RNA–Protein interactions for RNA: ENST00000614259.1

BRCA2-207, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 2

Gene BRCA2, Length 7,950 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-207ENST00000614259 SIX6O95475 246 aa0.79□□□□□ -2.28
BRCA2-207ENST00000614259 SMIM3Q9BZL3 60 aa0.79□□□□□ -2.28
BRCA2-207ENST00000614259 CHD5Q8TDI0 1954 aa0.79□□□□□ -2.28
BRCA2-207ENST00000614259 IGKV3-7A0A075B6H7 116 aa0.78□□□□□ -2.28
BRCA2-207ENST00000614259 JMJD7-PLA2G4BH0Y9G9 81 aa0.78□□□□□ -2.28
BRCA2-207ENST00000614259 CCL16O15467 120 aa0.78□□□□□ -2.28
BRCA2-207ENST00000614259 DPY30Q9C005 99 aa0.78□□□□□ -2.28
BRCA2-207ENST00000614259 MAP1AP78559 2803 aaPredicted RBP0.78□□□□□ -2.28
BRCA2-207ENST00000614259 DOCK5Q9H7D0 1870 aa0.78□□□□□ -2.28
BRCA2-207ENST00000614259 LRP4O75096 1905 aa0.78□□□□□ -2.28
BRCA2-207ENST00000614259 TRGV2A0A075B6R0 118 aa0.78□□□□□ -2.28
BRCA2-207ENST00000614259 NPC2P61916 151 aa0.78□□□□□ -2.28
BRCA2-207ENST00000614259 FAM74A4Q5TZK3 123 aa0.78□□□□□ -2.28
BRCA2-207ENST00000614259 CHD7Q9P2D1 2997 aa0.78□□□□□ -2.28
BRCA2-207ENST00000614259 DNAH1Q9P2D7 4330 aa0.78□□□□□ -2.28
BRCA2-207ENST00000614259 KRTAP12-1P59990 96 aa0.78□□□□□ -2.28
BRCA2-207ENST00000614259 XAF1Q6GPH4 301 aa0.78□□□□□ -2.28
BRCA2-207ENST00000614259 C12orf57Q99622 126 aa0.78□□□□□ -2.28
BRCA2-207ENST00000614259 MGST2Q99735 147 aa0.78□□□□□ -2.28
BRCA2-207ENST00000614259 LAMA3Q16787 3333 aa0.78□□□□□ -2.28
BRCA2-207ENST00000614259 C2orf16Q68DN1 1984 aa0.78□□□□□ -2.28
BRCA2-207ENST00000614259 TANC1Q9C0D5 1861 aa0.78□□□□□ -2.28
BRCA2-207ENST00000614259 TRBV7-3A0A075B6L6 115 aa0.78□□□□□ -2.28
BRCA2-207ENST00000614259 J3QKU1 62 aa0.78□□□□□ -2.28
BRCA2-207ENST00000614259 S100A2P29034 98 aa0.78□□□□□ -2.28
BRCA2-207ENST00000614259 Q0VG73 95 aa0.78□□□□□ -2.28
BRCA2-207ENST00000614259 COL5A1-AS1Q5SY13 56 aa0.78□□□□□ -2.28
BRCA2-207ENST00000614259 CDC42SE1Q9NRR8 79 aa0.78□□□□□ -2.28
BRCA2-207ENST00000614259 DOCK1Q14185 1865 aa0.78□□□□□ -2.28
BRCA2-207ENST00000614259 ANGP03950 147 aaKnown RBP0.78□□□□□ -2.28
BRCA2-207ENST00000614259 AZU1P20160 251 aa0.78□□□□□ -2.28
BRCA2-207ENST00000614259 SNCAP37840 140 aa0.78□□□□□ -2.28
BRCA2-207ENST00000614259 KRTAP5-1Q6L8H4 278 aa0.78□□□□□ -2.28
BRCA2-207ENST00000614259 SLC25A26Q70HW3 274 aa0.78□□□□□ -2.28
BRCA2-207ENST00000614259 LINC00304Q8N9R0 145 aa0.78□□□□□ -2.28
BRCA2-207ENST00000614259 FANCMQ8IYD8 2048 aa0.78□□□□□ -2.28
BRCA2-207ENST00000614259 TPRXLQ17RH7 258 aa0.78□□□□□ -2.29
BRCA2-207ENST00000614259 SACSQ9NZJ4 4579 aa0.78□□□□□ -2.29
BRCA2-207ENST00000614259 DNAH9Q9NYC9 4486 aa0.78□□□□□ -2.29
BRCA2-207ENST00000614259 STARD9Q9P2P6 4700 aa0.78□□□□□ -2.29
BRCA2-207ENST00000614259 CXCL1P09341 107 aa0.78□□□□□ -2.29
BRCA2-207ENST00000614259 SPATA45Q537H7 98 aa0.78□□□□□ -2.29
BRCA2-207ENST00000614259 CARD19Q96LW7 228 aa0.78□□□□□ -2.29
BRCA2-207ENST00000614259 TSSK6Q9BXA6 273 aa0.78□□□□□ -2.29
BRCA2-207ENST00000614259 V9GYH0 126 aa0.78□□□□□ -2.29
BRCA2-207ENST00000614259 MYCBP2O75592 4640 aa0.78□□□□□ -2.29
BRCA2-207ENST00000614259 DYNC2H1Q8NCM8 4307 aaKnown RBP0.77□□□□□ -2.29
BRCA2-207ENST00000614259 ZNF469Q96JG9 3925 aaPredicted RBP0.77□□□□□ -2.29
BRCA2-207ENST00000614259 PITX3O75364 302 aa0.77□□□□□ -2.29
BRCA2-207ENST00000614259 TCRAP04437 139 aa0.77□□□□□ -2.29
BRCA2-207ENST00000614259 MGST1P10620 155 aaKnown RBP0.77□□□□□ -2.29
BRCA2-207ENST00000614259 TTTY13Q9BZ97 58 aa0.77□□□□□ -2.29
BRCA2-207ENST00000614259 TEX29Q8N6K0 151 aa0.77□□□□□ -2.29
BRCA2-207ENST00000614259 PLXND1Q9Y4D7 1925 aa0.77□□□□□ -2.29
BRCA2-207ENST00000614259 LAMA4Q16363 1823 aa0.77□□□□□ -2.29
BRCA2-207ENST00000614259 IGKV3D-7A0A0C4DH55 119 aa0.77□□□□□ -2.29
BRCA2-207ENST00000614259 IGKV3OR2-268A0A0C4DH90 116 aa0.77□□□□□ -2.29
BRCA2-207ENST00000614259 TRBV7-7A0A0K0K1E9 115 aa0.77□□□□□ -2.29
BRCA2-207ENST00000614259 A0A1W2PPM0 123 aa0.77□□□□□ -2.29
BRCA2-207ENST00000614259 PYY3Q5JQD4 70 aa0.77□□□□□ -2.29
BRCA2-207ENST00000614259 PSMG4Q5JS54 123 aa0.77□□□□□ -2.29
BRCA2-207ENST00000614259 C9orf163Q8N9P6 203 aa0.77□□□□□ -2.29
BRCA2-207ENST00000614259 C14orf144Q96I85 54 aa0.77□□□□□ -2.29
BRCA2-207ENST00000614259 TTTY12Q9BZ98 90 aa0.77□□□□□ -2.29
BRCA2-207ENST00000614259 AKAP11Q9UKA4 1901 aa0.77□□□□□ -2.29
BRCA2-207ENST00000614259 PIKFYVEQ9Y2I7 2098 aa0.77□□□□□ -2.29
BRCA2-207ENST00000614259 EDF1O60869 148 aaKnown RBP0.77□□□□□ -2.29
BRCA2-207ENST00000614259 SNRPD3P62318 126 aaKnown RBP0.77□□□□□ -2.29
BRCA2-207ENST00000614259 WDR81Q562E7 1941 aa0.77□□□□□ -2.29
BRCA2-207ENST00000614259 COA5Q86WW8 74 aa0.77□□□□□ -2.29
BRCA2-207ENST00000614259 TRGV9Q99603 122 aa0.77□□□□□ -2.29
BRCA2-207ENST00000614259 ARID1AO14497 2285 aa0.77□□□□□ -2.29
BRCA2-207ENST00000614259 HUWE1Q7Z6Z7 4374 aaKnown RBP0.77□□□□□ -2.29
BRCA2-207ENST00000614259 CASP8AP2Q9UKL3 1982 aa0.77□□□□□ -2.29
BRCA2-207ENST00000614259 A0A1B0GV90 55 aa0.77□□□□□ -2.29
BRCA2-207ENST00000614259 C10orf142B7Z368 130 aa0.77□□□□□ -2.29
BRCA2-207ENST00000614259 F8W1H4 67 aa0.77□□□□□ -2.29
BRCA2-207ENST00000614259 IGLV3-1P01715 115 aa0.77□□□□□ -2.29
BRCA2-207ENST00000614259 UNQ5815/PRO19632Q6UWF5 114 aa0.77□□□□□ -2.29
BRCA2-207ENST00000614259 SNX29P2Q8IUI4 249 aa0.77□□□□□ -2.29
BRCA2-207ENST00000614259 LIMD2Q9BT23 127 aa0.77□□□□□ -2.29
BRCA2-207ENST00000614259 PLIN4Q96Q06 1357 aa0.76□□□□□ -2.29
BRCA2-207ENST00000614259 RPL7L1Q6DKI1 246 aaKnown RBP0.76□□□□□ -2.29
BRCA2-207ENST00000614259 LINC00167Q96N53 147 aa0.76□□□□□ -2.29
BRCA2-207ENST00000614259 GBF1Q92538 1859 aa0.76□□□□□ -2.29
BRCA2-207ENST00000614259 TCF20Q9UGU0 1960 aaKnown RBP0.76□□□□□ -2.29
BRCA2-207ENST00000614259 ATOX1O00244 68 aa0.76□□□□□ -2.29
BRCA2-207ENST00000614259 IFITM1P13164 125 aa0.76□□□□□ -2.29
BRCA2-207ENST00000614259 SMIM11AP58511 58 aa0.76□□□□□ -2.29
BRCA2-207ENST00000614259 SVILO95425 2214 aa0.76□□□□□ -2.29
BRCA2-207ENST00000614259 DYNC1H1Q14204 4646 aaKnown RBP0.76□□□□□ -2.29
BRCA2-207ENST00000614259 MYH3P11055 1940 aa0.76□□□□□ -2.29
BRCA2-207ENST00000614259 A6NIN4 97 aa0.76□□□□□ -2.29
BRCA2-207ENST00000614259 LINC00694P0DN24 101 aa0.76□□□□□ -2.29
BRCA2-207ENST00000614259 KRTAP10-10P60014 251 aa0.76□□□□□ -2.29
BRCA2-207ENST00000614259 MEIG1Q5JSS6 88 aa0.76□□□□□ -2.29
BRCA2-207ENST00000614259 LSM2Q9Y333 95 aaKnown RBP0.76□□□□□ -2.29
BRCA2-207ENST00000614259 ZNF25P17030 456 aaPredicted RBP0.76□□□□□ -2.29
BRCA2-207ENST00000614259 CLECL1Q8IZS7 167 aa0.76□□□□□ -2.29
BRCA2-207ENST00000614259 IGKV2D-26A0A0A0MRZ7 120 aa0.76□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms