RNA–Protein interactions for RNA: ENST00000612540.1

PRKN-210, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 603 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-210ENST00000612540 HIST1H2BMQ99879 126 aa8.91□□□□□ -0.98
PRKN-210ENST00000612540 NXT2Q9NPJ8 142 aaKnown RBP8.91□□□□□ -0.98
PRKN-210ENST00000612540 RPL32P62910 135 aaKnown RBP8.9□□□□□ -0.98
PRKN-210ENST00000612540 Q8N8P6 123 aa8.9□□□□□ -0.98
PRKN-210ENST00000612540 TRBV27A0A0K0K1C4 114 aa8.89□□□□□ -0.99
PRKN-210ENST00000612540 TCAPO15273 167 aa8.89□□□□□ -0.99
PRKN-210ENST00000612540 AMTP48728 403 aa8.89□□□□□ -0.99
PRKN-210ENST00000612540 GTSF1LQ9H1H1 148 aa8.89□□□□□ -0.99
PRKN-210ENST00000612540 ALMS1Q8TCU4 4167 aa8.89□□□□□ -0.99
PRKN-210ENST00000612540 TSHBP01222 138 aa8.88□□□□□ -0.99
PRKN-210ENST00000612540 TMEM97Q5BJF2 176 aa8.88□□□□□ -0.99
PRKN-210ENST00000612540 IGLV2-18A0A075B6J9 118 aa8.87□□□□□ -0.99
PRKN-210ENST00000612540 IGHV1-24A0A0C4DH33 117 aa8.87□□□□□ -0.99
PRKN-210ENST00000612540 PRSS47A8MTI9 375 aa8.87□□□□□ -0.99
PRKN-210ENST00000612540 NDUFA6P56556 154 aa8.87□□□□□ -0.99
PRKN-210ENST00000612540 Q0VG73 95 aa8.87□□□□□ -0.99
PRKN-210ENST00000612540 NIT1Q86X76 327 aa8.87□□□□□ -0.99
PRKN-210ENST00000612540 AP5S1Q9NUS5 200 aa8.87□□□□□ -0.99
PRKN-210ENST00000612540 TMA7Q9Y2S6 64 aaKnown RBP8.87□□□□□ -0.99
PRKN-210ENST00000612540 TRBV25-1A0A075B6N4 114 aa8.86□□□□□ -0.99
PRKN-210ENST00000612540 SERF1AO75920 110 aa8.86□□□□□ -0.99
PRKN-210ENST00000612540 LAGE3Q14657 143 aa8.86□□□□□ -0.99
PRKN-210ENST00000612540 LYPD5Q6UWN5 251 aa8.86□□□□□ -0.99
PRKN-210ENST00000612540 UBE2DNLQ8IWF7 75 aa8.86□□□□□ -0.99
PRKN-210ENST00000612540 APLNQ9ULZ1 77 aa8.86□□□□□ -0.99
PRKN-210ENST00000612540 TRBV6-8A0A0A6YYG3 113 aa8.85□□□□□ -0.99
PRKN-210ENST00000612540 LINC00614P0C842 121 aa8.85□□□□□ -0.99
PRKN-210ENST00000612540 CCL18P55774 89 aa8.85□□□□□ -0.99
PRKN-210ENST00000612540 TCTAP57738 103 aa8.85□□□□□ -0.99
PRKN-210ENST00000612540 ESRGQ1W209 222 aa8.85□□□□□ -0.99
PRKN-210ENST00000612540 ORMDL2Q53FV1 153 aa8.85□□□□□ -0.99
PRKN-210ENST00000612540 LELP1Q5T871 98 aa8.85□□□□□ -0.99
PRKN-210ENST00000612540 NTM-AS1Q6ZSK4 140 aa8.85□□□□□ -0.99
PRKN-210ENST00000612540 URB1-AS1Q96HZ7 61 aa8.85□□□□□ -0.99
PRKN-210ENST00000612540 CHCHD5Q9BSY4 110 aa8.85□□□□□ -0.99
PRKN-210ENST00000612540 TMEM243Q9BU79 118 aa8.85□□□□□ -0.99
PRKN-210ENST00000612540 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.84□□□□□ -0.99
PRKN-210ENST00000612540 TRAV8-6A0A0B4J262 113 aa8.84□□□□□ -0.99
PRKN-210ENST00000612540 IGKV2-29A2NJV5 120 aaPredicted RBP8.84□□□□□ -0.99
PRKN-210ENST00000612540 UBE2L6O14933 153 aa8.84□□□□□ -0.99
PRKN-210ENST00000612540 HSBP1O75506 76 aa8.84□□□□□ -0.99
PRKN-210ENST00000612540 S100A6P06703 90 aa8.84□□□□□ -0.99
PRKN-210ENST00000612540 BTF3P20290 206 aaKnown RBP8.84□□□□□ -0.99
PRKN-210ENST00000612540 TIRAPP58753 221 aa8.84□□□□□ -0.99
PRKN-210ENST00000612540 CHCHD1Q96BP2 118 aaKnown RBP8.84□□□□□ -0.99
PRKN-210ENST00000612540 K7EMI3 77 aa8.83□□□□□ -1
PRKN-210ENST00000612540 GAGE6Q13070 117 aa8.83□□□□□ -1
PRKN-210ENST00000612540 PMCHL1Q16048 86 aa8.83□□□□□ -1
PRKN-210ENST00000612540 CHCHD7Q9BUK0 85 aa8.83□□□□□ -1
PRKN-210ENST00000612540 LINC00310P59036 64 aa8.82□□□□□ -1
PRKN-210ENST00000612540 TMEM18Q96B42 140 aa8.82□□□□□ -1
PRKN-210ENST00000612540 CYSLTR1Q9Y271 337 aa8.82□□□□□ -1
PRKN-210ENST00000612540 LINC00588Q9Y4M8 146 aa8.82□□□□□ -1
PRKN-210ENST00000612540 LINC01546A6NGU7 62 aa8.81□□□□□ -1
PRKN-210ENST00000612540 TMEM262E9PQX1 116 aa8.81□□□□□ -1
PRKN-210ENST00000612540 NUPR1O60356 82 aa8.81□□□□□ -1
PRKN-210ENST00000612540 HBDP02042 147 aa8.81□□□□□ -1
PRKN-210ENST00000612540 ESDP10768 282 aa8.81□□□□□ -1
PRKN-210ENST00000612540 RPL39P62891 51 aaKnown RBP8.81□□□□□ -1
PRKN-210ENST00000612540 AMMECR1LQ6DCA0 310 aa8.81□□□□□ -1
PRKN-210ENST00000612540 C2orf66Q6UXQ4 117 aa8.81□□□□□ -1
PRKN-210ENST00000612540 FAM19A2Q8N3H0 131 aa8.81□□□□□ -1
PRKN-210ENST00000612540 C20orf203Q8NBC4 194 aa8.81□□□□□ -1
PRKN-210ENST00000612540 MRPS16Q9Y3D3 137 aaKnown RBP8.81□□□□□ -1
PRKN-210ENST00000612540 KMT2AQ03164 3969 aa8.8□□□□□ -1
PRKN-210ENST00000612540 FRAS1Q86XX4 4008 aa8.8□□□□□ -1
PRKN-210ENST00000612540 G0S2P27469 103 aa8.8□□□□□ -1
PRKN-210ENST00000612540 PDZD11Q5EBL8 140 aa8.8□□□□□ -1
PRKN-210ENST00000612540 WFDC10BQ8IUB3 73 aa8.8□□□□□ -1
PRKN-210ENST00000612540 A0A087WX48 190 aa8.79□□□□□ -1
PRKN-210ENST00000612540 FGF6P10767 208 aa8.79□□□□□ -1
PRKN-210ENST00000612540 PKIAP61925 76 aa8.79□□□□□ -1
PRKN-210ENST00000612540 SMAGPQ0VAQ4 97 aa8.79□□□□□ -1
PRKN-210ENST00000612540 COA6Q5JTJ3 125 aaKnown RBP8.79□□□□□ -1
PRKN-210ENST00000612540 DGAT2L7PQ6IED9 249 aa8.79□□□□□ -1
PRKN-210ENST00000612540 IGHV3-30P01768 117 aa8.78□□□□□ -1
PRKN-210ENST00000612540 IGHV3-33P01772 117 aa8.78□□□□□ -1
PRKN-210ENST00000612540 IGHV3-30-3P0DP02 117 aa8.78□□□□□ -1
PRKN-210ENST00000612540 IGHV3-30-5P0DP03 117 aa8.78□□□□□ -1
PRKN-210ENST00000612540 TMEM101Q96IK0 257 aa8.78□□□□□ -1
PRKN-210ENST00000612540 A0A096LNJ9 63 aa8.77□□□□□ -1.01
PRKN-210ENST00000612540 H7C423 109 aa8.77□□□□□ -1.01
PRKN-210ENST00000612540 S100A2P29034 98 aa8.77□□□□□ -1.01
PRKN-210ENST00000612540 SNRPEP62304 92 aaKnown RBP8.77□□□□□ -1.01
PRKN-210ENST00000612540 MPV17L2Q567V2 206 aa8.77□□□□□ -1.01
PRKN-210ENST00000612540 OR5A1Q8NGJ0 315 aa8.77□□□□□ -1.01
PRKN-210ENST00000612540 TOMM6Q96B49 74 aa8.77□□□□□ -1.01
PRKN-210ENST00000612540 SCGB3A1Q96QR1 104 aa8.77□□□□□ -1.01
PRKN-210ENST00000612540 SIVA1O15304 175 aa8.76□□□□□ -1.01
PRKN-210ENST00000612540 FABP4P15090 132 aa8.76□□□□□ -1.01
PRKN-210ENST00000612540 RBX1P62877 108 aa8.76□□□□□ -1.01
PRKN-210ENST00000612540 Q8N3U1 123 aa8.76□□□□□ -1.01
PRKN-210ENST00000612540 Q8N976 141 aa8.76□□□□□ -1.01
PRKN-210ENST00000612540 SPANXA1Q9NS26 97 aa8.76□□□□□ -1.01
PRKN-210ENST00000612540 UBE2D4Q9Y2X8 147 aa8.76□□□□□ -1.01
PRKN-210ENST00000612540 LINC01549A6NIU2 74 aa8.75□□□□□ -1.01
PRKN-210ENST00000612540 LEPROTL1O95214 131 aa8.75□□□□□ -1.01
PRKN-210ENST00000612540 ZNF25P17030 456 aaPredicted RBP8.75□□□□□ -1.01
PRKN-210ENST00000612540 UPK3BQ9BT76 320 aa8.75□□□□□ -1.01
PRKN-210ENST00000612540 DNAH10Q8IVF4 4471 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms