RNA–Protein interactions for RNA: ENST00000609024.5

CHMP4A-211, Transcript of charged multivesicular body protein 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4A, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-211ENST00000609024 FAM231BA6NCW3 169 aa10.8□□□□□ -0.68
CHMP4A-211ENST00000609024 CHCHD10Q8WYQ3 142 aaPredicted RBP10.79□□□□□ -0.68
CHMP4A-211ENST00000609024 NIT2Q9NQR4 276 aa10.79□□□□□ -0.68
CHMP4A-211ENST00000609024 CACNG7P62955 275 aa10.78□□□□□ -0.68
CHMP4A-211ENST00000609024 FER1L6-AS1Q8NA97 138 aa10.78□□□□□ -0.68
CHMP4A-211ENST00000609024 MLST8Q9BVC4 326 aa10.78□□□□□ -0.68
CHMP4A-211ENST00000609024 GVQW2A0A096LPI5 108 aaPredicted RBP10.77□□□□□ -0.69
CHMP4A-211ENST00000609024 SCO2A0A1W2PP80 73 aa10.77□□□□□ -0.69
CHMP4A-211ENST00000609024 TRGC1P0CF51 173 aa10.77□□□□□ -0.69
CHMP4A-211ENST00000609024 RPS20P60866 119 aaKnown RBP10.77□□□□□ -0.69
CHMP4A-211ENST00000609024 SRSF9Q13242 221 aaKnown RBP eCLIP10.77□□□□□ -0.69
CHMP4A-211ENST00000609024 RNASEKQ6P5S7 137 aaKnown RBP10.77□□□□□ -0.69
CHMP4A-211ENST00000609024 Q5BKY6 102 aa10.75□□□□□ -0.69
CHMP4A-211ENST00000609024 SFT2D1Q8WV19 159 aa10.75□□□□□ -0.69
CHMP4A-211ENST00000609024 CARD19Q96LW7 228 aa10.75□□□□□ -0.69
CHMP4A-211ENST00000609024 A0A1B0GV50 99 aa10.74□□□□□ -0.69
CHMP4A-211ENST00000609024 XKRY2A2RUG3 117 aa10.74□□□□□ -0.69
CHMP4A-211ENST00000609024 GIPP09681 153 aaPredicted RBP10.74□□□□□ -0.69
CHMP4A-211ENST00000609024 TMUB2Q71RG4 321 aa10.74□□□□□ -0.69
CHMP4A-211ENST00000609024 OR2D3Q8NGH3 330 aa10.74□□□□□ -0.69
CHMP4A-211ENST00000609024 F2Z2F3 143 aa10.73□□□□□ -0.69
CHMP4A-211ENST00000609024 ZNF664Q8N3J9 261 aa10.73□□□□□ -0.69
CHMP4A-211ENST00000609024 TRAV26-2A0A0B4J265 109 aa10.72□□□□□ -0.69
CHMP4A-211ENST00000609024 IGHV1-58A0A0C4DH39 117 aa10.72□□□□□ -0.69
CHMP4A-211ENST00000609024 ZNF561-AS1K7EIQ3 104 aa10.72□□□□□ -0.69
CHMP4A-211ENST00000609024 IGLC6P0CF74 106 aa10.71□□□□□ -0.69
CHMP4A-211ENST00000609024 RPL35P42766 123 aaKnown RBP10.71□□□□□ -0.69
CHMP4A-211ENST00000609024 XCL1P47992 114 aa10.71□□□□□ -0.69
CHMP4A-211ENST00000609024 KCNRGQ8N5I3 272 aa10.71□□□□□ -0.69
CHMP4A-211ENST00000609024 FAM213BQ8TBF2 198 aa10.71□□□□□ -0.69
CHMP4A-211ENST00000609024 BTF3L4Q96K17 158 aa10.71□□□□□ -0.69
CHMP4A-211ENST00000609024 A0A0U1RQV1 116 aa10.7□□□□□ -0.7
CHMP4A-211ENST00000609024 H7C423 109 aa10.7□□□□□ -0.7
CHMP4A-211ENST00000609024 APCSP02743 223 aa10.7□□□□□ -0.7
CHMP4A-211ENST00000609024 MT-ND6P03923 174 aa10.7□□□□□ -0.7
CHMP4A-211ENST00000609024 GAGE2BQ13066 116 aa10.7□□□□□ -0.7
CHMP4A-211ENST00000609024 LINC00526Q96FQ7 95 aa10.7□□□□□ -0.7
CHMP4A-211ENST00000609024 TMEM101Q96IK0 257 aa10.7□□□□□ -0.7
CHMP4A-211ENST00000609024 IFNA1P01562 189 aa10.69□□□□□ -0.7
CHMP4A-211ENST00000609024 SYCNQ0VAF6 134 aa10.69□□□□□ -0.7
CHMP4A-211ENST00000609024 FOXI1Q12951 378 aa10.69□□□□□ -0.7
CHMP4A-211ENST00000609024 ISOC2Q96AB3 205 aa10.69□□□□□ -0.7
CHMP4A-211ENST00000609024 PSORS1C2Q9UIG4 136 aa10.69□□□□□ -0.7
CHMP4A-211ENST00000609024 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.68□□□□□ -0.7
CHMP4A-211ENST00000609024 IGKV2-29A2NJV5 120 aaPredicted RBP10.68□□□□□ -0.7
CHMP4A-211ENST00000609024 ARPC5O15511 151 aa10.68□□□□□ -0.7
CHMP4A-211ENST00000609024 NCR2O95944 276 aa10.68□□□□□ -0.7
CHMP4A-211ENST00000609024 FGF6P10767 208 aa10.68□□□□□ -0.7
CHMP4A-211ENST00000609024 NTF3P20783 257 aa10.68□□□□□ -0.7
CHMP4A-211ENST00000609024 OR5A1Q8NGJ0 315 aa10.68□□□□□ -0.7
CHMP4A-211ENST00000609024 LOC107984640A0A0U1RRK4 108 aa10.67□□□□□ -0.7
CHMP4A-211ENST00000609024 CCL25O15444 150 aa10.67□□□□□ -0.7
CHMP4A-211ENST00000609024 ZNF25P17030 456 aaPredicted RBP10.67□□□□□ -0.7
CHMP4A-211ENST00000609024 PTTG1IPP53801 180 aa10.67□□□□□ -0.7
CHMP4A-211ENST00000609024 SS18Q15532 418 aa10.67□□□□□ -0.7
CHMP4A-211ENST00000609024 TWIST1Q15672 202 aa10.67□□□□□ -0.7
CHMP4A-211ENST00000609024 LYZL1Q6UWQ5 148 aa10.67□□□□□ -0.7
CHMP4A-211ENST00000609024 MBD3L1Q8WWY6 194 aa10.67□□□□□ -0.7
CHMP4A-211ENST00000609024 UMAD1C9J7I0 102 aa10.66□□□□□ -0.7
CHMP4A-211ENST00000609024 CENPWQ5EE01 88 aa10.66□□□□□ -0.7
CHMP4A-211ENST00000609024 Q6ZNX1 250 aa10.66□□□□□ -0.7
CHMP4A-211ENST00000609024 SMIM15Q7Z3B0 74 aa10.66□□□□□ -0.7
CHMP4A-211ENST00000609024 H2AFB1P0C5Y9 115 aa10.65□□□□□ -0.7
CHMP4A-211ENST00000609024 GNG4P50150 75 aa10.65□□□□□ -0.7
CHMP4A-211ENST00000609024 C1orf137Q5JT78 98 aa10.65□□□□□ -0.7
CHMP4A-211ENST00000609024 CYTL1Q9NRR1 136 aa10.65□□□□□ -0.7
CHMP4A-211ENST00000609024 LINC00959A0A1B0GUT2 108 aa10.64□□□□□ -0.71
CHMP4A-211ENST00000609024 MALP21145 153 aa10.64□□□□□ -0.71
CHMP4A-211ENST00000609024 CAMPP49913 170 aa10.64□□□□□ -0.71
CHMP4A-211ENST00000609024 EIF5AP63241 154 aaKnown RBP10.64□□□□□ -0.71
CHMP4A-211ENST00000609024 EIF5AL1Q6IS14 154 aaKnown RBP10.64□□□□□ -0.71
CHMP4A-211ENST00000609024 BIN3Q9NQY0 253 aa10.64□□□□□ -0.71
CHMP4A-211ENST00000609024 LPAP08519 4548 aa10.64□□□□□ -0.71
CHMP4A-211ENST00000609024 GATD1Q8NB37 220 aa10.63□□□□□ -0.71
CHMP4A-211ENST00000609024 DIRC1Q969H9 104 aa10.63□□□□□ -0.71
CHMP4A-211ENST00000609024 MANBALQ9NQG1 85 aa10.63□□□□□ -0.71
CHMP4A-211ENST00000609024 C19orf71A6NCJ1 209 aa10.62□□□□□ -0.71
CHMP4A-211ENST00000609024 PMCHP20382 165 aa10.62□□□□□ -0.71
CHMP4A-211ENST00000609024 TEX261Q6UWH6 196 aa10.62□□□□□ -0.71
CHMP4A-211ENST00000609024 PRR26Q8N8Z3 221 aa10.62□□□□□ -0.71
CHMP4A-211ENST00000609024 GNG13Q9P2W3 67 aa10.62□□□□□ -0.71
CHMP4A-211ENST00000609024 IGLV4-69A0A075B6H9 119 aa10.61□□□□□ -0.71
CHMP4A-211ENST00000609024 PRR4Q16378 134 aa10.61□□□□□ -0.71
CHMP4A-211ENST00000609024 CD164L2Q6UWJ8 174 aa10.61□□□□□ -0.71
CHMP4A-211ENST00000609024 C9orf62Q8N4C0 152 aa10.61□□□□□ -0.71
CHMP4A-211ENST00000609024 SMIM12Q96EX1 92 aa10.61□□□□□ -0.71
CHMP4A-211ENST00000609024 SDHAF1A6NFY7 115 aa10.6□□□□□ -0.71
CHMP4A-211ENST00000609024 I3L3M4 83 aa10.6□□□□□ -0.71
CHMP4A-211ENST00000609024 BCL2P10415 239 aa10.6□□□□□ -0.71
CHMP4A-211ENST00000609024 RPL18AQ02543 176 aaKnown RBP10.6□□□□□ -0.71
CHMP4A-211ENST00000609024 C9orf116Q5BN46 136 aaPredicted RBP10.6□□□□□ -0.71
CHMP4A-211ENST00000609024 C11orf52Q96A22 123 aa10.6□□□□□ -0.71
CHMP4A-211ENST00000609024 RPL39LQ96EH5 51 aaKnown RBP10.6□□□□□ -0.71
CHMP4A-211ENST00000609024 CAMK2N2Q96S95 79 aa10.6□□□□□ -0.71
CHMP4A-211ENST00000609024 KRTAP9-2Q9BYQ4 174 aa10.6□□□□□ -0.71
CHMP4A-211ENST00000609024 A0A1W2PNN7 141 aa10.59□□□□□ -0.71
CHMP4A-211ENST00000609024 CTRLP40313 264 aa10.59□□□□□ -0.71
CHMP4A-211ENST00000609024 MRAP2Q96G30 205 aa10.59□□□□□ -0.71
CHMP4A-211ENST00000609024 RAB19A4D1S5 217 aa10.58□□□□□ -0.72
CHMP4A-211ENST00000609024 APOMO95445 188 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms