RNA–Protein interactions for RNA: ENST00000611577.4

MUC1-224, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-224ENST00000611577 FAM104BQ5XKR9 115 aa11.92□□□□□ -0.5
MUC1-224ENST00000611577 Q6ZRN7 208 aaPredicted RBP11.92□□□□□ -0.5
MUC1-224ENST00000611577 ST20Q9HBF5 79 aa11.92□□□□□ -0.5
MUC1-224ENST00000611577 A0A1B0GXF2 115 aa11.91□□□□□ -0.5
MUC1-224ENST00000611577 NCR2O95944 276 aa11.91□□□□□ -0.5
MUC1-224ENST00000611577 PPP1R17O96001 155 aa11.91□□□□□ -0.5
MUC1-224ENST00000611577 APOC3P02656 99 aa11.91□□□□□ -0.5
MUC1-224ENST00000611577 PKIAP61925 76 aa11.91□□□□□ -0.5
MUC1-224ENST00000611577 RHEBQ15382 184 aa11.91□□□□□ -0.5
MUC1-224ENST00000611577 NFE4Q86UQ8 179 aa11.91□□□□□ -0.5
MUC1-224ENST00000611577 NIT1Q86X76 327 aa11.91□□□□□ -0.5
MUC1-224ENST00000611577 IMMP2LQ96T52 175 aa11.91□□□□□ -0.5
MUC1-224ENST00000611577 RPS10P5Q9NQ39 176 aa11.91□□□□□ -0.5
MUC1-224ENST00000611577 PGPEP1Q9NXJ5 209 aa11.91□□□□□ -0.5
MUC1-224ENST00000611577 C7orf77A4D0Y5 90 aa11.9□□□□□ -0.5
MUC1-224ENST00000611577 SDHAF1A6NFY7 115 aa11.9□□□□□ -0.5
MUC1-224ENST00000611577 SMKR1H3BMG3 65 aa11.9□□□□□ -0.5
MUC1-224ENST00000611577 EREGO14944 169 aa11.9□□□□□ -0.5
MUC1-224ENST00000611577 PMCHP20382 165 aa11.9□□□□□ -0.5
MUC1-224ENST00000611577 CKS2P33552 79 aa11.9□□□□□ -0.5
MUC1-224ENST00000611577 Q5VSD8 79 aa11.9□□□□□ -0.5
MUC1-224ENST00000611577 CLRN3Q8NCR9 226 aa11.9□□□□□ -0.5
MUC1-224ENST00000611577 DEFB104AQ8WTQ1 72 aa11.9□□□□□ -0.5
MUC1-224ENST00000611577 UBE2L6O14933 153 aa11.89□□□□□ -0.51
MUC1-224ENST00000611577 AMTP48728 403 aa11.89□□□□□ -0.51
MUC1-224ENST00000611577 MRPL51Q4U2R6 128 aaKnown RBP11.89□□□□□ -0.51
MUC1-224ENST00000611577 NTM-AS1Q6ZSK4 140 aa11.89□□□□□ -0.51
MUC1-224ENST00000611577 TMEM243Q9BU79 118 aa11.89□□□□□ -0.51
MUC1-224ENST00000611577 TRBV6-5A0A0K0K1A5 114 aa11.88□□□□□ -0.51
MUC1-224ENST00000611577 GAS8-AS1O95177 125 aa11.88□□□□□ -0.51
MUC1-224ENST00000611577 RPS10P46783 165 aaKnown RBP11.88□□□□□ -0.51
MUC1-224ENST00000611577 XGP55808 180 aa11.88□□□□□ -0.51
MUC1-224ENST00000611577 ELOBQ15370 118 aa11.88□□□□□ -0.51
MUC1-224ENST00000611577 IQCJQ1A5X6 159 aa11.88□□□□□ -0.51
MUC1-224ENST00000611577 CDPF1Q6NVV7 123 aa11.88□□□□□ -0.51
MUC1-224ENST00000611577 SVBPQ8N300 66 aa11.88□□□□□ -0.51
MUC1-224ENST00000611577 Q8N3U1 123 aa11.88□□□□□ -0.51
MUC1-224ENST00000611577 CHCHD7Q9BUK0 85 aa11.88□□□□□ -0.51
MUC1-224ENST00000611577 Q9HAA7 133 aa11.88□□□□□ -0.51
MUC1-224ENST00000611577 IBA57-AS1B1ANH7 110 aa11.87□□□□□ -0.51
MUC1-224ENST00000611577 I3L3M4 83 aa11.87□□□□□ -0.51
MUC1-224ENST00000611577 SNAPINO95295 136 aa11.87□□□□□ -0.51
MUC1-224ENST00000611577 APCSP02743 223 aa11.87□□□□□ -0.51
MUC1-224ENST00000611577 GAGE6Q13070 117 aa11.87□□□□□ -0.51
MUC1-224ENST00000611577 TMEM242Q9NWH2 141 aa11.87□□□□□ -0.51
MUC1-224ENST00000611577 TRAV9-1A0A075B6T8 112 aa11.86□□□□□ -0.51
MUC1-224ENST00000611577 D6R8Y8 96 aa11.86□□□□□ -0.51
MUC1-224ENST00000611577 PSCAO43653 123 aa11.86□□□□□ -0.51
MUC1-224ENST00000611577 LAGE3Q14657 143 aa11.86□□□□□ -0.51
MUC1-224ENST00000611577 KLK12Q9UKR0 248 aa11.86□□□□□ -0.51
MUC1-224ENST00000611577 PPBPP02775 128 aa11.85□□□□□ -0.51
MUC1-224ENST00000611577 MPV17L2Q567V2 206 aa11.85□□□□□ -0.51
MUC1-224ENST00000611577 TMEM70Q9BUB7 260 aa11.85□□□□□ -0.51
MUC1-224ENST00000611577 FLG2Q5D862 2391 aaPredicted RBP11.85□□□□□ -0.51
MUC1-224ENST00000611577 TRAV8-3A0A0A6YYJ7 113 aa11.84□□□□□ -0.51
MUC1-224ENST00000611577 CRPP02741 224 aa11.84□□□□□ -0.51
MUC1-224ENST00000611577 ANGP03950 147 aaKnown RBP11.84□□□□□ -0.51
MUC1-224ENST00000611577 SUMO2P61956 95 aaKnown RBP11.84□□□□□ -0.51
MUC1-224ENST00000611577 ATRAIDQ6UW56 229 aa11.84□□□□□ -0.51
MUC1-224ENST00000611577 ORMDL3Q8N138 153 aa11.84□□□□□ -0.51
MUC1-224ENST00000611577 VCYO14598 125 aa11.83□□□□□ -0.52
MUC1-224ENST00000611577 FCER1GP30273 86 aa11.83□□□□□ -0.52
MUC1-224ENST00000611577 KRTAP10-1P60331 282 aa11.83□□□□□ -0.52
MUC1-224ENST00000611577 NRACQ8N912 160 aa11.83□□□□□ -0.52
MUC1-224ENST00000611577 KIR2DL4Q99706 377 aa11.83□□□□□ -0.52
MUC1-224ENST00000611577 TNFRSF6BO95407 300 aa11.82□□□□□ -0.52
MUC1-224ENST00000611577 AMMECR1LQ6DCA0 310 aa11.82□□□□□ -0.52
MUC1-224ENST00000611577 TMEM136Q6ZRR5 245 aa11.82□□□□□ -0.52
MUC1-224ENST00000611577 SLC7A5P1Q8MH63 180 aa11.82□□□□□ -0.52
MUC1-224ENST00000611577 Q8N976 141 aa11.82□□□□□ -0.52
MUC1-224ENST00000611577 UBE2WQ96B02 151 aa11.82□□□□□ -0.52
MUC1-224ENST00000611577 RMI2Q96E14 147 aa11.82□□□□□ -0.52
MUC1-224ENST00000611577 PRELID3AQ96N28 172 aa11.82□□□□□ -0.52
MUC1-224ENST00000611577 C20orf78Q9BR46 151 aa11.82□□□□□ -0.52
MUC1-224ENST00000611577 SRRM2Q9UQ35 2752 aaKnown RBP11.81□□□□□ -0.52
MUC1-224ENST00000611577 A0A087WTM6 91 aa11.81□□□□□ -0.52
MUC1-224ENST00000611577 TRBV27A0A0K0K1C4 114 aa11.81□□□□□ -0.52
MUC1-224ENST00000611577 POLR2KP53803 58 aaKnown RBP11.81□□□□□ -0.52
MUC1-224ENST00000611577 RBX1P62877 108 aa11.81□□□□□ -0.52
MUC1-224ENST00000611577 TM2D2Q9BX73 214 aa11.81□□□□□ -0.52
MUC1-224ENST00000611577 Q0VG73 95 aa11.8□□□□□ -0.52
MUC1-224ENST00000611577 RNASEKQ6P5S7 137 aaKnown RBP11.8□□□□□ -0.52
MUC1-224ENST00000611577 TRBV24-1A0A075B6N3 115 aa11.79□□□□□ -0.52
MUC1-224ENST00000611577 IGKV2D-24A0A075B6R9 120 aa11.79□□□□□ -0.52
MUC1-224ENST00000611577 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.79□□□□□ -0.52
MUC1-224ENST00000611577 IGKV2-29A2NJV5 120 aaPredicted RBP11.79□□□□□ -0.52
MUC1-224ENST00000611577 PHOX2AO14813 284 aa11.79□□□□□ -0.52
MUC1-224ENST00000611577 TSHBP01222 138 aa11.79□□□□□ -0.52
MUC1-224ENST00000611577 NPYP01303 97 aa11.79□□□□□ -0.52
MUC1-224ENST00000611577 SMR3BP02814 79 aaPredicted RBP11.79□□□□□ -0.52
MUC1-224ENST00000611577 H7C423 109 aa11.78□□□□□ -0.52
MUC1-224ENST00000611577 HLA-DQA1P01909 254 aa11.78□□□□□ -0.52
MUC1-224ENST00000611577 COX19Q49B96 90 aa11.78□□□□□ -0.52
MUC1-224ENST00000611577 CLPSL2Q6UWE3 100 aa11.78□□□□□ -0.52
MUC1-224ENST00000611577 SMIM2Q9BVW6 85 aa11.78□□□□□ -0.52
MUC1-224ENST00000611577 LAMTOR2Q9Y2Q5 125 aa11.78□□□□□ -0.52
MUC1-224ENST00000611577 TCAPO15273 167 aa11.77□□□□□ -0.53
MUC1-224ENST00000611577 LINC00269Q8N2A0 174 aa11.77□□□□□ -0.53
MUC1-224ENST00000611577 MAP1LC3AQ9H492 121 aa11.77□□□□□ -0.53
MUC1-224ENST00000611577 COX11Q9Y6N1 276 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms