RNA–Protein interactions for RNA: ENST00000613593.1

PCDHA12-202, Transcript of protocadherin alpha 12, humanhuman

BASIC

Gene PCDHA12, Length 2,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA12-202ENST00000613593 DUX5Q96PT3 197 aa12.79□□□□□ -0.36
PCDHA12-202ENST00000613593 TRAV8-4A0A0B4J246 113 aa12.79□□□□□ -0.36
PCDHA12-202ENST00000613593 KNCNA6PVL3 124 aa12.79□□□□□ -0.36
PCDHA12-202ENST00000613593 NDUFV3P56181 108 aaKnown RBP12.79□□□□□ -0.36
PCDHA12-202ENST00000613593 GAGE5Q13069 117 aa12.79□□□□□ -0.36
PCDHA12-202ENST00000613593 GAGE6Q13070 117 aa12.79□□□□□ -0.36
PCDHA12-202ENST00000613593 CLEC2BQ92478 149 aa12.79□□□□□ -0.36
PCDHA12-202ENST00000613593 ICOSQ9Y6W8 199 aa12.79□□□□□ -0.36
PCDHA12-202ENST00000613593 H7C423 109 aa12.78□□□□□ -0.36
PCDHA12-202ENST00000613593 K7EQG2 157 aa12.78□□□□□ -0.36
PCDHA12-202ENST00000613593 MRPS36P82909 103 aaKnown RBP12.78□□□□□ -0.36
PCDHA12-202ENST00000613593 NDUFA12Q9UI09 145 aa12.78□□□□□ -0.36
PCDHA12-202ENST00000613593 MSMBP08118 114 aa12.78□□□□□ -0.36
PCDHA12-202ENST00000613593 SNRPD3P62318 126 aaKnown RBP12.78□□□□□ -0.36
PCDHA12-202ENST00000613593 C2orf82Q6UX34 121 aa12.78□□□□□ -0.36
PCDHA12-202ENST00000613593 H3BMM0 161 aa12.77□□□□□ -0.36
PCDHA12-202ENST00000613593 RPL13AP40429 203 aaKnown RBP12.77□□□□□ -0.36
PCDHA12-202ENST00000613593 C15orf53Q8NAA6 179 aa12.77□□□□□ -0.36
PCDHA12-202ENST00000613593 UBE2WQ96B02 151 aa12.77□□□□□ -0.36
PCDHA12-202ENST00000613593 PKD1L2Q7Z442 2459 aa12.77□□□□□ -0.36
PCDHA12-202ENST00000613593 AVPP01185 164 aa12.77□□□□□ -0.37
PCDHA12-202ENST00000613593 CFAP161Q6P656 301 aa12.77□□□□□ -0.37
PCDHA12-202ENST00000613593 IGHV1-58A0A0C4DH39 117 aa12.76□□□□□ -0.37
PCDHA12-202ENST00000613593 DAND5Q8N907 189 aa12.76□□□□□ -0.37
PCDHA12-202ENST00000613593 CCDC179H3BU77 68 aa12.76□□□□□ -0.37
PCDHA12-202ENST00000613593 PSMB8P28062 276 aa12.76□□□□□ -0.37
PCDHA12-202ENST00000613593 Q6ZSN1 163 aa12.76□□□□□ -0.37
PCDHA12-202ENST00000613593 PYGO1Q9Y3Y4 419 aa12.76□□□□□ -0.37
PCDHA12-202ENST00000613593 CSMD2Q7Z408 3487 aa12.76□□□□□ -0.37
PCDHA12-202ENST00000613593 SYNJ2BPP57105 145 aa12.76□□□□□ -0.37
PCDHA12-202ENST00000613593 LINC01600Q96MT4 127 aa12.76□□□□□ -0.37
PCDHA12-202ENST00000613593 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.75□□□□□ -0.37
PCDHA12-202ENST00000613593 IGKV2-29A2NJV5 120 aaPredicted RBP12.75□□□□□ -0.37
PCDHA12-202ENST00000613593 VSIG2Q96IQ7 327 aa12.75□□□□□ -0.37
PCDHA12-202ENST00000613593 MIAQ16674 131 aa12.74□□□□□ -0.37
PCDHA12-202ENST00000613593 TTC32Q5I0X7 151 aa12.74□□□□□ -0.37
PCDHA12-202ENST00000613593 DUX3Q96PT4 197 aa12.74□□□□□ -0.37
PCDHA12-202ENST00000613593 SPANXDQ9BXN6 97 aa12.74□□□□□ -0.37
PCDHA12-202ENST00000613593 SPANXCQ9NY87 97 aa12.74□□□□□ -0.37
PCDHA12-202ENST00000613593 NACAE9PAV3 2078 aa12.74□□□□□ -0.37
PCDHA12-202ENST00000613593 IFITM1P13164 125 aa12.73□□□□□ -0.37
PCDHA12-202ENST00000613593 CHCHD7Q9BUK0 85 aa12.73□□□□□ -0.37
PCDHA12-202ENST00000613593 TNFRSF18Q9Y5U5 241 aa12.73□□□□□ -0.37
PCDHA12-202ENST00000613593 TRGV11A0A075B6L2 103 aa12.72□□□□□ -0.37
PCDHA12-202ENST00000613593 IGHV3-38A0A0C4DH36 116 aa12.72□□□□□ -0.37
PCDHA12-202ENST00000613593 B4DSR2 109 aa12.72□□□□□ -0.37
PCDHA12-202ENST00000613593 UBE2D4Q9Y2X8 147 aa12.71□□□□□ -0.37
PCDHA12-202ENST00000613593 IGHV4-59P01825 116 aa12.71□□□□□ -0.38
PCDHA12-202ENST00000613593 TMEM61Q8N0U2 210 aa12.71□□□□□ -0.38
PCDHA12-202ENST00000613593 TINCRA0A1B0GVN0 87 aa12.7□□□□□ -0.38
PCDHA12-202ENST00000613593 LINC00467Q9BRT7 94 aa12.7□□□□□ -0.38
PCDHA12-202ENST00000613593 CFAP46Q8IYW2 2715 aa12.7□□□□□ -0.38
PCDHA12-202ENST00000613593 GAGE12JA6NER3 117 aa12.69□□□□□ -0.38
PCDHA12-202ENST00000613593 LST1O00453 97 aa12.69□□□□□ -0.38
PCDHA12-202ENST00000613593 GAGE7O76087 117 aa12.69□□□□□ -0.38
PCDHA12-202ENST00000613593 COX6CP09669 75 aa12.69□□□□□ -0.38
PCDHA12-202ENST00000613593 GAGE12FP0CL80 117 aa12.69□□□□□ -0.38
PCDHA12-202ENST00000613593 GAGE12GP0CL81 117 aa12.69□□□□□ -0.38
PCDHA12-202ENST00000613593 GAGE12IP0CL82 117 aa12.69□□□□□ -0.38
PCDHA12-202ENST00000613593 GAGE4Q13068 117 aa12.69□□□□□ -0.38
PCDHA12-202ENST00000613593 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.69□□□□□ -0.38
PCDHA12-202ENST00000613593 CDKN2A-AS1Q9UH64 79 aa12.69□□□□□ -0.38
PCDHA12-202ENST00000613593 Q6Q795 121 aa12.68□□□□□ -0.38
PCDHA12-202ENST00000613593 NRGNQ92686 78 aa12.68□□□□□ -0.38
PCDHA12-202ENST00000613593 CUBNO60494 3623 aa12.68□□□□□ -0.38
PCDHA12-202ENST00000613593 PIEZO1Q92508 2521 aa12.68□□□□□ -0.38
PCDHA12-202ENST00000613593 H3BT86 120 aa12.68□□□□□ -0.38
PCDHA12-202ENST00000613593 DOPEY1Q5JWR5 2465 aa12.67□□□□□ -0.38
PCDHA12-202ENST00000613593 ZANQ9Y493 2812 aa12.67□□□□□ -0.38
PCDHA12-202ENST00000613593 A0A0U1RRA0 63 aa12.67□□□□□ -0.38
PCDHA12-202ENST00000613593 RBMY1BA6NDE4 496 aaKnown RBP12.67□□□□□ -0.38
PCDHA12-202ENST00000613593 RBMY1EA6NEQ0 496 aaKnown RBP12.67□□□□□ -0.38
PCDHA12-202ENST00000613593 RBMY1DP0C7P1 496 aaKnown RBP12.67□□□□□ -0.38
PCDHA12-202ENST00000613593 DSCR9P59020 149 aa12.67□□□□□ -0.38
PCDHA12-202ENST00000613593 CITED2Q99967 270 aaPredicted RBP12.67□□□□□ -0.38
PCDHA12-202ENST00000613593 EDA2RQ9HAV5 297 aa12.67□□□□□ -0.38
PCDHA12-202ENST00000613593 DEFB112Q30KQ8 113 aa12.66□□□□□ -0.38
PCDHA12-202ENST00000613593 COX6A2Q02221 97 aa12.66□□□□□ -0.38
PCDHA12-202ENST00000613593 ZNF625Q96I27 306 aaPredicted RBP12.66□□□□□ -0.38
PCDHA12-202ENST00000613593 CACNA1AO00555 2505 aa12.65□□□□□ -0.38
PCDHA12-202ENST00000613593 DEFB131AP59861 70 aa12.65□□□□□ -0.38
PCDHA12-202ENST00000613593 TMEM101Q96IK0 257 aa12.65□□□□□ -0.38
PCDHA12-202ENST00000613593 HOXD3P31249 432 aaPredicted RBP12.65□□□□□ -0.39
PCDHA12-202ENST00000613593 RNF152Q8N8N0 203 aa12.65□□□□□ -0.39
PCDHA12-202ENST00000613593 SPANXA1Q9NS26 97 aa12.65□□□□□ -0.39
PCDHA12-202ENST00000613593 YAE1D1Q9NRH1 226 aa12.63□□□□□ -0.39
PCDHA12-202ENST00000613593 UTP20O75691 2785 aaKnown RBP12.63□□□□□ -0.39
PCDHA12-202ENST00000613593 LINC01356Q8N9X3 169 aa12.63□□□□□ -0.39
PCDHA12-202ENST00000613593 USP9XQ93008 2570 aaPredicted RBP12.62□□□□□ -0.39
PCDHA12-202ENST00000613593 DEFB121Q5J5C9 76 aa12.62□□□□□ -0.39
PCDHA12-202ENST00000613593 C18orf65Q6ZTR6 163 aa12.62□□□□□ -0.39
PCDHA12-202ENST00000613593 FLNCQ14315 2725 aa12.62□□□□□ -0.39
PCDHA12-202ENST00000613593 DEFB136Q30KP8 78 aa12.62□□□□□ -0.39
PCDHA12-202ENST00000613593 CHCHD5Q9BSY4 110 aa12.62□□□□□ -0.39
PCDHA12-202ENST00000613593 IGSF10Q6WRI0 2623 aa12.61□□□□□ -0.39
PCDHA12-202ENST00000613593 USP9YO00507 2555 aaPredicted RBP12.61□□□□□ -0.39
PCDHA12-202ENST00000613593 NDUFA1O15239 70 aa12.61□□□□□ -0.39
PCDHA12-202ENST00000613593 NDUFA7O95182 113 aa12.61□□□□□ -0.39
PCDHA12-202ENST00000613593 MXRA5Q9NR99 2828 aa12.6□□□□□ -0.39
PCDHA12-202ENST00000613593 A0A096LNT2 108 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms