-205ENST00000615732 GAGE12GP0CL81 117 aa7.61□□□□□ -1.19
COL4A1-205ENST00000615732 GAGE12IP0CL82 117 aa7.61□□□□□ -1.19
COL4A1-205ENST00000615732 P0DMU3 169 aa7.61□□□□□ -1.19
COL4A1-205ENST00000615732 FAM231AP0DMU4 169 aa7.61□□□□□ -1.19
COL4A1-205ENST00000615732 FAM231CP0DMU5 169 aa7.61□□□□□ -1.19
COL4A1-205ENST00000615732 EMP1P54849 157 aa7.61□□□□□ -1.19
COL4A1-205ENST00000615732 PLAC8L1A1L4L8 177 aa7.6□□□□□ -1.19
COL4A1-205ENST00000615732 K7EQD1 137 aa7.6□□□□□ -1.19
COL4A1-205ENST00000615732 CIDEAO60543 219 aa7.6□□□□□ -1.19
COL4A1-205ENST00000615732 NEXN-AS1Q8NBZ9 246 aa7.6□□□□□ -1.19
COL4A1-205ENST00000615732 NACAE9PAV3 2078 aa7.59□□□□□ -1.19
COL4A1-205ENST00000615732 IGHV4-28A0A0C4DH34 117 aa7.59□□□□□ -1.19
COL4A1-205ENST00000615732 hDV102S1A0JD36 115 aa7.59□□□□□ -1.19
COL4A1-205ENST00000615732 IGLL5B9A064 214 aa7.59□□□□□ -1.19
COL4A1-205ENST00000615732 TSHBP01222 138 aa7.59□□□□□ -1.19
COL4A1-205ENST00000615732 MAJINQ3KP22 176 aa7.59□□□□□ -1.19
COL4A1-205ENST00000615732 Q6ZSN1 163 aa7.59□□□□□ -1.19
COL4A1-205ENST00000615732 ERASQ7Z444 233 aa7.59□□□□□ -1.19
COL4A1-205ENST00000615732 Q8NAQ8 132 aa7.59□□□□□ -1.19
COL4A1-205ENST00000615732 DEFB104AQ8WTQ1 72 aa7.59□□□□□ -1.19
COL4A1-205ENST00000615732 ZNF479Q96JC4 524 aa7.59□□□□□ -1.19
COL4A1-205ENST00000615732 MIEN1Q9BRT3 115 aa7.59□□□□□ -1.19
COL4A1-205ENST00000615732 UQCR10Q9UDW1 63 aa7.59□□□□□ -1.19
COL4A1-205ENST00000615732 TRGV4A0A0C4DH28 118 aa7.58□□□□□ -1.2
COL4A1-205ENST00000615732 TRBV10-1A0A0K0K1A3 114 aa7.58□□□□□ -1.2
COL4A1-205ENST00000615732 DPM2O94777 84 aa7.58□□□□□ -1.2
COL4A1-205ENST00000615732 RPL36AP83881 106 aaKnown RBP7.58□□□□□ -1.2
COL4A1-205ENST00000615732 COTL1Q14019 142 aa7.58□□□□□ -1.2
COL4A1-205ENST00000615732 ODF1Q14990 250 aa7.58□□□□□ -1.2
COL4A1-205ENST00000615732 RPL36ALQ969Q0 106 aaKnown RBP7.58□□□□□ -1.2
COL4A1-205ENST00000615732 TMEM141Q96I45 108 aa7.58□□□□□ -1.2
COL4A1-205ENST00000615732 DKK2Q9UBU2 259 aa7.58□□□□□ -1.2
COL4A1-205ENST00000615732 X6R8D5 127 aa7.58□□□□□ -1.2
COL4A1-205ENST00000615732 PKD1P98161 4303 aa7.58□□□□□ -1.2
COL4A1-205ENST00000615732 A0A087WX48 190 aa7.57□□□□□ -1.2
COL4A1-205ENST00000615732 TRAV12-1A0A0B4J245 112 aa7.57□□□□□ -1.2
COL4A1-205ENST00000615732 IGKCP01834 107 aa7.57□□□□□ -1.2
COL4A1-205ENST00000615732 HNRNPA3P51991 378 aaKnown RBP7.57□□□□□ -1.2
COL4A1-205ENST00000615732 Q6ZTC4 211 aa7.57□□□□□ -1.2
COL4A1-205ENST00000615732 ZNRF2Q8NHG8 242 aa7.57□□□□□ -1.2
COL4A1-205ENST00000615732 TIMM17AQ99595 171 aa7.57□□□□□ -1.2
COL4A1-205ENST00000615732 APLNQ9ULZ1 77 aa7.57□□□□□ -1.2
COL4A1-205ENST00000615732 CHTOPQ9Y3Y2 248 aaKnown RBP7.57□□□□□ -1.2
COL4A1-205ENST00000615732 IGLC3P0DOY3 106 aa7.56□□□□□ -1.2
COL4A1-205ENST00000615732 PLNP26678 52 aa7.56□□□□□ -1.2
COL4A1-205ENST00000615732 RPL39P62891 51 aaKnown RBP7.56□□□□□ -1.2
COL4A1-205ENST00000615732 BAALCQ8WXS3 180 aa7.56□□□□□ -1.2
COL4A1-205ENST00000615732 PRADC1Q9BSG0 188 aa7.56□□□□□ -1.2
COL4A1-205ENST00000615732 CELA1Q9UNI1 258 aa7.56□□□□□ -1.2
COL4A1-205ENST00000615732 TRBV7-3A0A075B6L6 115 aa7.55□□□□□ -1.2
COL4A1-205ENST00000615732 IGHV3-38A0A0C4DH36 116 aa7.55□□□□□ -1.2
COL4A1-205ENST00000615732 GAGE12JA6NER3 117 aa7.55□□□□□ -1.2
COL4A1-205ENST00000615732 LYRM9A8MSI8 78 aa7.55□□□□□ -1.2
COL4A1-205ENST00000615732 F8VRH5 84 aa7.55□□□□□ -1.2
COL4A1-205ENST00000615732 DEFB130BP0DP73 79 aa7.55□□□□□ -1.2
COL4A1-205ENST00000615732 DEFB130AP0DP74 79 aa7.55□□□□□ -1.2
COL4A1-205ENST00000615732 MIFP14174 115 aa7.55□□□□□ -1.2
COL4A1-205ENST00000615732 GAGE1Q13065 139 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms