RNA–Protein interactions for RNA: ENST00000608903.5

CTCFL-221, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-221ENST00000608903 ZNF479Q96JC4 524 aa8.2□□□□□ -1.1
CTCFL-221ENST00000608903 AP1S3Q96PC3 154 aa8.2□□□□□ -1.1
CTCFL-221ENST00000608903 MAP1LC3AQ9H492 121 aa8.2□□□□□ -1.1
CTCFL-221ENST00000608903 Q9UF83 564 aa8.2□□□□□ -1.1
CTCFL-221ENST00000608903 PRKDCP78527 4128 aaKnown RBP8.2□□□□□ -1.1
CTCFL-221ENST00000608903 IGHV3-53P01767 116 aa8.2□□□□□ -1.1
CTCFL-221ENST00000608903 FAM74A4Q5TZK3 123 aa8.2□□□□□ -1.1
CTCFL-221ENST00000608903 BOD1L2Q8IYS8 172 aa8.2□□□□□ -1.1
CTCFL-221ENST00000608903 SPATA25Q9BR10 227 aa8.2□□□□□ -1.1
CTCFL-221ENST00000608903 DPH3P1Q9H4G8 78 aa8.2□□□□□ -1.1
CTCFL-221ENST00000608903 DEFB130BP0DP73 79 aa8.19□□□□□ -1.1
CTCFL-221ENST00000608903 DEFB130AP0DP74 79 aa8.19□□□□□ -1.1
CTCFL-221ENST00000608903 SMIM15Q7Z3B0 74 aa8.19□□□□□ -1.1
CTCFL-221ENST00000608903 B9D2Q9BPU9 175 aa8.19□□□□□ -1.1
CTCFL-221ENST00000608903 MGPP08493 103 aa8.18□□□□□ -1.1
CTCFL-221ENST00000608903 MEGF8Q7Z7M0 2845 aa8.18□□□□□ -1.1
CTCFL-221ENST00000608903 A0A0J9YWU9 116 aa8.18□□□□□ -1.1
CTCFL-221ENST00000608903 A8MWV9 139 aa8.18□□□□□ -1.1
CTCFL-221ENST00000608903 HBDP02042 147 aa8.18□□□□□ -1.1
CTCFL-221ENST00000608903 SUMO4Q6EEV6 95 aa8.18□□□□□ -1.1
CTCFL-221ENST00000608903 LYRM9A8MSI8 78 aa8.17□□□□□ -1.1
CTCFL-221ENST00000608903 H3BRM9 83 aa8.17□□□□□ -1.1
CTCFL-221ENST00000608903 SIVA1O15304 175 aa8.17□□□□□ -1.1
CTCFL-221ENST00000608903 HSD52Q0P140 79 aa8.17□□□□□ -1.1
CTCFL-221ENST00000608903 Q8N8P6 123 aa8.17□□□□□ -1.1
CTCFL-221ENST00000608903 NXT2Q9NPJ8 142 aaKnown RBP8.17□□□□□ -1.1
CTCFL-221ENST00000608903 TRAV4A0A0B4J268 109 aa8.17□□□□□ -1.1
CTCFL-221ENST00000608903 A6NDN8 102 aa8.17□□□□□ -1.1
CTCFL-221ENST00000608903 C9orf118A6NHY6 69 aa8.17□□□□□ -1.1
CTCFL-221ENST00000608903 P0DMU3 169 aa8.17□□□□□ -1.1
CTCFL-221ENST00000608903 FAM231AP0DMU4 169 aa8.17□□□□□ -1.1
CTCFL-221ENST00000608903 FAM231CP0DMU5 169 aa8.17□□□□□ -1.1
CTCFL-221ENST00000608903 RPL39LQ96EH5 51 aaKnown RBP8.17□□□□□ -1.1
CTCFL-221ENST00000608903 MRAP2Q96G30 205 aa8.17□□□□□ -1.1
CTCFL-221ENST00000608903 TRGV2A0A075B6R0 118 aa8.16□□□□□ -1.1
CTCFL-221ENST00000608903 C12orf74Q32Q52 190 aa8.16□□□□□ -1.1
CTCFL-221ENST00000608903 VPS25Q9BRG1 176 aa8.16□□□□□ -1.1
CTCFL-221ENST00000608903 C11orf68Q9H3H3 251 aaKnown RBP8.16□□□□□ -1.1
CTCFL-221ENST00000608903 K7ERU9 68 aa8.15□□□□□ -1.1
CTCFL-221ENST00000608903 M0QY20 66 aa8.15□□□□□ -1.1
CTCFL-221ENST00000608903 SMIM17P0DL12 118 aa8.15□□□□□ -1.1
CTCFL-221ENST00000608903 FCER1GP30273 86 aa8.15□□□□□ -1.1
CTCFL-221ENST00000608903 FHL2Q14192 279 aa8.15□□□□□ -1.1
CTCFL-221ENST00000608903 IFI27L1Q96BM0 104 aa8.15□□□□□ -1.1
CTCFL-221ENST00000608903 C18orf15Q96N68 181 aa8.15□□□□□ -1.1
CTCFL-221ENST00000608903 GAGE10A6NGK3 116 aa8.15□□□□□ -1.11
CTCFL-221ENST00000608903 F5H697 171 aa8.15□□□□□ -1.11
CTCFL-221ENST00000608903 SPART-AS1P0CW21 52 aa8.15□□□□□ -1.11
CTCFL-221ENST00000608903 ZNF56Q15929 161 aa8.15□□□□□ -1.11
CTCFL-221ENST00000608903 ZFP2Q6ZN57 461 aa8.15□□□□□ -1.11
CTCFL-221ENST00000608903 COL7A1Q02388 2944 aa8.14□□□□□ -1.11
CTCFL-221ENST00000608903 K7EP34 96 aa8.14□□□□□ -1.11
CTCFL-221ENST00000608903 GTF2H5Q6ZYL4 71 aa8.14□□□□□ -1.11
CTCFL-221ENST00000608903 DAD1P61803 113 aa8.14□□□□□ -1.11
CTCFL-221ENST00000608903 SMIM2Q9BVW6 85 aa8.14□□□□□ -1.11
CTCFL-221ENST00000608903 ZMAT4Q9H898 229 aa8.13□□□□□ -1.11
CTCFL-221ENST00000608903 LOC100131303A0A0U1RQF7 123 aa8.12□□□□□ -1.11
CTCFL-221ENST00000608903 H3BUT2 72 aa8.12□□□□□ -1.11
CTCFL-221ENST00000608903 RHODO00212 210 aa8.12□□□□□ -1.11
CTCFL-221ENST00000608903 NANOS2P60321 138 aaKnown RBP8.12□□□□□ -1.11
CTCFL-221ENST00000608903 SUMO2P61956 95 aaKnown RBP8.12□□□□□ -1.11
CTCFL-221ENST00000608903 LAGE3Q14657 143 aa8.12□□□□□ -1.11
CTCFL-221ENST00000608903 PCP2Q8IVA1 136 aa8.12□□□□□ -1.11
CTCFL-221ENST00000608903 SLC25A29Q8N8R3 303 aa8.12□□□□□ -1.11
CTCFL-221ENST00000608903 EDA2RQ9HAV5 297 aa8.12□□□□□ -1.11
CTCFL-221ENST00000608903 Q6ZTC4 211 aa8.11□□□□□ -1.11
CTCFL-221ENST00000608903 NEGR1Q7Z3B1 354 aa8.11□□□□□ -1.11
CTCFL-221ENST00000608903 NEXN-AS1Q8NBZ9 246 aa8.11□□□□□ -1.11
CTCFL-221ENST00000608903 DEFB104AQ8WTQ1 72 aa8.11□□□□□ -1.11
CTCFL-221ENST00000608903 C20orf78Q9BR46 151 aa8.11□□□□□ -1.11
CTCFL-221ENST00000608903 A0A1W2PPM0 123 aa8.11□□□□□ -1.11
CTCFL-221ENST00000608903 NMUP48645 174 aa8.11□□□□□ -1.11
CTCFL-221ENST00000608903 TCTAP57738 103 aa8.11□□□□□ -1.11
CTCFL-221ENST00000608903 ODF1Q14990 250 aa8.11□□□□□ -1.11
CTCFL-221ENST00000608903 HIGD1BQ9P298 99 aa8.11□□□□□ -1.11
CTCFL-221ENST00000608903 TRGV4A0A0C4DH28 118 aa8.1□□□□□ -1.11
CTCFL-221ENST00000608903 OR5A1Q8NGJ0 315 aa8.1□□□□□ -1.11
CTCFL-221ENST00000608903 VSIG2Q96IQ7 327 aa8.1□□□□□ -1.11
CTCFL-221ENST00000608903 K7EQD1 137 aa8.09□□□□□ -1.11
CTCFL-221ENST00000608903 CRYBA4P53673 196 aa8.09□□□□□ -1.11
CTCFL-221ENST00000608903 POLR2KP53803 58 aaKnown RBP8.09□□□□□ -1.11
CTCFL-221ENST00000608903 C11orf45Q8TAV5 145 aa8.09□□□□□ -1.11
CTCFL-221ENST00000608903 NAA38Q9BRA0 125 aaKnown RBP8.09□□□□□ -1.11
CTCFL-221ENST00000608903 HHLA3Q9XRX5 114 aa8.09□□□□□ -1.11
CTCFL-221ENST00000608903 IGKV2D-26A0A0A0MRZ7 120 aa8.09□□□□□ -1.11
CTCFL-221ENST00000608903 TRBV6-5A0A0K0K1A5 114 aa8.09□□□□□ -1.11
CTCFL-221ENST00000608903 ATP5G1P05496 136 aa8.09□□□□□ -1.11
CTCFL-221ENST00000608903 HTN3P15516 51 aa8.09□□□□□ -1.11
CTCFL-221ENST00000608903 FBN3Q75N90 2809 aa8.08□□□□□ -1.12
CTCFL-221ENST00000608903 TRBV6-4A0A1B0GX49 114 aa8.08□□□□□ -1.12
CTCFL-221ENST00000608903 F5H768 121 aa8.08□□□□□ -1.12
CTCFL-221ENST00000608903 CIDEAO60543 219 aa8.08□□□□□ -1.12
CTCFL-221ENST00000608903 NHLRC4P0CG21 123 aaPredicted RBP8.08□□□□□ -1.12
CTCFL-221ENST00000608903 SPCS1Q9Y6A9 102 aa8.08□□□□□ -1.12
CTCFL-221ENST00000608903 A0A0J9YY99 117 aa8.08□□□□□ -1.12
CTCFL-221ENST00000608903 TEX48A0A1B0GUV7 120 aa8.08□□□□□ -1.12
CTCFL-221ENST00000608903 RAB37Q96AX2 223 aa8.08□□□□□ -1.12
CTCFL-221ENST00000608903 STAB2Q8WWQ8 2551 aa8.07□□□□□ -1.12
CTCFL-221ENST00000608903 GAGE12JA6NER3 117 aa8.07□□□□□ -1.12
CTCFL-221ENST00000608903 SDHAF1A6NFY7 115 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 178.5 ms