RNA–Protein interactions for RNA: ENST00000610538.4

TP53-219, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-219ENST00000610538 C20orf78Q9BR46 151 aa8.85□□□□□ -0.99
TP53-219ENST00000610538 PLAC8L1A1L4L8 177 aa8.84□□□□□ -0.99
TP53-219ENST00000610538 VPS25Q9BRG1 176 aa8.84□□□□□ -0.99
TP53-219ENST00000610538 LGALS9BQ3B8N2 356 aa8.84□□□□□ -0.99
TP53-219ENST00000610538 LGALS9CQ6DKI2 356 aa8.84□□□□□ -0.99
TP53-219ENST00000610538 DGAT2L7PQ6IED9 249 aa8.84□□□□□ -0.99
TP53-219ENST00000610538 TRAV8-6A0A0B4J262 113 aa8.83□□□□□ -1
TP53-219ENST00000610538 A6NDN8 102 aa8.83□□□□□ -1
TP53-219ENST00000610538 IGHV4-30-4P0DP06 118 aa8.83□□□□□ -1
TP53-219ENST00000610538 TCTAP57738 103 aa8.83□□□□□ -1
TP53-219ENST00000610538 IFI27L1Q96BM0 104 aa8.83□□□□□ -1
TP53-219ENST00000610538 TRGV2A0A075B6R0 118 aa8.83□□□□□ -1
TP53-219ENST00000610538 POLR2KP53803 58 aaKnown RBP8.83□□□□□ -1
TP53-219ENST00000610538 UFSP1Q6NVU6 142 aa8.83□□□□□ -1
TP53-219ENST00000610538 G3V4G9 280 aa8.82□□□□□ -1
TP53-219ENST00000610538 DEFB130BP0DP73 79 aa8.82□□□□□ -1
TP53-219ENST00000610538 DEFB130AP0DP74 79 aa8.82□□□□□ -1
TP53-219ENST00000610538 KRTAP3-3Q9BYR6 98 aa8.82□□□□□ -1
TP53-219ENST00000610538 KRTAP3-2Q9BYR7 98 aa8.82□□□□□ -1
TP53-219ENST00000610538 IGHV3-38A0A0C4DH36 116 aa8.82□□□□□ -1
TP53-219ENST00000610538 LINC01546A6NGU7 62 aa8.82□□□□□ -1
TP53-219ENST00000610538 K7ERU9 68 aa8.82□□□□□ -1
TP53-219ENST00000610538 PPP1R17O96001 155 aa8.82□□□□□ -1
TP53-219ENST00000610538 PRSS1P07477 247 aa8.82□□□□□ -1
TP53-219ENST00000610538 FGF6P10767 208 aa8.82□□□□□ -1
TP53-219ENST00000610538 GTF2H5Q6ZYL4 71 aa8.82□□□□□ -1
TP53-219ENST00000610538 IL17DQ8TAD2 202 aa8.82□□□□□ -1
TP53-219ENST00000610538 C16orf74Q96GX8 76 aa8.82□□□□□ -1
TP53-219ENST00000610538 GAGE10A6NGK3 116 aa8.81□□□□□ -1
TP53-219ENST00000610538 H3BRM9 83 aa8.81□□□□□ -1
TP53-219ENST00000610538 VCYO14598 125 aa8.81□□□□□ -1
TP53-219ENST00000610538 RPL39P62891 51 aaKnown RBP8.81□□□□□ -1
TP53-219ENST00000610538 KIR2DL4Q99706 377 aa8.81□□□□□ -1
TP53-219ENST00000610538 PRB2P02812 416 aaPredicted RBP8.81□□□□□ -1
TP53-219ENST00000610538 BOD1L2Q8IYS8 172 aa8.81□□□□□ -1
TP53-219ENST00000610538 PHLDA1Q8WV24 401 aaPredicted RBP8.81□□□□□ -1
TP53-219ENST00000610538 SIVA1O15304 175 aa8.8□□□□□ -1
TP53-219ENST00000610538 RS1O15537 224 aa8.8□□□□□ -1
TP53-219ENST00000610538 HSD52Q0P140 79 aa8.8□□□□□ -1
TP53-219ENST00000610538 TNFRSF18Q9Y5U5 241 aa8.8□□□□□ -1
TP53-219ENST00000610538 TENM3Q9P273 2699 aa8.8□□□□□ -1
TP53-219ENST00000610538 C9orf118A6NHY6 69 aa8.8□□□□□ -1
TP53-219ENST00000610538 DAZ2Q13117 558 aaKnown RBP8.8□□□□□ -1
TP53-219ENST00000610538 C2orf66Q6UXQ4 117 aa8.8□□□□□ -1
TP53-219ENST00000610538 ZFP2Q6ZN57 461 aa8.8□□□□□ -1
TP53-219ENST00000610538 DKK2Q9UBU2 259 aa8.8□□□□□ -1
TP53-219ENST00000610538 TRBV27A0A0K0K1C4 114 aa8.79□□□□□ -1
TP53-219ENST00000610538 WIPF1O43516 503 aa8.79□□□□□ -1
TP53-219ENST00000610538 ORMDL2Q53FV1 153 aa8.79□□□□□ -1
TP53-219ENST00000610538 OR11H2Q8NH07 326 aa8.79□□□□□ -1
TP53-219ENST00000610538 H7C1H1 209 aa8.79□□□□□ -1
TP53-219ENST00000610538 SCGB3A1Q96QR1 104 aa8.79□□□□□ -1
TP53-219ENST00000610538 TRBV6-5A0A0K0K1A5 114 aa8.78□□□□□ -1
TP53-219ENST00000610538 PIK3CD-AS1Q5SR53 167 aa8.78□□□□□ -1
TP53-219ENST00000610538 NEXN-AS1Q8NBZ9 246 aa8.78□□□□□ -1
TP53-219ENST00000610538 TP53TG1Q9Y2A0 90 aa8.78□□□□□ -1
TP53-219ENST00000610538 RHODO00212 210 aa8.78□□□□□ -1
TP53-219ENST00000610538 APOC4P55056 127 aa8.78□□□□□ -1
TP53-219ENST00000610538 ZC2HC1BQ5TFG8 222 aa8.78□□□□□ -1
TP53-219ENST00000610538 SLC25A29Q8N8R3 303 aa8.78□□□□□ -1
TP53-219ENST00000610538 ZNRF2Q8NHG8 242 aa8.78□□□□□ -1
TP53-219ENST00000610538 PTH2Q96A98 100 aa8.78□□□□□ -1
TP53-219ENST00000610538 H3BUT2 72 aa8.77□□□□□ -1.01
TP53-219ENST00000610538 I3L3M4 83 aa8.77□□□□□ -1.01
TP53-219ENST00000610538 TSHBP01222 138 aa8.77□□□□□ -1.01
TP53-219ENST00000610538 TOMM6Q96B49 74 aa8.77□□□□□ -1.01
TP53-219ENST00000610538 OPRPNQ99935 248 aaPredicted RBP8.77□□□□□ -1.01
TP53-219ENST00000610538 LOC100131303A0A0U1RQF7 123 aa8.76□□□□□ -1.01
TP53-219ENST00000610538 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.76□□□□□ -1.01
TP53-219ENST00000610538 K7EP34 96 aa8.76□□□□□ -1.01
TP53-219ENST00000610538 NMUP48645 174 aa8.76□□□□□ -1.01
TP53-219ENST00000610538 TRAV4A0A0B4J268 109 aa8.76□□□□□ -1.01
TP53-219ENST00000610538 KIR2DL5BQ8NHK3 375 aa8.76□□□□□ -1.01
TP53-219ENST00000610538 OVOL2Q9BRP0 275 aa8.76□□□□□ -1.01
TP53-219ENST00000610538 TRGV4A0A0C4DH28 118 aa8.75□□□□□ -1.01
TP53-219ENST00000610538 GAGE12JA6NER3 117 aa8.75□□□□□ -1.01
TP53-219ENST00000610538 GAGE4Q13068 117 aa8.75□□□□□ -1.01
TP53-219ENST00000610538 GAGE5Q13069 117 aa8.75□□□□□ -1.01
TP53-219ENST00000610538 GAGE13Q4V321 117 aa8.75□□□□□ -1.01
TP53-219ENST00000610538 FAM222AQ5U5X8 452 aa8.75□□□□□ -1.01
TP53-219ENST00000610538 CYSLTR1Q9Y271 337 aa8.75□□□□□ -1.01
TP53-219ENST00000610538 IGHV4-28A0A0C4DH34 117 aa8.75□□□□□ -1.01
TP53-219ENST00000610538 ATP5LO75964 103 aa8.75□□□□□ -1.01
TP53-219ENST00000610538 CEMP1Q6PRD7 247 aaPredicted RBP8.75□□□□□ -1.01
TP53-219ENST00000610538 RETNQ9HD89 108 aa8.75□□□□□ -1.01
TP53-219ENST00000610538 RPL32P62910 135 aaKnown RBP8.74□□□□□ -1.01
TP53-219ENST00000610538 PCP2Q8IVA1 136 aa8.74□□□□□ -1.01
TP53-219ENST00000610538 OR5A1Q8NGJ0 315 aa8.74□□□□□ -1.01
TP53-219ENST00000610538 RAB37Q96AX2 223 aa8.74□□□□□ -1.01
TP53-219ENST00000610538 MRPL35Q9NZE8 188 aaKnown RBP8.74□□□□□ -1.01
TP53-219ENST00000610538 K7EMI3 77 aa8.73□□□□□ -1.01
TP53-219ENST00000610538 K7EQD1 137 aa8.73□□□□□ -1.01
TP53-219ENST00000610538 EGFEM1PQ0D2K5 195 aa8.73□□□□□ -1.01
TP53-219ENST00000610538 TRBV7-3A0A075B6L6 115 aa8.73□□□□□ -1.01
TP53-219ENST00000610538 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.72□□□□□ -1.01
TP53-219ENST00000610538 A0A1W2PPM0 123 aa8.72□□□□□ -1.01
TP53-219ENST00000610538 IGKV2-29A2NJV5 120 aaPredicted RBP8.72□□□□□ -1.01
TP53-219ENST00000610538 RNASE13Q5GAN3 156 aaKnown RBP8.72□□□□□ -1.01
TP53-219ENST00000610538 BAALCQ8WXS3 180 aa8.72□□□□□ -1.01
TP53-219ENST00000610538 NAA38Q9BRA0 125 aaKnown RBP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms