RNA–Protein interactions for RNA: ENST00000614240.4

SMN2-213, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-213ENST00000614240 SLPIP03973 132 aa11.34□□□□□ -0.59
SMN2-213ENST00000614240 GNG4P50150 75 aa11.34□□□□□ -0.59
SMN2-213ENST00000614240 CCL20P78556 96 aa11.34□□□□□ -0.59
SMN2-213ENST00000614240 SPACA4Q8TDM5 124 aa11.34□□□□□ -0.59
SMN2-213ENST00000614240 PGLYRP4Q96LB8 373 aa11.34□□□□□ -0.59
SMN2-213ENST00000614240 RAB19A4D1S5 217 aa11.33□□□□□ -0.6
SMN2-213ENST00000614240 GAGE12HA6NDE8 117 aa11.33□□□□□ -0.6
SMN2-213ENST00000614240 HMSDA8MTL9 139 aa11.33□□□□□ -0.6
SMN2-213ENST00000614240 LYZL1Q6UWQ5 148 aa11.33□□□□□ -0.6
SMN2-213ENST00000614240 C19orf71A6NCJ1 209 aa11.32□□□□□ -0.6
SMN2-213ENST00000614240 NTF3P20783 257 aa11.32□□□□□ -0.6
SMN2-213ENST00000614240 TEX46H3BTG2 121 aa11.31□□□□□ -0.6
SMN2-213ENST00000614240 PHOX2AO14813 284 aa11.31□□□□□ -0.6
SMN2-213ENST00000614240 COX6A2Q02221 97 aa11.31□□□□□ -0.6
SMN2-213ENST00000614240 AMMECR1LQ6DCA0 310 aa11.31□□□□□ -0.6
SMN2-213ENST00000614240 SMIM12Q96EX1 92 aa11.31□□□□□ -0.6
SMN2-213ENST00000614240 BIN3Q9NQY0 253 aa11.31□□□□□ -0.6
SMN2-213ENST00000614240 PLAC8Q9NZF1 115 aa11.31□□□□□ -0.6
SMN2-213ENST00000614240 RPS10P46783 165 aaKnown RBP11.3□□□□□ -0.6
SMN2-213ENST00000614240 MAJINQ3KP22 176 aa11.3□□□□□ -0.6
SMN2-213ENST00000614240 HIGD2BQ4VC39 106 aa11.3□□□□□ -0.6
SMN2-213ENST00000614240 GTSF1Q8WW33 167 aa11.3□□□□□ -0.6
SMN2-213ENST00000614240 MED9Q9NWA0 146 aa11.3□□□□□ -0.6
SMN2-213ENST00000614240 HMCN2Q8NDA2 5059 aa11.29□□□□□ -0.6
SMN2-213ENST00000614240 TRAV1-1A0A0B4J248 108 aa11.29□□□□□ -0.6
SMN2-213ENST00000614240 IGKV2-24A0A0C4DH68 120 aa11.29□□□□□ -0.6
SMN2-213ENST00000614240 TWIST1Q15672 202 aa11.29□□□□□ -0.6
SMN2-213ENST00000614240 C15orf56Q8N910 161 aa11.29□□□□□ -0.6
SMN2-213ENST00000614240 PDE6DO43924 150 aa11.28□□□□□ -0.6
SMN2-213ENST00000614240 NDUFS6O75380 124 aaKnown RBP11.28□□□□□ -0.6
SMN2-213ENST00000614240 RNASEKQ6P5S7 137 aaKnown RBP11.28□□□□□ -0.6
SMN2-213ENST00000614240 C9orf62Q8N4C0 152 aa11.28□□□□□ -0.6
SMN2-213ENST00000614240 MEF2BQ02080 365 aaPredicted RBP11.27□□□□□ -0.61
SMN2-213ENST00000614240 EIF5AL1Q6IS14 154 aaKnown RBP11.27□□□□□ -0.61
SMN2-213ENST00000614240 PRSS3P2Q8NHM4 247 aa11.27□□□□□ -0.61
SMN2-213ENST00000614240 CHCHD10Q8WYQ3 142 aaPredicted RBP11.27□□□□□ -0.61
SMN2-213ENST00000614240 TRAV26-2A0A0B4J265 109 aa11.26□□□□□ -0.61
SMN2-213ENST00000614240 GATD1Q8NB37 220 aa11.26□□□□□ -0.61
SMN2-213ENST00000614240 LYPD6BQ8NI32 183 aa11.26□□□□□ -0.61
SMN2-213ENST00000614240 CTRLP40313 264 aa11.25□□□□□ -0.61
SMN2-213ENST00000614240 SMIM15Q7Z3B0 74 aa11.25□□□□□ -0.61
SMN2-213ENST00000614240 STPG4Q8N801 248 aa11.25□□□□□ -0.61
SMN2-213ENST00000614240 NUDT10Q8NFP7 164 aa11.25□□□□□ -0.61
SMN2-213ENST00000614240 NUDT11Q96G61 164 aa11.25□□□□□ -0.61
SMN2-213ENST00000614240 TRBV20OR9-2A0A075B6H5 130 aa11.24□□□□□ -0.61
SMN2-213ENST00000614240 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.24□□□□□ -0.61
SMN2-213ENST00000614240 IGKV2-29A2NJV5 120 aaPredicted RBP11.24□□□□□ -0.61
SMN2-213ENST00000614240 FAT3Q8TDW7 4589 aa11.23□□□□□ -0.61
SMN2-213ENST00000614240 NCR2O95944 276 aa11.23□□□□□ -0.61
SMN2-213ENST00000614240 APCSP02743 223 aa11.23□□□□□ -0.61
SMN2-213ENST00000614240 PRR3P79522 188 aaKnown RBP11.23□□□□□ -0.61
SMN2-213ENST00000614240 Q6ZNX1 250 aa11.23□□□□□ -0.61
SMN2-213ENST00000614240 RPP21Q9H633 154 aaKnown RBP11.23□□□□□ -0.61
SMN2-213ENST00000614240 GVQW2A0A096LPI5 108 aaPredicted RBP11.22□□□□□ -0.61
SMN2-213ENST00000614240 H7C423 109 aa11.22□□□□□ -0.61
SMN2-213ENST00000614240 BCL2P10415 239 aa11.22□□□□□ -0.61
SMN2-213ENST00000614240 FGF6P10767 208 aa11.22□□□□□ -0.61
SMN2-213ENST00000614240 RPL39LQ96EH5 51 aaKnown RBP11.22□□□□□ -0.61
SMN2-213ENST00000614240 UBR4Q5T4S7 5183 aa11.21□□□□□ -0.61
SMN2-213ENST00000614240 BTF3L4Q96K17 158 aa11.21□□□□□ -0.61
SMN2-213ENST00000614240 LINC01600Q96MT4 127 aa11.21□□□□□ -0.61
SMN2-213ENST00000614240 CNFNQ9BYD5 112 aa11.21□□□□□ -0.61
SMN2-213ENST00000614240 RNASE7Q9H1E1 156 aaKnown RBP11.21□□□□□ -0.61
SMN2-213ENST00000614240 A0A096LNI7 61 aa11.2□□□□□ -0.62
SMN2-213ENST00000614240 XCL1P47992 114 aa11.2□□□□□ -0.62
SMN2-213ENST00000614240 TEX261Q6UWH6 196 aa11.2□□□□□ -0.62
SMN2-213ENST00000614240 TMEM101Q96IK0 257 aa11.2□□□□□ -0.62
SMN2-213ENST00000614240 LINC00474Q9P2X8 69 aa11.2□□□□□ -0.62
SMN2-213ENST00000614240 PKIGQ9Y2B9 76 aa11.2□□□□□ -0.62
SMN2-213ENST00000614240 SDHAF1A6NFY7 115 aa11.19□□□□□ -0.62
SMN2-213ENST00000614240 PMCHP20382 165 aa11.19□□□□□ -0.62
SMN2-213ENST00000614240 FOXI1Q12951 378 aa11.19□□□□□ -0.62
SMN2-213ENST00000614240 ZNF25P17030 456 aaPredicted RBP11.18□□□□□ -0.62
SMN2-213ENST00000614240 FOXA3P55318 350 aaPredicted RBP11.18□□□□□ -0.62
SMN2-213ENST00000614240 OR5A1Q8NGJ0 315 aa11.18□□□□□ -0.62
SMN2-213ENST00000614240 I3L3M4 83 aa11.17□□□□□ -0.62
SMN2-213ENST00000614240 CCL25O15444 150 aa11.17□□□□□ -0.62
SMN2-213ENST00000614240 TAGLN2P37802 199 aaKnown RBP11.17□□□□□ -0.62
SMN2-213ENST00000614240 REG3GQ6UW15 175 aa11.17□□□□□ -0.62
SMN2-213ENST00000614240 OCC1Q8TAD7 63 aa11.17□□□□□ -0.62
SMN2-213ENST00000614240 PKHD1L1Q86WI1 4243 aa11.17□□□□□ -0.62
SMN2-213ENST00000614240 IGHV1-58A0A0C4DH39 117 aa11.16□□□□□ -0.62
SMN2-213ENST00000614240 K7EN84 100 aa11.16□□□□□ -0.62
SMN2-213ENST00000614240 SPINK6Q6UWN8 80 aa11.16□□□□□ -0.62
SMN2-213ENST00000614240 LINC00526Q96FQ7 95 aa11.16□□□□□ -0.62
SMN2-213ENST00000614240 CARD19Q96LW7 228 aa11.16□□□□□ -0.62
SMN2-213ENST00000614240 A0A0J9YXV3 536 aa11.15□□□□□ -0.62
SMN2-213ENST00000614240 LINC00959A0A1B0GUT2 108 aa11.15□□□□□ -0.62
SMN2-213ENST00000614240 SS18Q15532 418 aa11.15□□□□□ -0.62
SMN2-213ENST00000614240 ZNF561-AS1K7EIQ3 104 aa11.14□□□□□ -0.63
SMN2-213ENST00000614240 GATCO43716 136 aaKnown RBP11.14□□□□□ -0.63
SMN2-213ENST00000614240 ODF1Q14990 250 aa11.14□□□□□ -0.63
SMN2-213ENST00000614240 BORCS7Q96B45 105 aa11.14□□□□□ -0.63
SMN2-213ENST00000614240 FAM231BA6NCW3 169 aa11.13□□□□□ -0.63
SMN2-213ENST00000614240 SYCNQ0VAF6 134 aa11.13□□□□□ -0.63
SMN2-213ENST00000614240 Q6ZRP5 223 aa11.13□□□□□ -0.63
SMN2-213ENST00000614240 MRAP2Q96G30 205 aa11.13□□□□□ -0.63
SMN2-213ENST00000614240 ST20Q9HBF5 79 aa11.13□□□□□ -0.63
SMN2-213ENST00000614240 A8MWL6 223 aa11.12□□□□□ -0.63
SMN2-213ENST00000614240 TMEM242Q9NWH2 141 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms