RNA–Protein interactions for RNA: ENST00000614502.4

PDLIM2-218, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-218ENST00000614502 HIGD1CA8MV81 97 aa7.97□□□□□ -1.13
PDLIM2-218ENST00000614502 H7C1H1 209 aa7.97□□□□□ -1.13
PDLIM2-218ENST00000614502 M0QY20 66 aa7.97□□□□□ -1.13
PDLIM2-218ENST00000614502 ANGP03950 147 aaKnown RBP7.97□□□□□ -1.13
PDLIM2-218ENST00000614502 MGPP08493 103 aa7.97□□□□□ -1.13
PDLIM2-218ENST00000614502 MIAQ16674 131 aa7.97□□□□□ -1.13
PDLIM2-218ENST00000614502 LINC00528Q8N1L1 170 aa7.97□□□□□ -1.13
PDLIM2-218ENST00000614502 DEFB104AQ8WTQ1 72 aa7.97□□□□□ -1.13
PDLIM2-218ENST00000614502 CHCHD5Q9BSY4 110 aa7.97□□□□□ -1.13
PDLIM2-218ENST00000614502 TRBV25-1A0A075B6N4 114 aa7.96□□□□□ -1.14
PDLIM2-218ENST00000614502 J3QL48 77 aa7.96□□□□□ -1.14
PDLIM2-218ENST00000614502 SUMO4Q6EEV6 95 aa7.96□□□□□ -1.14
PDLIM2-218ENST00000614502 DNAJC30Q96LL9 226 aa7.96□□□□□ -1.14
PDLIM2-218ENST00000614502 A0A1B0GUT8 65 aa7.95□□□□□ -1.14
PDLIM2-218ENST00000614502 MPV17L2Q567V2 206 aa7.95□□□□□ -1.14
PDLIM2-218ENST00000614502 ENHOQ6UWT2 76 aa7.95□□□□□ -1.14
PDLIM2-218ENST00000614502 SMIM15Q7Z3B0 74 aa7.95□□□□□ -1.14
PDLIM2-218ENST00000614502 NUP35Q8NFH5 326 aa7.95□□□□□ -1.14
PDLIM2-218ENST00000614502 CHAC1Q9BUX1 264 aa7.95□□□□□ -1.14
PDLIM2-218ENST00000614502 SMIM27A0A1W2PRY6 76 aa7.94□□□□□ -1.14
PDLIM2-218ENST00000614502 RASL11AQ6T310 242 aa7.94□□□□□ -1.14
PDLIM2-218ENST00000614502 UQCC3Q6UW78 93 aa7.94□□□□□ -1.14
PDLIM2-218ENST00000614502 BORCS7Q96B45 105 aa7.94□□□□□ -1.14
PDLIM2-218ENST00000614502 NIT2Q9NQR4 276 aa7.94□□□□□ -1.14
PDLIM2-218ENST00000614502 NAT8BQ9UHF3 227 aa7.94□□□□□ -1.14
PDLIM2-218ENST00000614502 PNRC1Q12796 327 aaPredicted RBP7.93□□□□□ -1.14
PDLIM2-218ENST00000614502 DGAT2L7PQ6IED9 249 aa7.93□□□□□ -1.14
PDLIM2-218ENST00000614502 SCXQ7RTU7 201 aa7.93□□□□□ -1.14
PDLIM2-218ENST00000614502 TMEM191AQ9H0A3 160 aa7.93□□□□□ -1.14
PDLIM2-218ENST00000614502 LRP1Q07954 4544 aaKnown RBP7.92□□□□□ -1.14
PDLIM2-218ENST00000614502 IGHV1-24A0A0C4DH33 117 aa7.92□□□□□ -1.14
PDLIM2-218ENST00000614502 KRTAP29-1A8MX34 341 aaPredicted RBP7.92□□□□□ -1.14
PDLIM2-218ENST00000614502 HLA-DQA1P01909 254 aa7.92□□□□□ -1.14
PDLIM2-218ENST00000614502 RIGQ13278 110 aa7.92□□□□□ -1.14
PDLIM2-218ENST00000614502 IQCJQ1A5X6 159 aa7.92□□□□□ -1.14
PDLIM2-218ENST00000614502 LINC01620Q4KN68 170 aa7.92□□□□□ -1.14
PDLIM2-218ENST00000614502 GATD1Q8NB37 220 aa7.92□□□□□ -1.14
PDLIM2-218ENST00000614502 PRR34Q9NV39 138 aa7.92□□□□□ -1.14
PDLIM2-218ENST00000614502 TRAV26-2A0A0B4J265 109 aa7.91□□□□□ -1.14
PDLIM2-218ENST00000614502 USP17L23D6RBM5 183 aa7.91□□□□□ -1.14
PDLIM2-218ENST00000614502 RBX1P62877 108 aa7.91□□□□□ -1.14
PDLIM2-218ENST00000614502 NTM-AS1Q6ZSK4 140 aa7.91□□□□□ -1.14
PDLIM2-218ENST00000614502 CLRN3Q8NCR9 226 aa7.91□□□□□ -1.14
PDLIM2-218ENST00000614502 CIRBP-AS1Q8TBR5 109 aa7.91□□□□□ -1.14
PDLIM2-218ENST00000614502 TRAV8-4A0A0B4J246 113 aa7.9□□□□□ -1.14
PDLIM2-218ENST00000614502 TMEM218A2RU14 115 aa7.9□□□□□ -1.14
PDLIM2-218ENST00000614502 LINC00862A6NCI5 91 aa7.9□□□□□ -1.14
PDLIM2-218ENST00000614502 PPP1R2P9O14990 202 aa7.9□□□□□ -1.14
PDLIM2-218ENST00000614502 GAGE6Q13070 117 aa7.9□□□□□ -1.14
PDLIM2-218ENST00000614502 RNF185Q96GF1 192 aa7.9□□□□□ -1.14
PDLIM2-218ENST00000614502 PKHD1L1Q86WI1 4243 aa7.89□□□□□ -1.15
PDLIM2-218ENST00000614502 A0A1B0GUV1 79 aa7.89□□□□□ -1.15
PDLIM2-218ENST00000614502 ADCYAP1P18509 176 aa7.89□□□□□ -1.15
PDLIM2-218ENST00000614502 RAB4AP20338 218 aa7.89□□□□□ -1.15
PDLIM2-218ENST00000614502 COMMD7Q86VX2 200 aa7.89□□□□□ -1.15
PDLIM2-218ENST00000614502 LINC00269Q8N2A0 174 aa7.89□□□□□ -1.15
PDLIM2-218ENST00000614502 ANAPC16Q96DE5 110 aa7.89□□□□□ -1.15
PDLIM2-218ENST00000614502 TMEM243Q9BU79 118 aa7.89□□□□□ -1.15
PDLIM2-218ENST00000614502 HMCN2Q8NDA2 5059 aa7.89□□□□□ -1.15
PDLIM2-218ENST00000614502 FAT3Q8TDW7 4589 aa7.88□□□□□ -1.15
PDLIM2-218ENST00000614502 A0A1B0GW15 77 aa7.88□□□□□ -1.15
PDLIM2-218ENST00000614502 UBE2L6O14933 153 aa7.88□□□□□ -1.15
PDLIM2-218ENST00000614502 MT-ND4LP03901 98 aa7.88□□□□□ -1.15
PDLIM2-218ENST00000614502 REG3AQ06141 175 aa7.88□□□□□ -1.15
PDLIM2-218ENST00000614502 AMN1Q8IY45 258 aa7.88□□□□□ -1.15
PDLIM2-218ENST00000614502 C9orf163Q8N9P6 203 aa7.88□□□□□ -1.15
PDLIM2-218ENST00000614502 RPL39LQ96EH5 51 aaKnown RBP7.88□□□□□ -1.15
PDLIM2-218ENST00000614502 TRBV6-5A0A0K0K1A5 114 aa7.87□□□□□ -1.15
PDLIM2-218ENST00000614502 F8W036 122 aa7.87□□□□□ -1.15
PDLIM2-218ENST00000614502 GAS8-AS1O95177 125 aa7.87□□□□□ -1.15
PDLIM2-218ENST00000614502 PRSS1P07477 247 aa7.87□□□□□ -1.15
PDLIM2-218ENST00000614502 COTL1Q14019 142 aa7.87□□□□□ -1.15
PDLIM2-218ENST00000614502 FAM104BQ5XKR9 115 aa7.87□□□□□ -1.15
PDLIM2-218ENST00000614502 CLPSL2Q6UWE3 100 aa7.87□□□□□ -1.15
PDLIM2-218ENST00000614502 MRAP2Q96G30 205 aa7.87□□□□□ -1.15
PDLIM2-218ENST00000614502 SEC11CQ9BY50 192 aa7.87□□□□□ -1.15
PDLIM2-218ENST00000614502 A0A1B0GXF2 115 aa7.86□□□□□ -1.15
PDLIM2-218ENST00000614502 SDHAF1A6NFY7 115 aa7.86□□□□□ -1.15
PDLIM2-218ENST00000614502 OXTP01178 125 aa7.86□□□□□ -1.15
PDLIM2-218ENST00000614502 CAMPP49913 170 aa7.86□□□□□ -1.15
PDLIM2-218ENST00000614502 MRPL54Q6P161 138 aaKnown RBP7.86□□□□□ -1.15
PDLIM2-218ENST00000614502 AP5S1Q9NUS5 200 aa7.86□□□□□ -1.15
PDLIM2-218ENST00000614502 UBR4Q5T4S7 5183 aa7.86□□□□□ -1.15
PDLIM2-218ENST00000614502 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.85□□□□□ -1.15
PDLIM2-218ENST00000614502 S100A8P05109 93 aa7.85□□□□□ -1.15
PDLIM2-218ENST00000614502 RPS10P46783 165 aaKnown RBP7.85□□□□□ -1.15
PDLIM2-218ENST00000614502 RPL37AP61513 92 aaKnown RBP7.85□□□□□ -1.15
PDLIM2-218ENST00000614502 HBBP68871 147 aa7.85□□□□□ -1.15
PDLIM2-218ENST00000614502 MRPL51Q4U2R6 128 aaKnown RBP7.85□□□□□ -1.15
PDLIM2-218ENST00000614502 KRTAP26-1Q6PEX3 210 aa7.85□□□□□ -1.15
PDLIM2-218ENST00000614502 ATP5L2Q7Z4Y8 100 aa7.85□□□□□ -1.15
PDLIM2-218ENST00000614502 C20orf203Q8NBC4 194 aa7.85□□□□□ -1.15
PDLIM2-218ENST00000614502 NCR2O95944 276 aa7.84□□□□□ -1.15
PDLIM2-218ENST00000614502 AMTP48728 403 aa7.84□□□□□ -1.15
PDLIM2-218ENST00000614502 POLR2KP53803 58 aaKnown RBP7.84□□□□□ -1.15
PDLIM2-218ENST00000614502 KRTAP10-4P60372 401 aaPredicted RBP7.84□□□□□ -1.15
PDLIM2-218ENST00000614502 CNBPP62633 177 aaKnown RBP7.84□□□□□ -1.15
PDLIM2-218ENST00000614502 C10orf91Q5T1B1 145 aa7.84□□□□□ -1.15
PDLIM2-218ENST00000614502 SERTAD4-AS1Q5TG53 156 aa7.84□□□□□ -1.15
PDLIM2-218ENST00000614502 CFAP161Q6P656 301 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms