RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 IFI27P40305 119 aaPredicted RBP10.1□□□□□ -0.79
CD48-203ENST00000613788 AMTP48728 403 aa10.1□□□□□ -0.79
CD48-203ENST00000613788 UPK3BQ9BT76 320 aa10.1□□□□□ -0.79
CD48-203ENST00000613788 TMEM243Q9BU79 118 aa10.09□□□□□ -0.79
CD48-203ENST00000613788 RAB5BP61020 215 aa10.08□□□□□ -0.8
CD48-203ENST00000613788 FA2HQ7L5A8 372 aa10.08□□□□□ -0.8
CD48-203ENST00000613788 CHCHD5Q9BSY4 110 aa10.08□□□□□ -0.8
CD48-203ENST00000613788 C1orf196B1AJZ1 125 aa10.07□□□□□ -0.8
CD48-203ENST00000613788 PKIAP61925 76 aa10.07□□□□□ -0.8
CD48-203ENST00000613788 Q0VG73 95 aa10.07□□□□□ -0.8
CD48-203ENST00000613788 ORMDL2Q53FV1 153 aa10.07□□□□□ -0.8
CD48-203ENST00000613788 TENM2Q9NT68 2774 aa10.07□□□□□ -0.8
CD48-203ENST00000613788 H7C423 109 aa10.07□□□□□ -0.8
CD48-203ENST00000613788 UBE2L6O14933 153 aa10.07□□□□□ -0.8
CD48-203ENST00000613788 LINC00614P0C842 121 aa10.07□□□□□ -0.8
CD48-203ENST00000613788 ESDP10768 282 aa10.07□□□□□ -0.8
CD48-203ENST00000613788 LAGE3Q14657 143 aa10.07□□□□□ -0.8
CD48-203ENST00000613788 NIT1Q86X76 327 aa10.07□□□□□ -0.8
CD48-203ENST00000613788 TMEM18Q96B42 140 aa10.07□□□□□ -0.8
CD48-203ENST00000613788 CHCHD7Q9BUK0 85 aa10.07□□□□□ -0.8
CD48-203ENST00000613788 TMEM262E9PQX1 116 aa10.06□□□□□ -0.8
CD48-203ENST00000613788 SIVA1O15304 175 aa10.06□□□□□ -0.8
CD48-203ENST00000613788 LY6G6CO95867 125 aa10.06□□□□□ -0.8
CD48-203ENST00000613788 G0S2P27469 103 aa10.06□□□□□ -0.8
CD48-203ENST00000613788 BAGE3Q86Y29 109 aa10.06□□□□□ -0.8
CD48-203ENST00000613788 WFDC10BQ8IUB3 73 aa10.06□□□□□ -0.8
CD48-203ENST00000613788 LINC00476Q8WZB0 136 aa10.06□□□□□ -0.8
CD48-203ENST00000613788 Q9H8V8 135 aa10.06□□□□□ -0.8
CD48-203ENST00000613788 TMA7Q9Y2S6 64 aaKnown RBP10.06□□□□□ -0.8
CD48-203ENST00000613788 LOC105371267A0A1B0GV96 52 aa10.05□□□□□ -0.8
CD48-203ENST00000613788 LINC01546A6NGU7 62 aa10.05□□□□□ -0.8
CD48-203ENST00000613788 AP5S1Q9NUS5 200 aa10.05□□□□□ -0.8
CD48-203ENST00000613788 A0A087WX48 190 aa10.04□□□□□ -0.8
CD48-203ENST00000613788 HIST1H2BKO60814 126 aa10.04□□□□□ -0.8
CD48-203ENST00000613788 HIST1H2BJP06899 126 aa10.04□□□□□ -0.8
CD48-203ENST00000613788 HIST1H2BOP23527 126 aa10.04□□□□□ -0.8
CD48-203ENST00000613788 HIST1H2BBP33778 126 aa10.04□□□□□ -0.8
CD48-203ENST00000613788 HIST1H2BDP58876 126 aa10.04□□□□□ -0.8
CD48-203ENST00000613788 HIST1H2BCP62807 126 aa10.04□□□□□ -0.8
CD48-203ENST00000613788 SMAGPQ0VAQ4 97 aa10.04□□□□□ -0.8
CD48-203ENST00000613788 GAGE6Q13070 117 aa10.04□□□□□ -0.8
CD48-203ENST00000613788 HIST2H2BEQ16778 126 aa10.04□□□□□ -0.8
CD48-203ENST00000613788 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.04□□□□□ -0.8
CD48-203ENST00000613788 C20orf203Q8NBC4 194 aa10.04□□□□□ -0.8
CD48-203ENST00000613788 HIST1H2BHQ93079 126 aa10.04□□□□□ -0.8
CD48-203ENST00000613788 HIST1H2BNQ99877 126 aa10.04□□□□□ -0.8
CD48-203ENST00000613788 HIST1H2BMQ99879 126 aa10.04□□□□□ -0.8
CD48-203ENST00000613788 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.03□□□□□ -0.8
CD48-203ENST00000613788 IGKV2-29A2NJV5 120 aaPredicted RBP10.03□□□□□ -0.8
CD48-203ENST00000613788 DNAH10OSP0CZ25 163 aa10.03□□□□□ -0.8
CD48-203ENST00000613788 LINC01556Q5JQF7 62 aa10.03□□□□□ -0.8
CD48-203ENST00000613788 RNASEKQ6P5S7 137 aaKnown RBP10.03□□□□□ -0.8
CD48-203ENST00000613788 CHCHD1Q96BP2 118 aaKnown RBP10.03□□□□□ -0.8
CD48-203ENST00000613788 TRAV9-2A0A087WT02 112 aa10.02□□□□□ -0.8
CD48-203ENST00000613788 AMMECR1LQ6DCA0 310 aa10.02□□□□□ -0.8
CD48-203ENST00000613788 K7EP13 123 aa10.02□□□□□ -0.81
CD48-203ENST00000613788 URB1-AS1Q96HZ7 61 aa10.02□□□□□ -0.81
CD48-203ENST00000613788 CYSLTR1Q9Y271 337 aa10.02□□□□□ -0.81
CD48-203ENST00000613788 A0A1B0GUV1 79 aa10.01□□□□□ -0.81
CD48-203ENST00000613788 LINC01549A6NIU2 74 aa10.01□□□□□ -0.81
CD48-203ENST00000613788 FGF6P10767 208 aa10.01□□□□□ -0.81
CD48-203ENST00000613788 ZNF25P17030 456 aaPredicted RBP10.01□□□□□ -0.81
CD48-203ENST00000613788 BTF3P20290 206 aaKnown RBP10.01□□□□□ -0.81
CD48-203ENST00000613788 C2orf66Q6UXQ4 117 aa10.01□□□□□ -0.81
CD48-203ENST00000613788 TMEM101Q96IK0 257 aa10.01□□□□□ -0.81
CD48-203ENST00000613788 HSBP1O75506 76 aa10□□□□□ -0.81
CD48-203ENST00000613788 IGHV3-30P01768 117 aa10□□□□□ -0.81
CD48-203ENST00000613788 IGHV3-33P01772 117 aa10□□□□□ -0.81
CD48-203ENST00000613788 IGHV3-30-3P0DP02 117 aa10□□□□□ -0.81
CD48-203ENST00000613788 IGHV3-30-5P0DP03 117 aa10□□□□□ -0.81
CD48-203ENST00000613788 RBX1P62877 108 aa10□□□□□ -0.81
CD48-203ENST00000613788 MPV17L2Q567V2 206 aa10□□□□□ -0.81
CD48-203ENST00000613788 DGAT2L7PQ6IED9 249 aa10□□□□□ -0.81
CD48-203ENST00000613788 MRPL52Q86TS9 123 aaKnown RBP10□□□□□ -0.81
CD48-203ENST00000613788 VPS13DQ5THJ4 4388 aa9.99□□□□□ -0.81
CD48-203ENST00000613788 LYSTQ99698 3801 aa9.99□□□□□ -0.81
CD48-203ENST00000613788 RPL39P62891 51 aaKnown RBP9.99□□□□□ -0.81
CD48-203ENST00000613788 C10orf126Q8N4M7 172 aa9.99□□□□□ -0.81
CD48-203ENST00000613788 TIMM21Q9BVV7 248 aa9.99□□□□□ -0.81
CD48-203ENST00000613788 UBE2D4Q9Y2X8 147 aa9.99□□□□□ -0.81
CD48-203ENST00000613788 CSDC2Q9Y534 153 aaKnown RBP9.99□□□□□ -0.81
CD48-203ENST00000613788 LCE6AA0A183 80 aa9.98□□□□□ -0.81
CD48-203ENST00000613788 SERF1AO75920 110 aa9.98□□□□□ -0.81
CD48-203ENST00000613788 TTC32Q5I0X7 151 aa9.98□□□□□ -0.81
CD48-203ENST00000613788 Q8N976 141 aa9.98□□□□□ -0.81
CD48-203ENST00000613788 OR5A1Q8NGJ0 315 aa9.98□□□□□ -0.81
CD48-203ENST00000613788 TOMM6Q96B49 74 aa9.98□□□□□ -0.81
CD48-203ENST00000613788 SPANXA1Q9NS26 97 aa9.98□□□□□ -0.81
CD48-203ENST00000613788 ALMS1Q8TCU4 4167 aa9.98□□□□□ -0.81
CD48-203ENST00000613788 HBDP02042 147 aa9.97□□□□□ -0.81
CD48-203ENST00000613788 ANGP03950 147 aaKnown RBP9.97□□□□□ -0.81
CD48-203ENST00000613788 NDUFA6P56556 154 aa9.97□□□□□ -0.81
CD48-203ENST00000613788 Q8N3U1 123 aa9.97□□□□□ -0.81
CD48-203ENST00000613788 PYGO1Q9Y3Y4 419 aa9.97□□□□□ -0.81
CD48-203ENST00000613788 NBDYA0A0U1RRE5 68 aa9.97□□□□□ -0.81
CD48-203ENST00000613788 DNAH1Q9P2D7 4330 aa9.96□□□□□ -0.81
CD48-203ENST00000613788 IGLV4-60A0A075B6I1 120 aa9.96□□□□□ -0.82
CD48-203ENST00000613788 COA6Q5JTJ3 125 aaKnown RBP9.96□□□□□ -0.82
CD48-203ENST00000613788 ERASQ7Z444 233 aa9.96□□□□□ -0.82
CD48-203ENST00000613788 KLK12Q9UKR0 248 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms