RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 CXCL1P09341 107 aa3.76□□□□□ -1.81
CPNE3-208ENST00000614678 CAMPP49913 170 aa3.76□□□□□ -1.81
CPNE3-208ENST00000614678 LINC00269Q8N2A0 174 aa3.76□□□□□ -1.81
CPNE3-208ENST00000614678 CNFNQ9BYD5 112 aa3.76□□□□□ -1.81
CPNE3-208ENST00000614678 IGKV2D-24A0A075B6R9 120 aa3.75□□□□□ -1.81
CPNE3-208ENST00000614678 A0A1W2PPQ1 181 aa3.75□□□□□ -1.81
CPNE3-208ENST00000614678 SMIM17P0DL12 118 aa3.75□□□□□ -1.81
CPNE3-208ENST00000614678 TMEM241Q24JQ0 296 aa3.75□□□□□ -1.81
CPNE3-208ENST00000614678 OR10G8Q8NGN5 311 aa3.75□□□□□ -1.81
CPNE3-208ENST00000614678 YPEL4Q96NS1 127 aa3.75□□□□□ -1.81
CPNE3-208ENST00000614678 ANGP03950 147 aaKnown RBP3.75□□□□□ -1.81
CPNE3-208ENST00000614678 RBX1P62877 108 aa3.75□□□□□ -1.81
CPNE3-208ENST00000614678 RNASE13Q5GAN3 156 aaKnown RBP3.75□□□□□ -1.81
CPNE3-208ENST00000614678 MRPL54Q6P161 138 aaKnown RBP3.75□□□□□ -1.81
CPNE3-208ENST00000614678 DPH3P1Q9H4G8 78 aa3.75□□□□□ -1.81
CPNE3-208ENST00000614678 PSCAO43653 123 aa3.75□□□□□ -1.81
CPNE3-208ENST00000614678 FAM231DQ6ZW35 169 aa3.75□□□□□ -1.81
CPNE3-208ENST00000614678 CBLN2Q8IUK8 224 aa3.75□□□□□ -1.81
CPNE3-208ENST00000614678 C20orf203Q8NBC4 194 aa3.75□□□□□ -1.81
CPNE3-208ENST00000614678 RASL11AQ6T310 242 aa3.75□□□□□ -1.81
CPNE3-208ENST00000614678 TSKUQ8WUA8 353 aa3.75□□□□□ -1.81
CPNE3-208ENST00000614678 SMIM12Q96EX1 92 aa3.75□□□□□ -1.81
CPNE3-208ENST00000614678 C2orf88Q9BSF0 95 aa3.75□□□□□ -1.81
CPNE3-208ENST00000614678 A0A087WX48 190 aa3.74□□□□□ -1.81
CPNE3-208ENST00000614678 TRBV10-1A0A0K0K1A3 114 aa3.74□□□□□ -1.81
CPNE3-208ENST00000614678 FAM231BA6NCW3 169 aa3.74□□□□□ -1.81
CPNE3-208ENST00000614678 RAB4AP20338 218 aa3.74□□□□□ -1.81
CPNE3-208ENST00000614678 S100PP25815 95 aa3.74□□□□□ -1.81
CPNE3-208ENST00000614678 TIRAPP58753 221 aa3.74□□□□□ -1.81
CPNE3-208ENST00000614678 F2Z2F3 143 aa3.74□□□□□ -1.81
CPNE3-208ENST00000614678 PANO1I0J062 215 aa3.74□□□□□ -1.81
CPNE3-208ENST00000614678 HLA-DQA1P01909 254 aa3.74□□□□□ -1.81
CPNE3-208ENST00000614678 PYY3Q5JQD4 70 aa3.74□□□□□ -1.81
CPNE3-208ENST00000614678 KRTAP26-1Q6PEX3 210 aa3.74□□□□□ -1.81
CPNE3-208ENST00000614678 Q8N814 137 aa3.74□□□□□ -1.81
CPNE3-208ENST00000614678 RPS20P60866 119 aaKnown RBP3.74□□□□□ -1.81
CPNE3-208ENST00000614678 SNRPEP62304 92 aaKnown RBP3.74□□□□□ -1.81
CPNE3-208ENST00000614678 LINC00526Q96FQ7 95 aa3.74□□□□□ -1.81
CPNE3-208ENST00000614678 NIT2Q9NQR4 276 aa3.74□□□□□ -1.81
CPNE3-208ENST00000614678 CARHSP1Q9Y2V2 147 aaKnown RBP3.74□□□□□ -1.81
CPNE3-208ENST00000614678 SDHAF1A6NFY7 115 aa3.73□□□□□ -1.81
CPNE3-208ENST00000614678 A8MWL6 223 aa3.73□□□□□ -1.81
CPNE3-208ENST00000614678 WDR73Q6P4I2 378 aa3.73□□□□□ -1.81
CPNE3-208ENST00000614678 OSTCQ9NRP0 149 aa3.73□□□□□ -1.81
CPNE3-208ENST00000614678 NAT8Q9UHE5 227 aa3.73□□□□□ -1.81
CPNE3-208ENST00000614678 CACNG7P62955 275 aa3.73□□□□□ -1.81
CPNE3-208ENST00000614678 CT83Q5H943 113 aa3.73□□□□□ -1.81
CPNE3-208ENST00000614678 OPRPNQ99935 248 aaPredicted RBP3.73□□□□□ -1.81
CPNE3-208ENST00000614678 CHCHD7Q9BUK0 85 aa3.73□□□□□ -1.81
CPNE3-208ENST00000614678 TRAV9-2A0A087WT02 112 aa3.73□□□□□ -1.81
CPNE3-208ENST00000614678 A0A1B0GUT8 65 aa3.73□□□□□ -1.81
CPNE3-208ENST00000614678 PRSS47A8MTI9 375 aa3.73□□□□□ -1.81
CPNE3-208ENST00000614678 CIDEAO60543 219 aa3.73□□□□□ -1.81
CPNE3-208ENST00000614678 SLPIP03973 132 aa3.73□□□□□ -1.81
CPNE3-208ENST00000614678 S100A8P05109 93 aa3.73□□□□□ -1.81
CPNE3-208ENST00000614678 TAGLN2P37802 199 aaKnown RBP3.73□□□□□ -1.81
CPNE3-208ENST00000614678 SH2D6Q7Z4S9 175 aa3.73□□□□□ -1.81
CPNE3-208ENST00000614678 TMEM242Q9NWH2 141 aa3.73□□□□□ -1.81
CPNE3-208ENST00000614678 SMIM27A0A1W2PRY6 76 aa3.72□□□□□ -1.81
CPNE3-208ENST00000614678 XKRY2A2RUG3 117 aa3.72□□□□□ -1.81
CPNE3-208ENST00000614678 PEA15Q15121 130 aa3.72□□□□□ -1.81
CPNE3-208ENST00000614678 MRPL51Q4U2R6 128 aaKnown RBP3.72□□□□□ -1.81
CPNE3-208ENST00000614678 LINC00528Q8N1L1 170 aa3.72□□□□□ -1.81
CPNE3-208ENST00000614678 NRACQ8N912 160 aa3.72□□□□□ -1.81
CPNE3-208ENST00000614678 URGCP-MRPS24S4R325 110 aa3.72□□□□□ -1.81
CPNE3-208ENST00000614678 TSHBP01222 138 aa3.72□□□□□ -1.81
CPNE3-208ENST00000614678 TRGC1P0CF51 173 aa3.72□□□□□ -1.81
CPNE3-208ENST00000614678 RAB14P61106 215 aa3.72□□□□□ -1.81
CPNE3-208ENST00000614678 IGLV5-52A0A0A0MRZ9 124 aa3.72□□□□□ -1.81
CPNE3-208ENST00000614678 AKR1D1P51857 326 aa3.72□□□□□ -1.81
CPNE3-208ENST00000614678 IQCJQ1A5X6 159 aa3.72□□□□□ -1.81
CPNE3-208ENST00000614678 FAM104AQ969W3 186 aa3.72□□□□□ -1.81
CPNE3-208ENST00000614678 TMEM70Q9BUB7 260 aa3.72□□□□□ -1.81
CPNE3-208ENST00000614678 TRBV25-1A0A075B6N4 114 aa3.71□□□□□ -1.81
CPNE3-208ENST00000614678 PCP4P48539 62 aa3.71□□□□□ -1.81
CPNE3-208ENST00000614678 RPL39P62891 51 aaKnown RBP3.71□□□□□ -1.81
CPNE3-208ENST00000614678 C10orf126Q8N4M7 172 aa3.71□□□□□ -1.81
CPNE3-208ENST00000614678 A0A087WWC5 75 aa3.71□□□□□ -1.82
CPNE3-208ENST00000614678 AMTP48728 403 aa3.71□□□□□ -1.82
CPNE3-208ENST00000614678 REG3AQ06141 175 aa3.71□□□□□ -1.82
CPNE3-208ENST00000614678 TCAPO15273 167 aa3.71□□□□□ -1.82
CPNE3-208ENST00000614678 NPYP01303 97 aa3.71□□□□□ -1.82
CPNE3-208ENST00000614678 APOC3P02656 99 aa3.71□□□□□ -1.82
CPNE3-208ENST00000614678 PRSS1P07477 247 aa3.71□□□□□ -1.82
CPNE3-208ENST00000614678 ZC2HC1BQ5TFG8 222 aa3.71□□□□□ -1.82
CPNE3-208ENST00000614678 TMEM191AQ9H0A3 160 aa3.71□□□□□ -1.82
CPNE3-208ENST00000614678 IGHV1-24A0A0C4DH33 117 aa3.71□□□□□ -1.82
CPNE3-208ENST00000614678 TMEM218A2RU14 115 aa3.71□□□□□ -1.82
CPNE3-208ENST00000614678 D6R8Y8 96 aa3.71□□□□□ -1.82
CPNE3-208ENST00000614678 J3QL48 77 aa3.71□□□□□ -1.82
CPNE3-208ENST00000614678 KIAA1644Q3SXP7 199 aa3.71□□□□□ -1.82
CPNE3-208ENST00000614678 RNASEKQ6P5S7 137 aaKnown RBP3.71□□□□□ -1.82
CPNE3-208ENST00000614678 PRR34Q9NV39 138 aa3.71□□□□□ -1.82
CPNE3-208ENST00000614678 A0A1B0GXF2 115 aa3.7□□□□□ -1.82
CPNE3-208ENST00000614678 USP17L23D6RBM5 183 aa3.7□□□□□ -1.82
CPNE3-208ENST00000614678 PHOX2AO14813 284 aa3.7□□□□□ -1.82
CPNE3-208ENST00000614678 GCSHP23434 173 aa3.7□□□□□ -1.82
CPNE3-208ENST00000614678 POLR2KP53803 58 aaKnown RBP3.7□□□□□ -1.82
CPNE3-208ENST00000614678 TMEM243Q9BU79 118 aa3.7□□□□□ -1.82
CPNE3-208ENST00000614678 NAT8BQ9UHF3 227 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms