RNA–Protein interactions for RNA: ENST00000610553.1

EWSR1-221, Transcript of EWS RNA binding protein 1, humanhuman

TSL 2

Gene EWSR1, Length 2,300 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-221ENST00000610553 GATA3P23771 443 aa12.49□□□□□ -0.41
EWSR1-221ENST00000610553 SPXQ9BT56 116 aa12.49□□□□□ -0.41
EWSR1-221ENST00000610553 PROK1P58294 105 aa12.48□□□□□ -0.41
EWSR1-221ENST00000610553 DUX5Q96PT3 197 aa12.48□□□□□ -0.41
EWSR1-221ENST00000610553 IGHV3-73A0A0B4J1V6 119 aa12.47□□□□□ -0.41
EWSR1-221ENST00000610553 ADARB2-AS1A8MUL3 147 aa12.47□□□□□ -0.41
EWSR1-221ENST00000610553 HOXD3P31249 432 aaPredicted RBP12.47□□□□□ -0.41
EWSR1-221ENST00000610553 GEMIN7Q9H840 131 aaKnown RBP12.47□□□□□ -0.41
EWSR1-221ENST00000610553 TRAV8-3A0A0A6YYJ7 113 aa12.46□□□□□ -0.41
EWSR1-221ENST00000610553 TMEM262E9PQX1 116 aa12.46□□□□□ -0.41
EWSR1-221ENST00000610553 CEMP1Q6PRD7 247 aaPredicted RBP12.46□□□□□ -0.41
EWSR1-221ENST00000610553 NACAE9PAV3 2078 aa12.46□□□□□ -0.41
EWSR1-221ENST00000610553 PRRC2AP48634 2157 aaKnown RBP12.46□□□□□ -0.41
EWSR1-221ENST00000610553 IGHV1-58A0A0C4DH39 117 aa12.46□□□□□ -0.41
EWSR1-221ENST00000610553 ATXN8Q156A1 80 aa12.46□□□□□ -0.41
EWSR1-221ENST00000610553 Q1RN00 199 aa12.46□□□□□ -0.41
EWSR1-221ENST00000610553 NRGNQ92686 78 aa12.46□□□□□ -0.41
EWSR1-221ENST00000610553 LINC01600Q96MT4 127 aa12.46□□□□□ -0.41
EWSR1-221ENST00000610553 TRBV30A0A0K0K1B3 111 aa12.45□□□□□ -0.42
EWSR1-221ENST00000610553 ZNF843Q8N446 348 aa12.45□□□□□ -0.42
EWSR1-221ENST00000610553 A8MTW9 85 aa12.45□□□□□ -0.42
EWSR1-221ENST00000610553 LINC01620Q4KN68 170 aa12.45□□□□□ -0.42
EWSR1-221ENST00000610553 SPANXDQ9BXN6 97 aa12.45□□□□□ -0.42
EWSR1-221ENST00000610553 SPANXCQ9NY87 97 aa12.45□□□□□ -0.42
EWSR1-221ENST00000610553 KNCNA6PVL3 124 aa12.44□□□□□ -0.42
EWSR1-221ENST00000610553 TRIAP1O43715 76 aa12.44□□□□□ -0.42
EWSR1-221ENST00000610553 HTN1P15515 57 aa12.44□□□□□ -0.42
EWSR1-221ENST00000610553 RNASE13Q5GAN3 156 aaKnown RBP12.44□□□□□ -0.42
EWSR1-221ENST00000610553 CHCHD7Q9BUK0 85 aa12.44□□□□□ -0.42
EWSR1-221ENST00000610553 Q9UF83 564 aa12.44□□□□□ -0.42
EWSR1-221ENST00000610553 TNFRSF18Q9Y5U5 241 aa12.44□□□□□ -0.42
EWSR1-221ENST00000610553 TENM4Q6N022 2769 aa12.44□□□□□ -0.42
EWSR1-221ENST00000610553 ZNF469Q96JG9 3925 aaPredicted RBP12.44□□□□□ -0.42
EWSR1-221ENST00000610553 CREBBPQ92793 2442 aa12.43□□□□□ -0.42
EWSR1-221ENST00000610553 TINCRA0A1B0GVN0 87 aa12.43□□□□□ -0.42
EWSR1-221ENST00000610553 Q5PR19 223 aa12.43□□□□□ -0.42
EWSR1-221ENST00000610553 ADAMTSL4-AS1Q5T5F5 129 aa12.43□□□□□ -0.42
EWSR1-221ENST00000610553 VSIG2Q96IQ7 327 aa12.43□□□□□ -0.42
EWSR1-221ENST00000610553 UBE2E2Q96LR5 201 aa12.43□□□□□ -0.42
EWSR1-221ENST00000610553 NDUFA12Q9UI09 145 aa12.43□□□□□ -0.42
EWSR1-221ENST00000610553 UBE2D4Q9Y2X8 147 aa12.43□□□□□ -0.42
EWSR1-221ENST00000610553 PIK3CD-AS1Q5SR53 167 aa12.43□□□□□ -0.42
EWSR1-221ENST00000610553 SPANXA1Q9NS26 97 aa12.43□□□□□ -0.42
EWSR1-221ENST00000610553 RBMY1BA6NDE4 496 aaKnown RBP12.42□□□□□ -0.42
EWSR1-221ENST00000610553 RBMY1EA6NEQ0 496 aaKnown RBP12.42□□□□□ -0.42
EWSR1-221ENST00000610553 RBMY1DP0C7P1 496 aaKnown RBP12.42□□□□□ -0.42
EWSR1-221ENST00000610553 Q6ZSN1 163 aa12.42□□□□□ -0.42
EWSR1-221ENST00000610553 NTN5Q8WTR8 489 aaPredicted RBP12.42□□□□□ -0.42
EWSR1-221ENST00000610553 TRAV26-1A0A087WT03 109 aa12.41□□□□□ -0.42
EWSR1-221ENST00000610553 H3BMM0 161 aa12.41□□□□□ -0.42
EWSR1-221ENST00000610553 PRM2P04554 102 aa12.41□□□□□ -0.42
EWSR1-221ENST00000610553 DEFB131AP59861 70 aa12.41□□□□□ -0.42
EWSR1-221ENST00000610553 MIAQ16674 131 aa12.41□□□□□ -0.42
EWSR1-221ENST00000610553 VPREB3Q9UKI3 123 aa12.41□□□□□ -0.42
EWSR1-221ENST00000610553 PRSS2P07478 247 aa12.4□□□□□ -0.42
EWSR1-221ENST00000610553 LINC01356Q8N9X3 169 aa12.4□□□□□ -0.42
EWSR1-221ENST00000610553 CITED1Q99966 193 aa12.4□□□□□ -0.42
EWSR1-221ENST00000610553 ZNF702PQ9H963 129 aa12.4□□□□□ -0.42
EWSR1-221ENST00000610553 BEX4Q9NWD9 120 aaPredicted RBP12.4□□□□□ -0.42
EWSR1-221ENST00000610553 NAV2Q8IVL1 2488 aa12.4□□□□□ -0.42
EWSR1-221ENST00000610553 TRBV10-2A0A0K0K1G8 114 aa12.4□□□□□ -0.42
EWSR1-221ENST00000610553 RPL13AP40429 203 aaKnown RBP12.4□□□□□ -0.42
EWSR1-221ENST00000610553 DUX3Q96PT4 197 aa12.4□□□□□ -0.42
EWSR1-221ENST00000610553 ICOSQ9Y6W8 199 aa12.4□□□□□ -0.42
EWSR1-221ENST00000610553 DSCR9P59020 149 aa12.39□□□□□ -0.43
EWSR1-221ENST00000610553 A8MZ25 164 aa12.39□□□□□ -0.43
EWSR1-221ENST00000610553 ZNF415Q09FC8 603 aa12.39□□□□□ -0.43
EWSR1-221ENST00000610553 ZFAND6Q6FIF0 208 aa12.39□□□□□ -0.43
EWSR1-221ENST00000610553 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.38□□□□□ -0.43
EWSR1-221ENST00000610553 A0A096LNT2 108 aa12.38□□□□□ -0.43
EWSR1-221ENST00000610553 IGKV2-29A2NJV5 120 aaPredicted RBP12.38□□□□□ -0.43
EWSR1-221ENST00000610553 RNF183Q96D59 192 aa12.38□□□□□ -0.43
EWSR1-221ENST00000610553 LINC00467Q9BRT7 94 aa12.38□□□□□ -0.43
EWSR1-221ENST00000610553 TEX49A0A1B0GTD5 131 aa12.37□□□□□ -0.43
EWSR1-221ENST00000610553 J3QLI3 93 aa12.37□□□□□ -0.43
EWSR1-221ENST00000610553 SLURP1P55000 103 aa12.37□□□□□ -0.43
EWSR1-221ENST00000610553 DEFB136Q30KP8 78 aa12.37□□□□□ -0.43
EWSR1-221ENST00000610553 TMEM61Q8N0U2 210 aa12.37□□□□□ -0.43
EWSR1-221ENST00000610553 C11orf72Q8NBR9 251 aa12.37□□□□□ -0.43
EWSR1-221ENST00000610553 MXRA5Q9NR99 2828 aa12.37□□□□□ -0.43
EWSR1-221ENST00000610553 APCP25054 2843 aa12.36□□□□□ -0.43
EWSR1-221ENST00000610553 IGHV3-53P01767 116 aa12.36□□□□□ -0.43
EWSR1-221ENST00000610553 CLUHP3Q96NS8 147 aa12.36□□□□□ -0.43
EWSR1-221ENST00000610553 TIMM17BO60830 172 aa12.36□□□□□ -0.43
EWSR1-221ENST00000610553 Q6ZSV7 163 aa12.36□□□□□ -0.43
EWSR1-221ENST00000610553 C18orf65Q6ZTR6 163 aa12.36□□□□□ -0.43
EWSR1-221ENST00000610553 TEX29Q8N6K0 151 aa12.35□□□□□ -0.43
EWSR1-221ENST00000610553 DNAJC30Q96LL9 226 aa12.35□□□□□ -0.43
EWSR1-221ENST00000610553 IGLV5-45A0A087WSX0 123 aa12.34□□□□□ -0.43
EWSR1-221ENST00000610553 NPC2P61916 151 aa12.34□□□□□ -0.43
EWSR1-221ENST00000610553 IGHV3-38A0A0C4DH36 116 aa12.34□□□□□ -0.43
EWSR1-221ENST00000610553 H7C423 109 aa12.34□□□□□ -0.43
EWSR1-221ENST00000610553 Q6YL49 198 aa12.34□□□□□ -0.43
EWSR1-221ENST00000610553 UBE2WQ96B02 151 aa12.34□□□□□ -0.43
EWSR1-221ENST00000610553 YAE1D1Q9NRH1 226 aa12.34□□□□□ -0.43
EWSR1-221ENST00000610553 CDKN2A-AS1Q9UH64 79 aa12.34□□□□□ -0.43
EWSR1-221ENST00000610553 HELZ2Q9BYK8 2649 aaKnown RBP12.34□□□□□ -0.43
EWSR1-221ENST00000610553 FSHBP01225 129 aa12.33□□□□□ -0.44
EWSR1-221ENST00000610553 COX6CP09669 75 aa12.33□□□□□ -0.44
EWSR1-221ENST00000610553 BEAN1Q3B7T3 259 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms